Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G04240.1
CDS Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr3:1114187-1120722 REVERSE LENGTH=2934 \| 201606
Sequence	ATGATCTCGTCCAAAAACGGAGCTGCCATGATCTCCCGACCTGTCTTTCTTTCCGATCGA GTTGATGAAGTCTTCTCTAGAAAGCTTGATTTGTCTGTCTCTTCTTCGTCTTCTTCGAGC CTCCTCCAGCAGTTCAATAAGACTCATGAAGGTGATGATGACGCACGCCTGGCTCTTGCT CATCAGCTATACAAAGGAGGCGATTTCAAACAAGCCCTGGAGCACAGCAACATGGTTTAC CAGAGAAACCCATTACGCACTGATAATCTTCTTCTAATTGGTGCTATTTATTACCAGCTT CAAGAGTATGATATGTGCATAGCTCGAAATGAAGAAGCTCTTCGTATTCAACCTCAGTTT GCTGAGTGTTATGGAAACATGGCAAACGCGTGGAAGGAAAAAGGGGACACTGATCGTGCA ATCCGCTACTATTTAATTGCAATTGAGCTGAGGCCCAATTTTGCTGATGCTTGGTCGAAC TTGGCAAGTGCATACATGCGAAAGGGAAGACTCAGTGAGGCAACACAATGCTGTCAGCAG GCCCTCTCATTGAATCCACTTCTGGTTGACGCACATAGTAATCTGGGGAATCTGATGAAG GCTCAAGGATTGATTCATGAAGCATACAGTTGTTACCTTGAAGCTGTTCGTATACAACCA ACATTTGCTATTGCATGGTCGAATCTTGCTGGTCTTTTCATGGAGTCAGGTGATCTCAAC AGAGCCCTTCAATACTACAAGGAAGCTGTGAAGTTGAAACCTGCATTCCCTGATGCATAT TTAAATTTAGGAAACGTGTATAAGGCCCTCGGGAGACCTACTGAAGCGATCATGTGTTAT CAGCATGCCTTACAGATGCGGCCAAATTCTGCAATGGCATTTGGGAATATAGCCAGTATA TACTATGAGCAAGGTCAACTAGATTTAGCAATTCGACACTACAAGCAGGCTCTCTCCCGG GATCCACGATTTTTGGAGGCTTACAATAACTTGGGTAATGCATTGAAGGATATTGGGCGA GTTGATGAAGCAGTTCGGTGTTATAATCAATGTCTTGCTTTACAACCAAATCATCCACAA GCCATGGCTAATCTTGGAAACATTTATATGGAGTGGAATATGATGGGTCCTGCTTCCTCA TTATTCAAGGCTACTCTGGCTGTAACTACAGGGCTATCTGCTCCGTTCAATAACCTTGCT ATAATTTACAAGCAACAGGGAAATTACTCGGATGCTATATCCTGCTATAATGAGGTTCTT CGTATTGACCCATTGGCAGCTGACGCTCTGGTTAATAGAGGGAATACTTACAAAGAGATC GGGAGGGTAACTGAAGCAATTCAGGATTACATGCATGCTATAAACTTCCGGCCTACAATG GCTGAAGCTCACGCAAACCTGGCCTCAGCTTACAAGGATAGTGGGCATGTAGAAGCTGCC ATTACGAGCTATAAGCAGGCCTTGCTTCTACGACCAGACTTCCCAGAAGCAACGTGCAAC CTTCTACACACCTTACAGTGTGTATGCTGTTGGGAGGACCGTAGCAAAATGTTCGCTGAA GTTGAAAGCATTATTAGGAGGCAAATAAATATGTCGGTCCTTCCAAGTGTCCAGCCCTTC CATGCAATAGCATATCCTATTGACCCTATTCTTGCCCTTGAAATCAGTCGTAAATACGCT GCACACTGCTCCATAATCGCTTCTCGTTTTGGACTACCTCCTTTTACCCATCCAGCTGGG CTCCCTGTAAAACGTGAGGGAGGATTTAAGAGATTAAGGATTGGATACGTGAGCAGTGAT TTTGGTAACCATCCGTTGTCACACCTCATGGGATCAGTGTTTGGGATGCACAACAGAGAA AACGTTGAGGTTTTCTGCTATGCTCTGAGTGCAAATGATAATACTGAGTGGAGACAGCGA ATCCAGTCAGAAGCCGAGCATTTCCTGGACGTTTCTGCTATGTCATCTGATGCTATCGCC AAAATTATAAACCAAGACAAAATCCAGATCCTCATCAATCTAAACGGTTATACCAAGGGG GCTAGAAATGAAATATTTGCCATGCAGCCTGCTCCGATCCAGGTTTCATATATGGGCTTC CCGGGTACCACTGGAGCAACCTATATTGACTATCTAGTGACTGATGAGTTCGTGTCTCCT CTGCAATATGCACATATTTACTCAGAGAAGCTGGTCCACCTTCCCCATTGCTACTTTGTC AATGATTACAAGCAGAAAAATCAGGATGTGTTGGATCCAAATTCGAAGCCCAAGCGATCA GACTATGGACTTCCTGAAGACAAATTCATATTTGCATGCTTCAACCAACTGTACAAAATG GATCCTGAGATCGTTAATACTTGGTGCAACATTCTTAAACGAGTACCCAACAGTGCTCTT TGGCTTCTCCGTTTTCCAGCAGCCGGAGAGATGAGGTTTCGCACATATGCTGCTGCCCAA GGTGTACAGCCTGATCAAATTATCTTCACTGATGTTGCCATGAAGAGTGAACATATCAGG CGAAGTGTCCTTGCCGATGTAATCCTCGACACGCCCCTGTGCAATGGACACACAACAGGA ACAGATGTACTGTGGGCTGGTGTACCAATGATAACGTTACCACTTGAGAAAATGGCAACT CGAGTGGCTGGATCACTCTGCCTTGCAACTGGTCTGGGCCATGGGATGATTGTTAACAGC TTGGAGGAGTACGAAGAGAAGGCTGTCTCTTTGGCACTGAACAAGCCAAAACTTCAGGCA CTGACTAAGGAATTGAGGGCTAGCCGCTTAACCTGTCCTCTATTCGACACCATGCGTTGG GTGAAGAATCTGGAGAGGTCATACTTCAAAATGTGGAACCTCCATTGCTCTGGGCAGCAG CCACAACACTTCAAGGTGTTGGAAAACGACCTAGAATTCCCACATGACAGATAA

Peptide Sequence

PEP ID	AT3G04240.1
PEP Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr3:1114187-1120722 REVERSE LENGTH=977 \| 201606
Sequence	MISSKNGAAMISRPVFLSDRVDEVFSRKLDLSVSSSSSSSLLQQFNKTHEGDDDARLALA HQLYKGGDFKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYDMCIARNEEALRIQPQF AECYGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQ ALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLN RALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNSAMAFGNIASI YYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPNHPQ AMANLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYSDAISCYNEVL RIDPLAADALVNRGNTYKEIGRVTEAIQDYMHAINFRPTMAEAHANLASAYKDSGHVEAA ITSYKQALLLRPDFPEATCNLLHTLQCVCCWEDRSKMFAEVESIIRRQINMSVLPSVQPF HAIAYPIDPILALEISRKYAAHCSIIASRFGLPPFTHPAGLPVKREGGFKRLRIGYVSSD FGNHPLSHLMGSVFGMHNRENVEVFCYALSANDNTEWRQRIQSEAEHFLDVSAMSSDAIA KIINQDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFVSP LQYAHIYSEKLVHLPHCYFVNDYKQKNQDVLDPNSKPKRSDYGLPEDKFIFACFNQLYKM DPEIVNTWCNILKRVPNSALWLLRFPAAGEMRFRTYAAAQGVQPDQIIFTDVAMKSEHIR RSVLADVILDTPLCNGHTTGTDVLWAGVPMITLPLEKMATRVAGSLCLATGLGHGMIVNS LEEYEEKAVSLALNKPKLQALTKELRASRLTCPLFDTMRWVKNLERSYFKMWNLHCSGQQ PQHFKVLENDLEFPHDR

Transcript Sequence

Transcript ID	AT3G04240.1
Transcript Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr3:1113914-1120933 REVERSE LENGTH=3418 \| 201606
Sequence	GGTCGGAAAGAGGAAATTGAAAAAAAGGCAAATAAAAGCTAAAGAGGAAAGACGAAGCTA CAGCTTCTGAGGTCGGAAAAAACGAATTTTGATAATTTAGGGTTTTGCCCTTTTCTTCTC TCTTGCGTTATCATCGGTGTTTTGATTCTCCGGCCAAGTCCCGGAGACTTGTGATCTGGG GGAATTTGGTGTTCAATTTCATTAAGACGCGATGATCTCGTCCAAAAACGGAGCTGCCAT GATCTCCCGACCTGTCTTTCTTTCCGATCGAGTTGATGAAGTCTTCTCTAGAAAGCTTGA TTTGTCTGTCTCTTCTTCGTCTTCTTCGAGCCTCCTCCAGCAGTTCAATAAGACTCATGA AGGTGATGATGACGCACGCCTGGCTCTTGCTCATCAGCTATACAAAGGAGGCGATTTCAA ACAAGCCCTGGAGCACAGCAACATGGTTTACCAGAGAAACCCATTACGCACTGATAATCT TCTTCTAATTGGTGCTATTTATTACCAGCTTCAAGAGTATGATATGTGCATAGCTCGAAA TGAAGAAGCTCTTCGTATTCAACCTCAGTTTGCTGAGTGTTATGGAAACATGGCAAACGC GTGGAAGGAAAAAGGGGACACTGATCGTGCAATCCGCTACTATTTAATTGCAATTGAGCT GAGGCCCAATTTTGCTGATGCTTGGTCGAACTTGGCAAGTGCATACATGCGAAAGGGAAG ACTCAGTGAGGCAACACAATGCTGTCAGCAGGCCCTCTCATTGAATCCACTTCTGGTTGA CGCACATAGTAATCTGGGGAATCTGATGAAGGCTCAAGGATTGATTCATGAAGCATACAG TTGTTACCTTGAAGCTGTTCGTATACAACCAACATTTGCTATTGCATGGTCGAATCTTGC TGGTCTTTTCATGGAGTCAGGTGATCTCAACAGAGCCCTTCAATACTACAAGGAAGCTGT GAAGTTGAAACCTGCATTCCCTGATGCATATTTAAATTTAGGAAACGTGTATAAGGCCCT CGGGAGACCTACTGAAGCGATCATGTGTTATCAGCATGCCTTACAGATGCGGCCAAATTC TGCAATGGCATTTGGGAATATAGCCAGTATATACTATGAGCAAGGTCAACTAGATTTAGC AATTCGACACTACAAGCAGGCTCTCTCCCGGGATCCACGATTTTTGGAGGCTTACAATAA CTTGGGTAATGCATTGAAGGATATTGGGCGAGTTGATGAAGCAGTTCGGTGTTATAATCA ATGTCTTGCTTTACAACCAAATCATCCACAAGCCATGGCTAATCTTGGAAACATTTATAT GGAGTGGAATATGATGGGTCCTGCTTCCTCATTATTCAAGGCTACTCTGGCTGTAACTAC AGGGCTATCTGCTCCGTTCAATAACCTTGCTATAATTTACAAGCAACAGGGAAATTACTC GGATGCTATATCCTGCTATAATGAGGTTCTTCGTATTGACCCATTGGCAGCTGACGCTCT GGTTAATAGAGGGAATACTTACAAAGAGATCGGGAGGGTAACTGAAGCAATTCAGGATTA CATGCATGCTATAAACTTCCGGCCTACAATGGCTGAAGCTCACGCAAACCTGGCCTCAGC TTACAAGGATAGTGGGCATGTAGAAGCTGCCATTACGAGCTATAAGCAGGCCTTGCTTCT ACGACCAGACTTCCCAGAAGCAACGTGCAACCTTCTACACACCTTACAGTGTGTATGCTG TTGGGAGGACCGTAGCAAAATGTTCGCTGAAGTTGAAAGCATTATTAGGAGGCAAATAAA TATGTCGGTCCTTCCAAGTGTCCAGCCCTTCCATGCAATAGCATATCCTATTGACCCTAT TCTTGCCCTTGAAATCAGTCGTAAATACGCTGCACACTGCTCCATAATCGCTTCTCGTTT TGGACTACCTCCTTTTACCCATCCAGCTGGGCTCCCTGTAAAACGTGAGGGAGGATTTAA GAGATTAAGGATTGGATACGTGAGCAGTGATTTTGGTAACCATCCGTTGTCACACCTCAT GGGATCAGTGTTTGGGATGCACAACAGAGAAAACGTTGAGGTTTTCTGCTATGCTCTGAG TGCAAATGATAATACTGAGTGGAGACAGCGAATCCAGTCAGAAGCCGAGCATTTCCTGGA CGTTTCTGCTATGTCATCTGATGCTATCGCCAAAATTATAAACCAAGACAAAATCCAGAT CCTCATCAATCTAAACGGTTATACCAAGGGGGCTAGAAATGAAATATTTGCCATGCAGCC TGCTCCGATCCAGGTTTCATATATGGGCTTCCCGGGTACCACTGGAGCAACCTATATTGA CTATCTAGTGACTGATGAGTTCGTGTCTCCTCTGCAATATGCACATATTTACTCAGAGAA GCTGGTCCACCTTCCCCATTGCTACTTTGTCAATGATTACAAGCAGAAAAATCAGGATGT GTTGGATCCAAATTCGAAGCCCAAGCGATCAGACTATGGACTTCCTGAAGACAAATTCAT ATTTGCATGCTTCAACCAACTGTACAAAATGGATCCTGAGATCGTTAATACTTGGTGCAA CATTCTTAAACGAGTACCCAACAGTGCTCTTTGGCTTCTCCGTTTTCCAGCAGCCGGAGA GATGAGGTTTCGCACATATGCTGCTGCCCAAGGTGTACAGCCTGATCAAATTATCTTCAC TGATGTTGCCATGAAGAGTGAACATATCAGGCGAAGTGTCCTTGCCGATGTAATCCTCGA CACGCCCCTGTGCAATGGACACACAACAGGAACAGATGTACTGTGGGCTGGTGTACCAAT GATAACGTTACCACTTGAGAAAATGGCAACTCGAGTGGCTGGATCACTCTGCCTTGCAAC TGGTCTGGGCCATGGGATGATTGTTAACAGCTTGGAGGAGTACGAAGAGAAGGCTGTCTC TTTGGCACTGAACAAGCCAAAACTTCAGGCACTGACTAAGGAATTGAGGGCTAGCCGCTT AACCTGTCCTCTATTCGACACCATGCGTTGGGTGAAGAATCTGGAGAGGTCATACTTCAA AATGTGGAACCTCCATTGCTCTGGGCAGCAGCCACAACACTTCAAGGTGTTGGAAAACGA CCTAGAATTCCCACATGACAGATAAACAAGGAGGGAAAGACAACTGAAACACATGAGGAC CCGGCATTGTAAATAAAAAACCGAAGAGAATTAGTAGCAGAAATATTGATAAATTATCAG AGCTAGAGAAGATTATTATTGTTTGAGCTGTGTACTATATATATAAAACAAAGCTGGCTG TGTTATCTCTGTTTTCCATTACCGGAGCATGTGCAATATCCCAATGTAACATTACATGAA AACATATATATATATATATATATTGATCATTTGAACCAAAACGGATCGTTTAGCTCCC