Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G03960.1
CDS Infomation	\| TCP-1/cpn60 chaperonin family protein \| Chr3:1024432-1027604 FORWARD LENGTH=1650 \| 201606
Sequence	ATGGTGGGTATGTCGATGCAGCCATATGGTATTCAATCGATGCTTAAAGAAGGTTACAGG CATCTCTCTGGTCTCGACGAAGCCGTCATTAAGAACATTGAAGCTTGCAAGGAGCTCTCC ACCATTACTCGCACCTCTCTCGGTCCCAATGGAATGAATAAAATGGTTATCAATCATTTG GACAAACTGTTTGTCACAAATGACGCTGCTACTATAGTGAATGAGCTCGAGATTCAGCAC CCGGCTGCTAAACTTCTGGTTTTAGCTGCTAAGGCTCAGCAAGAAGAAATCGGAGATGGA GCTAATCTGACAATCTCCTTTGCTGGTGAACTTCTTCAAAACGCTGAGGAGCTTATCAGG ATGGGACTTCATCCGAGTGAGATCATTAGTGGATATACTAAAGCTGTCAGCAAGGCTGTT GAAATACTGGAACAACTGGTTGAGACTGGTTCTGAGACCATGGATGTACGTAACAAGGAT GAAGTTATTTCTCGGATGAGAGCAGCTGTTGCAAGCAAGCAGTTTGGGCAAGAGGAAATA ATTTGCTCTTTAGTTACTGACGCATGTATTCAAGTCTGCCCAAAGAATCCAACGAATTTC AATGTGGATAATGTTCGTGTTTCCAAGCTTTTGGGAGGAGGCTTGCACAATTCTTGCATA GTCCGTGGTATGGTCTTGAAAAGTGATGCTGTTGGTAGCATTAAGCGAATGGAGAAAGCG AAGGTTGCTGTATTTGCTGGTGGCGTTGATACCACTGCAACAGAGACCAAAGGAACTGTC CTCATTCATAGTGCTGAGCAGCTAGAGAACTATGCAAAGACAGAGGAAGCTAAAGTTGAG GAGTTGATTAAAGCAGTTGCGGAATCAGGAGCCAAAGTCATTGTTAGTGGAGGATCAATT GGAGAAATGGCATTGCATTTCTGTGAGCGCTACAAGATAATGGTATTGAAAATCAGCTCA AAGTTTGAACTGAGGCGTTTTTGCCGTACAGCGGGGGCTGTCGCCCATTTGAAGCTTAGC CGGCCAAGCCCTGAAGATCTTGGATATGTTGATTCTATATCGGTTGAGGAAATTGGTGGT GTGACAGTCACGATTGCAAGAAACGAGGAAGGTGGTAACTCCATCTCCACTGTGGTCTTG CGTGGAAGCACAGATAGCATTTTGGACGACCTTGAGAGAGCTGTTGATGATGGAGTTAAC ACATACAAGGCCATGTGCAGAGACAGCCGTATTGTTCCCGGGGCTGCAGCGACTGAAATA GAGTTGGCTCAAAGGTTGAAGGAATACGCCAATGCAGAAATAGGGTTGGACAAATATGCC ATCACCAAATACGCTGAGAGTTTTGAGTTTGTACCCAAGACCCTTGCAGATAATGCTGGC CTCAATGCGATGGAAATCATAGCCGCTCTGTACACTGGACATGGATCTGGAAACACAAAA CTAGGCATTGACTTAGAGGAAGGTGCTTGTAAAGATGTTTCAGAGACAAAAGTATGGGAT CTTTTTGCAACCAAGTTATTTGCCCTTAAATATGCTTCAGATGCTGCATGCACTGTACTT CGTGTAGACCAGATTATAATGGCGAAACCAGCAGGTGGACCAAGGAGAGATGCAGCTCAA GCTGCAGGTGCTGGTGCGGAGGAAGACTAA

Peptide Sequence

PEP ID	AT3G03960.1
PEP Infomation	\| TCP-1/cpn60 chaperonin family protein \| Chr3:1024432-1027604 FORWARD LENGTH=549 \| 201606
Sequence	MVGMSMQPYGIQSMLKEGYRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHL DKLFVTNDAATIVNELEIQHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIR MGLHPSEIISGYTKAVSKAVEILEQLVETGSETMDVRNKDEVISRMRAAVASKQFGQEEI ICSLVTDACIQVCPKNPTNFNVDNVRVSKLLGGGLHNSCIVRGMVLKSDAVGSIKRMEKA KVAVFAGGVDTTATETKGTVLIHSAEQLENYAKTEEAKVEELIKAVAESGAKVIVSGGSI GEMALHFCERYKIMVLKISSKFELRRFCRTAGAVAHLKLSRPSPEDLGYVDSISVEEIGG VTVTIARNEEGGNSISTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEI ELAQRLKEYANAEIGLDKYAITKYAESFEFVPKTLADNAGLNAMEIIAALYTGHGSGNTK LGIDLEEGACKDVSETKVWDLFATKLFALKYASDAACTVLRVDQIIMAKPAGGPRRDAAQ AAGAGAEED

Transcript Sequence

Transcript ID	AT3G03960.1
Transcript Infomation	\| TCP-1/cpn60 chaperonin family protein \| Chr3:1024144-1027891 FORWARD LENGTH=2225 \| 201606
Sequence	CTCTATTCGTCCCTAAACTTTCATATAATACAACTTTCACCCCTAAAGATTTAAGATCTC AATTTTTGGCCCCCATCCCCTTAAAATTTAAAACGACACCGTTGTGAACTCCCATTTTAA AACCTCGAAAGTTTTCTAGGGCAATCTCGGCCACTTTTACTCACAGAAAACCTTCTCTCT AAACTTCTTCGAAAATCTCACAGAGCTTCTTCTTCTTCGCTTTTAGGGTTTTTGCTCTAT TGTTTCGAGTGACCCAACTTCGAAGCTTATAGATCGTTACCTTAGAAAATGGTGGGTATG TCGATGCAGCCATATGGTATTCAATCGATGCTTAAAGAAGGTTACAGGCATCTCTCTGGT CTCGACGAAGCCGTCATTAAGAACATTGAAGCTTGCAAGGAGCTCTCCACCATTACTCGC ACCTCTCTCGGTCCCAATGGAATGAATAAAATGGTTATCAATCATTTGGACAAACTGTTT GTCACAAATGACGCTGCTACTATAGTGAATGAGCTCGAGATTCAGCACCCGGCTGCTAAA CTTCTGGTTTTAGCTGCTAAGGCTCAGCAAGAAGAAATCGGAGATGGAGCTAATCTGACA ATCTCCTTTGCTGGTGAACTTCTTCAAAACGCTGAGGAGCTTATCAGGATGGGACTTCAT CCGAGTGAGATCATTAGTGGATATACTAAAGCTGTCAGCAAGGCTGTTGAAATACTGGAA CAACTGGTTGAGACTGGTTCTGAGACCATGGATGTACGTAACAAGGATGAAGTTATTTCT CGGATGAGAGCAGCTGTTGCAAGCAAGCAGTTTGGGCAAGAGGAAATAATTTGCTCTTTA GTTACTGACGCATGTATTCAAGTCTGCCCAAAGAATCCAACGAATTTCAATGTGGATAAT GTTCGTGTTTCCAAGCTTTTGGGAGGAGGCTTGCACAATTCTTGCATAGTCCGTGGTATG GTCTTGAAAAGTGATGCTGTTGGTAGCATTAAGCGAATGGAGAAAGCGAAGGTTGCTGTA TTTGCTGGTGGCGTTGATACCACTGCAACAGAGACCAAAGGAACTGTCCTCATTCATAGT GCTGAGCAGCTAGAGAACTATGCAAAGACAGAGGAAGCTAAAGTTGAGGAGTTGATTAAA GCAGTTGCGGAATCAGGAGCCAAAGTCATTGTTAGTGGAGGATCAATTGGAGAAATGGCA TTGCATTTCTGTGAGCGCTACAAGATAATGGTATTGAAAATCAGCTCAAAGTTTGAACTG AGGCGTTTTTGCCGTACAGCGGGGGCTGTCGCCCATTTGAAGCTTAGCCGGCCAAGCCCT GAAGATCTTGGATATGTTGATTCTATATCGGTTGAGGAAATTGGTGGTGTGACAGTCACG ATTGCAAGAAACGAGGAAGGTGGTAACTCCATCTCCACTGTGGTCTTGCGTGGAAGCACA GATAGCATTTTGGACGACCTTGAGAGAGCTGTTGATGATGGAGTTAACACATACAAGGCC ATGTGCAGAGACAGCCGTATTGTTCCCGGGGCTGCAGCGACTGAAATAGAGTTGGCTCAA AGGTTGAAGGAATACGCCAATGCAGAAATAGGGTTGGACAAATATGCCATCACCAAATAC GCTGAGAGTTTTGAGTTTGTACCCAAGACCCTTGCAGATAATGCTGGCCTCAATGCGATG GAAATCATAGCCGCTCTGTACACTGGACATGGATCTGGAAACACAAAACTAGGCATTGAC TTAGAGGAAGGTGCTTGTAAAGATGTTTCAGAGACAAAAGTATGGGATCTTTTTGCAACC AAGTTATTTGCCCTTAAATATGCTTCAGATGCTGCATGCACTGTACTTCGTGTAGACCAG ATTATAATGGCGAAACCAGCAGGTGGACCAAGGAGAGATGCAGCTCAAGCTGCAGGTGCT GGTGCGGAGGAAGACTAAGCCGGAGAACAAATACCTCGTAGTGAAACTCTCTTCTTTTGT AACCTTCTGTTCCTGAAAGTCTGAGAAAATTTTGGTATGTCTCAGTTTAAGATTTGTGAT CTTTGTAACGCACCACCAACTTAAGTGTTTTGCCTTCTTTTTCTGTTTTGCCTTGTTTTG GCTCGTCTCAACACTCAGATTTTCCGGTTTAGCTAGTGAAATTATTACTAGGATTTTTGG CTTAACTCTGTATTAATGTCAATTTGGTTTCTATTTGAATCGACTTTTGAACAAGTGACA AAATC