Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G02330.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:473881-476592 REVERSE LENGTH=2712 \| 201606
Sequence	ATGGCGGAGAGTCTCAGATTATTGCATATGACCAGATCAGTGGTTTCATTCAATCGTTGT CTAACAGAGAAAATTTCATACCGGAGAGTTCCAAGCTTTTCTTATTTCACTGATTTTCTG AATCAAGTGAACTCAGTTAGCACGACGAACTTTTCGTTTGTTTTCAAGGAATGTGCGAAG CAAGGAGCGTTAGAGCTAGGCAAGCAAGCTCATGCTCATATGATAATATCTGGGTTTCGT CCGACTACATTCGTACTGAACTGTTTGCTGCAGGTCTACACAAATTCAAGAGATTTCGTG TCTGCTTCTATGGTGTTCGACAAAATGCCGCTGAGAGATGTTGTTTCTTGGAACAAAATG ATAAATGGTTACTCGAAGAGTAATGACATGTTTAAAGCGAATTCTTTCTTCAATATGATG CCTGTGAGAGATGTTGTGTCTTGGAACTCAATGCTTTCTGGGTATCTGCAAAACGGCGAG AGTTTGAAATCTATCGAGGTTTTCGTTGACATGGGGAGAGAAGGTATTGAGTTTGACGGT AGAACTTTTGCAATTATTCTTAAAGTTTGTTCCTTTTTAGAGGATACCAGTTTAGGAATG CAGATTCATGGGATTGTCGTTCGAGTGGGTTGTGATACTGATGTGGTTGCTGCGAGTGCG TTGTTGGATATGTATGCAAAAGGCAAGAGGTTTGTCGAGTCTCTTAGAGTGTTTCAAGGT ATACCAGAGAAGAATTCTGTCTCGTGGAGTGCTATAATCGCAGGTTGTGTTCAGAATAAC TTGTTGTCCCTTGCTTTGAAGTTTTTCAAGGAGATGCAAAAGGTAAATGCTGGAGTGAGC CAGTCAATTTACGCTAGCGTCTTGAGGTCATGTGCTGCGTTATCCGAATTGAGGTTAGGC GGTCAGTTACATGCTCATGCCTTGAAGTCAGATTTTGCAGCAGATGGTATAGTGAGGACG GCGACATTGGACATGTACGCAAAGTGTGATAATATGCAAGATGCTCAAATTTTGTTTGAC AACTCAGAAAATCTTAATAGGCAATCTTATAACGCAATGATTACTGGTTATTCGCAAGAA GAACATGGTTTCAAAGCTCTACTGTTGTTTCACCGACTCATGTCATCGGGTCTTGGTTTC GACGAGATAAGTTTATCAGGAGTATTCAGGGCTTGTGCCTTGGTGAAAGGACTTTCAGAG GGGCTTCAGATTTACGGTTTGGCGATAAAAAGCAGCTTATCGCTAGATGTTTGCGTTGCA AATGCTGCTATCGACATGTATGGGAAATGTCAAGCTCTGGCTGAAGCCTTTCGTGTATTC GATGAGATGAGAAGACGAGACGCTGTGTCTTGGAATGCGATTATAGCTGCACATGAGCAG AACGGAAAAGGATATGAAACGCTTTTTCTTTTTGTCTCGATGCTCCGTTCTAGGATCGAA CCTGATGAGTTTACCTTTGGAAGCATATTGAAAGCTTGCACTGGTGGTTCTTTAGGTTAC GGTATGGAGATCCATTCCAGCATTGTCAAATCAGGAATGGCTTCAAACTCCTCTGTCGGA TGCTCTCTGATCGATATGTATTCAAAGTGTGGAATGATAGAAGAGGCGGAGAAGATACAT AGTCGATTCTTTCAACGAGCCAATGTCTCGGGAACAATGGAAGAGCTTGAAAAGATGCAC AATAAGAGACTGCAGGAAATGTGTGTTTCATGGAATTCAATTATTTCCGGATATGTAATG AAGGAACAAAGCGAGGATGCTCAGATGCTTTTTACCCGGATGATGGAGATGGGTATAACT CCTGACAAATTTACTTATGCAACAGTTCTTGATACCTGTGCGAATCTTGCTTCCGCTGGA TTAGGTAAACAGATTCATGCTCAGGTCATCAAGAAAGAATTGCAATCTGATGTGTATATC TGTAGCACCCTCGTTGACATGTACTCGAAATGTGGAGATCTCCATGATTCAAGATTGATG TTTGAGAAGTCGCTGAGAAGAGATTTCGTGACCTGGAACGCCATGATTTGCGGGTATGCA CATCATGGGAAAGGAGAGGAAGCTATACAACTGTTTGAGAGAATGATACTCGAAAACATC AAACCAAATCACGTTACTTTCATATCGATACTCCGAGCTTGTGCTCACATGGGTCTGATC GACAAAGGGCTCGAGTACTTCTATATGATGAAGAGAGACTATGGCCTGGATCCTCAGCTA CCGCATTACTCGAACATGGTAGATATATTAGGAAAATCCGGAAAAGTCAAGAGAGCATTA GAGCTTATTCGAGAGATGCCATTTGAAGCAGACGATGTCATATGGAGAACCCTGTTAGGA GTCTGCACGATACATAGAAACAATGTAGAGGTTGCAGAAGAAGCAACTGCTGCCCTGTTG AGATTGGATCCACAAGACTCTTCAGCTTATACACTTTTATCAAATGTATACGCAGATGCA GGAATGTGGGAAAAGGTTTCAGATTTGAGGAGAAATATGAGAGGCTTTAAGCTTAAGAAG GAGCCTGGTTGCAGTTGGGTTGAGCTAAAAGATGAGCTTCATGTGTTTCTCGTTGGAGAT AAGGCTCATCCTAGATGGGAAGAGATTTACGAAGAGCTTGGTTTGATTTACAGTGAAATG AAACCTTTTGATGATTCTTCTTTCGTGCGTGGGGTTGAAGTAGAAGAAGAGGACCAATGG TGTTACTGCTAA

Peptide Sequence

PEP ID	AT3G02330.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:473881-476592 REVERSE LENGTH=903 \| 201606
Sequence	MAESLRLLHMTRSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAK QGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKM INGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDG RTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQE EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVA NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE PDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK EPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVRGVEVEEEDQW CYC

Transcript Sequence

Transcript ID	AT3G02330.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr3:473774-476662 REVERSE LENGTH=2889 \| 201606
Sequence	CCGAACCGAAGCAATTGTAATCGTTTCAATCCCGCCATAGATACCACTGAGTTTCAGTTC GTTATGACTCATGGCGGAGAGTCTCAGATTATTGCATATGACCAGATCAGTGGTTTCATT CAATCGTTGTCTAACAGAGAAAATTTCATACCGGAGAGTTCCAAGCTTTTCTTATTTCAC TGATTTTCTGAATCAAGTGAACTCAGTTAGCACGACGAACTTTTCGTTTGTTTTCAAGGA ATGTGCGAAGCAAGGAGCGTTAGAGCTAGGCAAGCAAGCTCATGCTCATATGATAATATC TGGGTTTCGTCCGACTACATTCGTACTGAACTGTTTGCTGCAGGTCTACACAAATTCAAG AGATTTCGTGTCTGCTTCTATGGTGTTCGACAAAATGCCGCTGAGAGATGTTGTTTCTTG GAACAAAATGATAAATGGTTACTCGAAGAGTAATGACATGTTTAAAGCGAATTCTTTCTT CAATATGATGCCTGTGAGAGATGTTGTGTCTTGGAACTCAATGCTTTCTGGGTATCTGCA AAACGGCGAGAGTTTGAAATCTATCGAGGTTTTCGTTGACATGGGGAGAGAAGGTATTGA GTTTGACGGTAGAACTTTTGCAATTATTCTTAAAGTTTGTTCCTTTTTAGAGGATACCAG TTTAGGAATGCAGATTCATGGGATTGTCGTTCGAGTGGGTTGTGATACTGATGTGGTTGC TGCGAGTGCGTTGTTGGATATGTATGCAAAAGGCAAGAGGTTTGTCGAGTCTCTTAGAGT GTTTCAAGGTATACCAGAGAAGAATTCTGTCTCGTGGAGTGCTATAATCGCAGGTTGTGT TCAGAATAACTTGTTGTCCCTTGCTTTGAAGTTTTTCAAGGAGATGCAAAAGGTAAATGC TGGAGTGAGCCAGTCAATTTACGCTAGCGTCTTGAGGTCATGTGCTGCGTTATCCGAATT GAGGTTAGGCGGTCAGTTACATGCTCATGCCTTGAAGTCAGATTTTGCAGCAGATGGTAT AGTGAGGACGGCGACATTGGACATGTACGCAAAGTGTGATAATATGCAAGATGCTCAAAT TTTGTTTGACAACTCAGAAAATCTTAATAGGCAATCTTATAACGCAATGATTACTGGTTA TTCGCAAGAAGAACATGGTTTCAAAGCTCTACTGTTGTTTCACCGACTCATGTCATCGGG TCTTGGTTTCGACGAGATAAGTTTATCAGGAGTATTCAGGGCTTGTGCCTTGGTGAAAGG ACTTTCAGAGGGGCTTCAGATTTACGGTTTGGCGATAAAAAGCAGCTTATCGCTAGATGT TTGCGTTGCAAATGCTGCTATCGACATGTATGGGAAATGTCAAGCTCTGGCTGAAGCCTT TCGTGTATTCGATGAGATGAGAAGACGAGACGCTGTGTCTTGGAATGCGATTATAGCTGC ACATGAGCAGAACGGAAAAGGATATGAAACGCTTTTTCTTTTTGTCTCGATGCTCCGTTC TAGGATCGAACCTGATGAGTTTACCTTTGGAAGCATATTGAAAGCTTGCACTGGTGGTTC TTTAGGTTACGGTATGGAGATCCATTCCAGCATTGTCAAATCAGGAATGGCTTCAAACTC CTCTGTCGGATGCTCTCTGATCGATATGTATTCAAAGTGTGGAATGATAGAAGAGGCGGA GAAGATACATAGTCGATTCTTTCAACGAGCCAATGTCTCGGGAACAATGGAAGAGCTTGA AAAGATGCACAATAAGAGACTGCAGGAAATGTGTGTTTCATGGAATTCAATTATTTCCGG ATATGTAATGAAGGAACAAAGCGAGGATGCTCAGATGCTTTTTACCCGGATGATGGAGAT GGGTATAACTCCTGACAAATTTACTTATGCAACAGTTCTTGATACCTGTGCGAATCTTGC TTCCGCTGGATTAGGTAAACAGATTCATGCTCAGGTCATCAAGAAAGAATTGCAATCTGA TGTGTATATCTGTAGCACCCTCGTTGACATGTACTCGAAATGTGGAGATCTCCATGATTC AAGATTGATGTTTGAGAAGTCGCTGAGAAGAGATTTCGTGACCTGGAACGCCATGATTTG CGGGTATGCACATCATGGGAAAGGAGAGGAAGCTATACAACTGTTTGAGAGAATGATACT CGAAAACATCAAACCAAATCACGTTACTTTCATATCGATACTCCGAGCTTGTGCTCACAT GGGTCTGATCGACAAAGGGCTCGAGTACTTCTATATGATGAAGAGAGACTATGGCCTGGA TCCTCAGCTACCGCATTACTCGAACATGGTAGATATATTAGGAAAATCCGGAAAAGTCAA GAGAGCATTAGAGCTTATTCGAGAGATGCCATTTGAAGCAGACGATGTCATATGGAGAAC CCTGTTAGGAGTCTGCACGATACATAGAAACAATGTAGAGGTTGCAGAAGAAGCAACTGC TGCCCTGTTGAGATTGGATCCACAAGACTCTTCAGCTTATACACTTTTATCAAATGTATA CGCAGATGCAGGAATGTGGGAAAAGGTTTCAGATTTGAGGAGAAATATGAGAGGCTTTAA GCTTAAGAAGGAGCCTGGTTGCAGTTGGGTTGAGCTAAAAGATGAGCTTCATGTGTTTCT CGTTGGAGATAAGGCTCATCCTAGATGGGAAGAGATTTACGAAGAGCTTGGTTTGATTTA CAGTGAAATGAAACCTTTTGATGATTCTTCTTTCGTGCGTGGGGTTGAAGTAGAAGAAGA GGACCAATGGTGTTACTGCTAAACAATTTTGTATTAAAAGTAAATTTAACAAATAGATTG TTTACAGCGTTTGTATAGTTGTAGTTTTGTTTGTTCAAGTACTATGATATTGCTTCATTT AATGATGAT