Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G01880.1
CDS Infomation	\| vacuolar sorting-associated protein (DUF946) \| Chr3:307782-309560 FORWARD LENGTH=1779 \| 201606
Sequence	ATGCAACTCTTGTATGAAACCTACTTAAAATTTCTATTGTTTTTTGTTTTTCTATTTGTT AAGCAATTGTCATGGGCAGAAACTGGAACTAACCCTTTGACCAACATTTCCTACGTAAAT TCTTTAGGGTATCCATTCAAATATCCTTATCTTTCGTCTAATGGTTTACCGGTGGAAACA AGCTTTAAATTTCCTAGTCCTTTGCCTAGTATGCCTTCCGATGGTGGAAATTTTGGCAAA AGAAGCATTGATATGGGAGGTCTTGAGGTTACTCAAATCTCTATCTCAAACTCAACATCA CACAGAGTGTGGAGAACTTATGAAGGAGGGCCGGATAACATGGGAGTCAGCATCTTTGAA CCAACTACTATTCCTCGTAATTTCTTCAAACTTGGCTTCTATGCACAACCTAACAACCGA CAGCTTTTTGGTTGGATTCTTGTTGCAAAAGACGTATCGGGAAGTAATTTAAGACCACCA GTCGACTACACTGAAGTTGGAAACACTACAACATTGCTTATCAAACAAGAGGGGCCTGCA TATTTTTGGCAGCCCCTATGTCCTAATGGATATCATGCGGTTGGTCTATATGTCACTACT TCTCCTATGAAGCCCTCTTTGGGACAAAATTCTATAAGCTGTGTTCGATCTGATCTCACA GAACAGAGTGAAGCCGATACATGGGTATGGAGGATAAAAGATATGACTATTTCTAGTTTG AGACCGGCCACGAGAGGAGTAGAGGCGACAGGTGTGTTCACAGGGACATTCAGCTGCAAA CAACTAAACTTTCTTCCTCATCCCCCTCCTTTATTCTGCTTAAAAAATACAAAATTTGAC TTGTCAAGCATGCCAAGCGAAAATCAAACTAGAGTTTTGTTTAAAACGTATTCTCCTTGG ATATATTTACACCCAAAAGAAGATTTCCTTCCTTCCTCTGTCAATTGGGTTTTCGCTAAC GGTGCCTTGCTACACAAGAAAGGAAACGAATCCATCCCGGTCCCGATACATCCAAATGGT TCAAACCTTCCACAAGGAGGTTGCAATGATGACTTGTTTTGGTTAGATTATCTAGTCGAT AAAAAGGCTAGAGAAAAGGTTAAGAGGGGAGATTTAGAGAGCACTAAGGTGTATCTACAC ATCAAACCAATGTTTGGAGCTACTTTCACAGATATTGTAGTATGGCTATTCTTTCCCTAT AACGGAAATGCACATTTAAAATTTTTGTTTATCAAGAGCCTGTCGCTAGGAAATATTGGC GAGCATGTTGGAGACTGGGAACACGTTACATTACGCATCAGCAACTTCAATGGTGAGTTA TGGCGTGTTTACTTTTCTGAACACAGTGGAGGAACTTTAGTGGATGCATGCGATCTAGAG TTCATGCAAGGTGGAAACAAACCAGTAGTATATTCGTCTCTTCATGGGCATGCAATGTTC TCCAAACCTGGAGTCGTGTTGCAAGGTGGCGGCAAAAGTGGAATAAGGAACGACATGGCA AGAAGCGACAAATGCTTTGACGCAGGTATTGGATATGAAGTGATTGCGGGACCTGGCGTG GTTGAGCCACCGTGGCTGAATTATTTTAGGAAATGGGGACCTCGAGTCCATTACAGGATT GACATATTTCTCAACTCTGTCGCAAAGATTTTGCCCATCTTTTTACGGAAAGGTTTGCGA AAACTCATCAACAAAATTCCTTTAGAAATGCGGGGTCAAGATGGTCCAACTGGTCCCAAA GTTAAGGTGACTTGGACCGGTGATGAACAATATTCTTAG

Peptide Sequence

PEP ID	AT3G01880.1
PEP Infomation	\| vacuolar sorting-associated protein (DUF946) \| Chr3:307782-309560 FORWARD LENGTH=592 \| 201606
Sequence	MQLLYETYLKFLLFFVFLFVKQLSWAETGTNPLTNISYVNSLGYPFKYPYLSSNGLPVET SFKFPSPLPSMPSDGGNFGKRSIDMGGLEVTQISISNSTSHRVWRTYEGGPDNMGVSIFE PTTIPRNFFKLGFYAQPNNRQLFGWILVAKDVSGSNLRPPVDYTEVGNTTTLLIKQEGPA YFWQPLCPNGYHAVGLYVTTSPMKPSLGQNSISCVRSDLTEQSEADTWVWRIKDMTISSL RPATRGVEATGVFTGTFSCKQLNFLPHPPPLFCLKNTKFDLSSMPSENQTRVLFKTYSPW IYLHPKEDFLPSSVNWVFANGALLHKKGNESIPVPIHPNGSNLPQGGCNDDLFWLDYLVD KKAREKVKRGDLESTKVYLHIKPMFGATFTDIVVWLFFPYNGNAHLKFLFIKSLSLGNIG EHVGDWEHVTLRISNFNGELWRVYFSEHSGGTLVDACDLEFMQGGNKPVVYSSLHGHAMF SKPGVVLQGGGKSGIRNDMARSDKCFDAGIGYEVIAGPGVVEPPWLNYFRKWGPRVHYRI DIFLNSVAKILPIFLRKGLRKLINKIPLEMRGQDGPTGPKVKVTWTGDEQYS

Transcript Sequence

Transcript ID	AT3G01880.1
Transcript Infomation	\| vacuolar sorting-associated protein (DUF946) \| Chr3:307782-309560 FORWARD LENGTH=1779 \| 201606
Sequence	ATGCAACTCTTGTATGAAACCTACTTAAAATTTCTATTGTTTTTTGTTTTTCTATTTGTT AAGCAATTGTCATGGGCAGAAACTGGAACTAACCCTTTGACCAACATTTCCTACGTAAAT TCTTTAGGGTATCCATTCAAATATCCTTATCTTTCGTCTAATGGTTTACCGGTGGAAACA AGCTTTAAATTTCCTAGTCCTTTGCCTAGTATGCCTTCCGATGGTGGAAATTTTGGCAAA AGAAGCATTGATATGGGAGGTCTTGAGGTTACTCAAATCTCTATCTCAAACTCAACATCA CACAGAGTGTGGAGAACTTATGAAGGAGGGCCGGATAACATGGGAGTCAGCATCTTTGAA CCAACTACTATTCCTCGTAATTTCTTCAAACTTGGCTTCTATGCACAACCTAACAACCGA CAGCTTTTTGGTTGGATTCTTGTTGCAAAAGACGTATCGGGAAGTAATTTAAGACCACCA GTCGACTACACTGAAGTTGGAAACACTACAACATTGCTTATCAAACAAGAGGGGCCTGCA TATTTTTGGCAGCCCCTATGTCCTAATGGATATCATGCGGTTGGTCTATATGTCACTACT TCTCCTATGAAGCCCTCTTTGGGACAAAATTCTATAAGCTGTGTTCGATCTGATCTCACA GAACAGAGTGAAGCCGATACATGGGTATGGAGGATAAAAGATATGACTATTTCTAGTTTG AGACCGGCCACGAGAGGAGTAGAGGCGACAGGTGTGTTCACAGGGACATTCAGCTGCAAA CAACTAAACTTTCTTCCTCATCCCCCTCCTTTATTCTGCTTAAAAAATACAAAATTTGAC TTGTCAAGCATGCCAAGCGAAAATCAAACTAGAGTTTTGTTTAAAACGTATTCTCCTTGG ATATATTTACACCCAAAAGAAGATTTCCTTCCTTCCTCTGTCAATTGGGTTTTCGCTAAC GGTGCCTTGCTACACAAGAAAGGAAACGAATCCATCCCGGTCCCGATACATCCAAATGGT TCAAACCTTCCACAAGGAGGTTGCAATGATGACTTGTTTTGGTTAGATTATCTAGTCGAT AAAAAGGCTAGAGAAAAGGTTAAGAGGGGAGATTTAGAGAGCACTAAGGTGTATCTACAC ATCAAACCAATGTTTGGAGCTACTTTCACAGATATTGTAGTATGGCTATTCTTTCCCTAT AACGGAAATGCACATTTAAAATTTTTGTTTATCAAGAGCCTGTCGCTAGGAAATATTGGC GAGCATGTTGGAGACTGGGAACACGTTACATTACGCATCAGCAACTTCAATGGTGAGTTA TGGCGTGTTTACTTTTCTGAACACAGTGGAGGAACTTTAGTGGATGCATGCGATCTAGAG TTCATGCAAGGTGGAAACAAACCAGTAGTATATTCGTCTCTTCATGGGCATGCAATGTTC TCCAAACCTGGAGTCGTGTTGCAAGGTGGCGGCAAAAGTGGAATAAGGAACGACATGGCA AGAAGCGACAAATGCTTTGACGCAGGTATTGGATATGAAGTGATTGCGGGACCTGGCGTG GTTGAGCCACCGTGGCTGAATTATTTTAGGAAATGGGGACCTCGAGTCCATTACAGGATT GACATATTTCTCAACTCTGTCGCAAAGATTTTGCCCATCTTTTTACGGAAAGGTTTGCGA AAACTCATCAACAAAATTCCTTTAGAAATGCGGGGTCAAGATGGTCCAACTGGTCCCAAA GTTAAGGTGACTTGGACCGGTGATGAACAATATTCTTAG