Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT3G01180.1
CDS Infomation	\| starch synthase 2 \| Chr3:62456-65678 REVERSE LENGTH=2379 \| 201606
Sequence	ATGGCATCAGTTGCCGAGAGCTCTTTTCCTCTTCTCTGTCAAATCAAGACTCAGCGTCGC ATCAATTCCTCTACGCTGAGGCATTCCCGTGTTTCTTACCATGATTTGCCTTCTGGCTCG CTGTCTTTTCGTTCTCGGAGCTTTGTTCTGGGACATCGATGCAAGTGTGTGAGCCGCGTC GAGGCTTCCGGCTCAGACGATGATGAGCCAGAGGATGCGCTTCAGGCTACCATTGACAAG AGCAAGAAGGTTCTTGCTATGCAAAGGAACCTTCTTCACCAGATTGCTGAAAGGAGGAAG CTGGTCTCATCTATTAAAGAGAGCACACCTGACTTGGATGATGCAAAAGCTTCTTCCAAA CAAGAGTCTGCTTCTTCTGTGAATGCTAATACTGATGCTACTAAAAAAGAAATTATGGAT GGAGATGCAAACGGTAGTGTTAGTCCAAGCACTTATGGCAAGTCATCTTTAAGTAAAGAA CCAGAAGCTAAGACTTTCTCTCCCAGTACTGAATCCTTGAAGAACCGCAAACAAAGCTCG GCCTCTGTGATATCTTCTTCCCCTGTAACCTCTCCTCAGAAACCATCCGATGTAGCCACT AATGGGAAGCCTTGGTCTAGCGTAGTAGCGTCTAGTGTAGATCCTCCTTATAAACCTTCA TCTGTTATGACCTCTCCTGAGAAAACTTCTGATCCTGTAACTTCTCCTGGAAAGCCAAGT AAATCTCGCGCTGGTGCATTTTGGTCAGATCCACTACCGTCTTATCTGACTAAAGCTCCT CAAACATCAACTATGAAGACAGAGAAGTACGTGGAAAAAACACCTGACGTAGCTAGTAGT GAAACTAACGAACCTGGCAAGGATGAAGAGAAGCCGCCTCCACTGGCTGGAGCAAATGTC ATGAATGTGATATTGGTAGCAGCAGAGTGTGCTCCATTTTCGAAAACAGGTGGCCTTGGA GATGTAGCTGGTGCTTTACCAAAGTCTTTGGCTAGGCGTGGACACAGGGTTATGGTTGTG GTTCCTCGGTATGCCGAGTATGCTGAAGCCAAAGATTTAGGGGTACGGAAGAGATATAAG GTGGCCGGGCAGGATATGGAAGTAATGTACTTCCATGCATTTATAGATGGTGTGGATTTT GTTTTCATTGATAGCCCTGAATTTCGGCATCTGAGTAATAACATTTATGGTGGAAACCGA CTTGATATCTTGAAGCGGATGGTTTTATTTTGCAAGGCTGCTGTTGAGGTTCCGTGGTAT GTTCCTTGTGGAGGTGTGTGTTATGGTGATGGAAATTTGGCTTTTATAGCAAATGATTGG CACACTGCGTTACTACCGGTGTACCTGAAGGCCTATTACCGGGATCACGGAATAATGAAA TACACACGATCTGTTCTTGTAATTCATAACATTGCTCATCAGGGGCGGGGACCGGTAGAT GATTTCTCCTACGTGGATTTACCGAGCCATTACTTGGATAGCTTCAAGTTATATGACCCA GTAGGAGGTGAGCACTTCAATATTTTTGCAGCTGGTCTAAAAGCTGCGGATAGAGTTCTC ACTGTTAGCCATGGATACTCCTGGGAGGTTAAGACCTTAGAAGGAGGTTGGGGTCTGCAT AACATCATAAATGAAAACGACTGGAAATTTAGAGGAATTGTGAACGGTATCGATACACAA GAATGGAACCCAGAATTTGATACTTACTTGCACTCTGATGATTATACCAACTATTCCTTG GAGAATCTTCACATTGGTAAACCCCAATGTAAAGCTGCATTACAGAAAGAGCTCGGTTTG CCTGTTCGGCCTGATGTTCCGCTGATCGGTTTTATTGGAAGATTGGATCACCAGAAAGGT GTTGATTTGATAGCTGAGGCGGTTCCATGGATGATGAGTCAGGATGTTCAGCTGGTTATG TTAGGCACAGGGCGACCGGATCTTGAAGAGGTCCTCAGACAAATGGAGCATCAATATCGA GATAAAGCACGGGGATGGGTTGGATTCTCGGTTAAAACAGCACACAGAATAACAGCTGGT GCAGACATATTGCTGATGCCTTCTAGATTTGAGCCGTGTGGTCTAAACCAGCTTTACGCA ATGAACTATGGAACCATTCCGGTGGTCCATGCCGTGGGAGGATTGAGGGATACAGTTCAA CAATTTGATCCCTATAGTGAAACGGGTCTTGGTTGGACATTTGATAGCGCGGAAGCAGGT AAGTTGATTCATGCCTTAGGAAACTGTTTGTTGACATATAGAGAGTATAAGGAGAGTTGG GAAGGGCTTCAGAGAAGAGGAATGACACAGGATTTGAGTTGGGATAATGCTGCAGAGAAG TACGAAGAAGTTCTTGTTGCTGCTAAGTATCATTGGTGA

Peptide Sequence

PEP ID	AT3G01180.1
PEP Infomation	\| starch synthase 2 \| Chr3:62456-65678 REVERSE LENGTH=792 \| 201606
Sequence	MASVAESSFPLLCQIKTQRRINSSTLRHSRVSYHDLPSGSLSFRSRSFVLGHRCKCVSRV EASGSDDDEPEDALQATIDKSKKVLAMQRNLLHQIAERRKLVSSIKESTPDLDDAKASSK QESASSVNANTDATKKEIMDGDANGSVSPSTYGKSSLSKEPEAKTFSPSTESLKNRKQSS ASVISSSPVTSPQKPSDVATNGKPWSSVVASSVDPPYKPSSVMTSPEKTSDPVTSPGKPS KSRAGAFWSDPLPSYLTKAPQTSTMKTEKYVEKTPDVASSETNEPGKDEEKPPPLAGANV MNVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKRYK VAGQDMEVMYFHAFIDGVDFVFIDSPEFRHLSNNIYGGNRLDILKRMVLFCKAAVEVPWY VPCGGVCYGDGNLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIHNIAHQGRGPVD DFSYVDLPSHYLDSFKLYDPVGGEHFNIFAAGLKAADRVLTVSHGYSWEVKTLEGGWGLH NIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLENLHIGKPQCKAALQKELGL PVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLGTGRPDLEEVLRQMEHQYR DKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAMNYGTIPVVHAVGGLRDTVQ QFDPYSETGLGWTFDSAEAGKLIHALGNCLLTYREYKESWEGLQRRGMTQDLSWDNAAEK YEEVLVAAKYHW

Transcript Sequence

Transcript ID	AT3G01180.1
Transcript Infomation	\| starch synthase 2 \| Chr3:62245-66111 REVERSE LENGTH=3023 \| 201606
Sequence	ATTATTCAATAAAGTTTTATTCCGGAGTTATGCTAAAGAAAAGAGTGTCGATATCTGTAT TTTGTGGACGATTTAGATTACGAAGAAAATCTCGAGGAATAAAAATTTATGTGGCGAGAG ATCAATTGCATCATAATATTATGCTCATGAATCACGCGAGAGTTTATGGTGATTTCGCTC ATTGTGTCCCCATTCTCTCTTCTTTTGTTTGATTCCTCCTCCCTCTTGGTTAACAACAAC TTCACTCACAAAGCATTCCCTTTTTTATTTTTATCGCTACTCTCCGACAAAGCCTTCTTC TTTGGATCATCTAGTCTAGGTTCGGTTTTCTCAATTAGCTCTGTTCGATTTCGCGGATGA AACTTGTTCAAGTTTGTGTCTGATCTGCTCTGCTCTGCTCATACTTAAAAAAGGAAACTT TATTTTTCTGTAAATGGCATCAGTTGCCGAGAGCTCTTTTCCTCTTCTCTGTCAAATCAA GACTCAGCGTCGCATCAATTCCTCTACGCTGAGGCATTCCCGTGTTTCTTACCATGATTT GCCTTCTGGCTCGCTGTCTTTTCGTTCTCGGAGCTTTGTTCTGGGACATCGATGCAAGTG TGTGAGCCGCGTCGAGGCTTCCGGCTCAGACGATGATGAGCCAGAGGATGCGCTTCAGGC TACCATTGACAAGAGCAAGAAGGTTCTTGCTATGCAAAGGAACCTTCTTCACCAGATTGC TGAAAGGAGGAAGCTGGTCTCATCTATTAAAGAGAGCACACCTGACTTGGATGATGCAAA AGCTTCTTCCAAACAAGAGTCTGCTTCTTCTGTGAATGCTAATACTGATGCTACTAAAAA AGAAATTATGGATGGAGATGCAAACGGTAGTGTTAGTCCAAGCACTTATGGCAAGTCATC TTTAAGTAAAGAACCAGAAGCTAAGACTTTCTCTCCCAGTACTGAATCCTTGAAGAACCG CAAACAAAGCTCGGCCTCTGTGATATCTTCTTCCCCTGTAACCTCTCCTCAGAAACCATC CGATGTAGCCACTAATGGGAAGCCTTGGTCTAGCGTAGTAGCGTCTAGTGTAGATCCTCC TTATAAACCTTCATCTGTTATGACCTCTCCTGAGAAAACTTCTGATCCTGTAACTTCTCC TGGAAAGCCAAGTAAATCTCGCGCTGGTGCATTTTGGTCAGATCCACTACCGTCTTATCT GACTAAAGCTCCTCAAACATCAACTATGAAGACAGAGAAGTACGTGGAAAAAACACCTGA CGTAGCTAGTAGTGAAACTAACGAACCTGGCAAGGATGAAGAGAAGCCGCCTCCACTGGC TGGAGCAAATGTCATGAATGTGATATTGGTAGCAGCAGAGTGTGCTCCATTTTCGAAAAC AGGTGGCCTTGGAGATGTAGCTGGTGCTTTACCAAAGTCTTTGGCTAGGCGTGGACACAG GGTTATGGTTGTGGTTCCTCGGTATGCCGAGTATGCTGAAGCCAAAGATTTAGGGGTACG GAAGAGATATAAGGTGGCCGGGCAGGATATGGAAGTAATGTACTTCCATGCATTTATAGA TGGTGTGGATTTTGTTTTCATTGATAGCCCTGAATTTCGGCATCTGAGTAATAACATTTA TGGTGGAAACCGACTTGATATCTTGAAGCGGATGGTTTTATTTTGCAAGGCTGCTGTTGA GGTTCCGTGGTATGTTCCTTGTGGAGGTGTGTGTTATGGTGATGGAAATTTGGCTTTTAT AGCAAATGATTGGCACACTGCGTTACTACCGGTGTACCTGAAGGCCTATTACCGGGATCA CGGAATAATGAAATACACACGATCTGTTCTTGTAATTCATAACATTGCTCATCAGGGGCG GGGACCGGTAGATGATTTCTCCTACGTGGATTTACCGAGCCATTACTTGGATAGCTTCAA GTTATATGACCCAGTAGGAGGTGAGCACTTCAATATTTTTGCAGCTGGTCTAAAAGCTGC GGATAGAGTTCTCACTGTTAGCCATGGATACTCCTGGGAGGTTAAGACCTTAGAAGGAGG TTGGGGTCTGCATAACATCATAAATGAAAACGACTGGAAATTTAGAGGAATTGTGAACGG TATCGATACACAAGAATGGAACCCAGAATTTGATACTTACTTGCACTCTGATGATTATAC CAACTATTCCTTGGAGAATCTTCACATTGGTAAACCCCAATGTAAAGCTGCATTACAGAA AGAGCTCGGTTTGCCTGTTCGGCCTGATGTTCCGCTGATCGGTTTTATTGGAAGATTGGA TCACCAGAAAGGTGTTGATTTGATAGCTGAGGCGGTTCCATGGATGATGAGTCAGGATGT TCAGCTGGTTATGTTAGGCACAGGGCGACCGGATCTTGAAGAGGTCCTCAGACAAATGGA GCATCAATATCGAGATAAAGCACGGGGATGGGTTGGATTCTCGGTTAAAACAGCACACAG AATAACAGCTGGTGCAGACATATTGCTGATGCCTTCTAGATTTGAGCCGTGTGGTCTAAA CCAGCTTTACGCAATGAACTATGGAACCATTCCGGTGGTCCATGCCGTGGGAGGATTGAG GGATACAGTTCAACAATTTGATCCCTATAGTGAAACGGGTCTTGGTTGGACATTTGATAG CGCGGAAGCAGGTAAGTTGATTCATGCCTTAGGAAACTGTTTGTTGACATATAGAGAGTA TAAGGAGAGTTGGGAAGGGCTTCAGAGAAGAGGAATGACACAGGATTTGAGTTGGGATAA TGCTGCAGAGAAGTACGAAGAAGTTCTTGTTGCTGCTAAGTATCATTGGTGAGTTAAATA AAAGTTACCTTTTTTACTGTCTATAAAGAACATGTCTTTGGAATTGTTAAGAAGCTTAGT TGTGTAGATTTGGTGATAAAGCTACATTGGAGCTTGGCAAATTCTCATGCCATGTAAGCT CCTTGTGGTAAAGGATCAAGCTTGTTAATCTCTTGCTCTCTCACTCTTAGTAATTTTAAA GTGATATTACGATTTGACAAAGT