Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT2G47680.1
CDS Infomation	\| zinc finger (CCCH type) helicase family protein \| Chr2:19545828-19550871 REVERSE LENGTH=3048 \| 201606
Sequence	ATGGCGGTTTCTTCGCCGACTTCGTCTTCCAGCTCTTCTGAATCGTTACCTTTACCCTCC TCCAACTTCGCTTCGCTTCCGATTATGGCGATGAAAAGGAGAATCATCGACAAAATCCTC GAGAATCGCGTCACTCTCATCGTCGGCGAGCCTGGATGCGGGAAGAGTTCACAAGTTCCA CAGTTCCTTCTGGAAGCAAACATGGCTCCCATTTTGTGTACACAGCCTAGGAGATTTGCG GTTGTAGCTGTTGCTAAGATGGTTGCTAAATCTCGCAACTCCGATTTAGGTGGAGAAATT GGTTACCACATTGGGCATTCTAAGATTTTGACCGAAGGGTCGAAAATTCTGTTCAAAACT GCTGGAGTTCTGTTGGATGAAATGCTAGACAAGGGGTTGAATGCACTAAAGTACAAGGTT ATCATTCTTGATGAAGTGCATGAAAGATCTGTGGAGTCAGATCTTGTTCTTGTCTGTGTT AAGCAGTTTCTCATGAAGAATAATGACCTCAGGGTGGTCTTGATGTCTGCAACTGCTGAT ATAACAAGGTACAGAGACTACTTTAAAGAACTAGGCAGGGGTGAACGCGTAGAAGTAGTT GCTATTCCTAGCCCTGACCAGAGAACAATTTTCCAGCGAAGAGTATTATATCTTGAGCAG GTTGCAGGATTGCTTGGTGTGAGTTCTGATTTGTCAGCTTACTGTCCTGGTCCAAGTCCT TCTTCAGCTGATACTGAAATCAAACCTGAACTGCAAAATCTTATTCATGATCTTATCTTA TATATTCATGAAAAAGAACCAGACATTGAGAAGAGTATTTTGGTTTTCCTTCCGACATAC TACTCCCTTGAGCAGCAGTATCATCAATTGGAACCCTTTTTTGCATCTTTTGAGGTTCAC ATATTGCACCGAAGCATTGACACCGAGCAAGCCTTGGCGGCTATGAAGATATGCAGATCC CGCCGCAAGGTAATATTGGCTACAAACATTGCGGAATCTTCGGTAACAATACCCAAAGTA GCATATGTCATTGACTCGTGCCGGTCTCTGCAAGTGTTCTGGGATCCGTCCAGAAAAAGA GACGCAGTACAGCTTGTTTGGGTCTCTAGATCTCAGGCTGAGCAACGTAGAGGGAGGACA GGTCGAACATGTGATGGTGAGGTGTATCGCCTGGTGCCGAGTGCATTTTTTAACAAGCTT GAAGAACATGAGCCCCCATCTATACTTAAGCTGTCATTGAGACAACAAGTTCTCCATATT TGCTGCACGGAATCCAGAGCCATTAATGACGCAAATGCATTGCTGGCAAAAGCTATGGAT CCACCAGACCCAGATGTCGTTGACGATGCATTAAGGATGCTGTTAAGCATACAAGCATTG CGGAAATCGCCTAGGGGACGTTACGAGCCCACATTTTATGGACGGTTGCTTGCTAGCTTC CCATTGTCCTTTGATGCATCTATTCTGGTCGTCAAGTTTGGTGAAATGGGAATGCTAAGA CAAGGGATTCTATTAGGTGTCCTGATGGATACCCTACCACTTCCTATCCATCATCCTTTT GGAGATGATTCACTGTTTCTAGAGTATGTTGACCACTATTTTGGTGGCAGCAAGACCATT TCTGGTGGGCGGAGGGAGATGGTACTCATGGCAAACTTTTGTGCTTTTCAGTTTTGGCAA CGTGTCTTTAAGGATAAGCATCGTCTTGAAAACTTGAAACAACTCCTGTCAAAAGAGAAA GACAAAGATCTCAAGTTGATGTTTCCTGAGATTGAGAAAGAGTGGTGTGATTTCCACAAT ATTGCCCAGTCCTCGTTCTATCATGTGTCTGAGCTGTATGAAGATACACTTAGCTCATTT CATCGTTTTAGACCTCAATTCATCAGTTCCTCTGATTCTCAACCAACCTATTACAATCCA TATGAATTTGATCATACATGCTATATTGAGTGCCAACCCTCTGAAGATAAATATCTACAC TCTGAGGACGTAGATAACAATCAACCACCTCCTGAAGTAAGAAAATGTGTATCAGTGCCG TTTGTTCCTCCTAACGCATTCCAAGCAAATGCTATTGCAGAAAACATGGCCAGTATTATC AAAGAGATAAGAACTCAATGCACACCATCTGAATCTGATAATGGCCATGGAGCACTCGAA CCTGAGGATTACGTTGAGTATGGAGAGGCCCCAGTCTGTGTATATTTTCTTAATGGATAT TGTAACCGTGGTGGCCAGTGCACGTTCACTCATACTCTTCAGTCAACAAGACCAGCCTGC AAATTTTTCGCATCATCGCAGGGATGTCGAAATGGAGAATCGTGTTTGTTTTCCCACGCC ATGCGACGACGGACAACATCATACCTTCCACCTCCCCAATGCCTTCCAGAAGAAGATGGC TCTTCCACATCGCCCCTTCTGGATTTGTTTCCTACTTCTTCTGAGGGATGTATCCTTGTG TTCGATGACTCTGACATGCATTTCACCTCAAGTATAGCCAACCGTTATCCGTCCTGGAGA ATACTCTCAACATCATCGTCTTCAGAGACGCTTTTCTGTGATTCATCACTTGCAGACACA AGAATCTTCTGGGGTCTCAATCATCCCTACCAGACAATCATCTCAAAAGCAGGAAGGGAG AACCCAATCCCGTGGAACGAAGTGAAATGCGTGCTGTGGTTCCTTAACCCAGACAGCTAT GCTGATACTCCTGAGAAGCAGAAAACTATTCTGCAGAATTTCTTCGAGCACATGGCAATC AGATTACTCGGCGATAAGCTTTACAAAATCCGAGTAGTTCTCACAATGAACAACGTCAGA TTCTCACTCTTACAGGTTGAGAAGCTAGCCAGAGAAAGCTTCTTCTTCCTTGGAGAGTCT TTCCCACACGATTCAGAAAGCTTTGGTGCATTCCAAGACACATTAACAATCCAGAAGCCT ATGCTAGTCTCCAGACCAATCTCCTATGTCTTTAATCTCCATCCGCCTTCTGACATCCAG TTTGGTAACTACACCTCTCTTCTTCGCAAATCTCTTCACAACAAATGA

Peptide Sequence

PEP ID	AT2G47680.1
PEP Infomation	\| zinc finger (CCCH type) helicase family protein \| Chr2:19545828-19550871 REVERSE LENGTH=1015 \| 201606
Sequence	MAVSSPTSSSSSSESLPLPSSNFASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVP QFLLEANMAPILCTQPRRFAVVAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKT AGVLLDEMLDKGLNALKYKVIILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATAD ITRYRDYFKELGRGERVEVVAIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSAYCPGPSP SSADTEIKPELQNLIHDLILYIHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFFASFEVH ILHRSIDTEQALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKR DAVQLVWVSRSQAEQRRGRTGRTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHI CCTESRAINDANALLAKAMDPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASF PLSFDASILVVKFGEMGMLRQGILLGVLMDTLPLPIHHPFGDDSLFLEYVDHYFGGSKTI SGGRREMVLMANFCAFQFWQRVFKDKHRLENLKQLLSKEKDKDLKLMFPEIEKEWCDFHN IAQSSFYHVSELYEDTLSSFHRFRPQFISSSDSQPTYYNPYEFDHTCYIECQPSEDKYLH SEDVDNNQPPPEVRKCVSVPFVPPNAFQANAIAENMASIIKEIRTQCTPSESDNGHGALE PEDYVEYGEAPVCVYFLNGYCNRGGQCTFTHTLQSTRPACKFFASSQGCRNGESCLFSHA MRRRTTSYLPPPQCLPEEDGSSTSPLLDLFPTSSEGCILVFDDSDMHFTSSIANRYPSWR ILSTSSSSETLFCDSSLADTRIFWGLNHPYQTIISKAGRENPIPWNEVKCVLWFLNPDSY ADTPEKQKTILQNFFEHMAIRLLGDKLYKIRVVLTMNNVRFSLLQVEKLARESFFFLGES FPHDSESFGAFQDTLTIQKPMLVSRPISYVFNLHPPSDIQFGNYTSLLRKSLHNK

Transcript Sequence

Transcript ID	AT2G47680.1
Transcript Infomation	\| zinc finger (CCCH type) helicase family protein \| Chr2:19545656-19551171 REVERSE LENGTH=3520 \| 201606
Sequence	CTTTTTTGCCCATGATATATATATGTCCTTTCCTTAGTGGGACCTAGGTAATTCGCGGCA AGCTCTCCAGTGTGTGTATACACCCGCACACATTTTGACTAGTCAAACCTAGTCAACTTA TTAGACTTGAGAGATCAACGAGCGAGCTAAACGTACGCTCGTCGCACCTGATCGACGCTC CCCTAAAACCCCCCTAAAAGCGTAGAGAGGAAGGATGTGATTGGCAGTATTAGAAATACC AGAGACTGGACTAGACTCTGTGTGTAGAGGAAGAGAGACAGTGCTCCGCGTACGACAACA ATGGCGGTTTCTTCGCCGACTTCGTCTTCCAGCTCTTCTGAATCGTTACCTTTACCCTCC TCCAACTTCGCTTCGCTTCCGATTATGGCGATGAAAAGGAGAATCATCGACAAAATCCTC GAGAATCGCGTCACTCTCATCGTCGGCGAGCCTGGATGCGGGAAGAGTTCACAAGTTCCA CAGTTCCTTCTGGAAGCAAACATGGCTCCCATTTTGTGTACACAGCCTAGGAGATTTGCG GTTGTAGCTGTTGCTAAGATGGTTGCTAAATCTCGCAACTCCGATTTAGGTGGAGAAATT GGTTACCACATTGGGCATTCTAAGATTTTGACCGAAGGGTCGAAAATTCTGTTCAAAACT GCTGGAGTTCTGTTGGATGAAATGCTAGACAAGGGGTTGAATGCACTAAAGTACAAGGTT ATCATTCTTGATGAAGTGCATGAAAGATCTGTGGAGTCAGATCTTGTTCTTGTCTGTGTT AAGCAGTTTCTCATGAAGAATAATGACCTCAGGGTGGTCTTGATGTCTGCAACTGCTGAT ATAACAAGGTACAGAGACTACTTTAAAGAACTAGGCAGGGGTGAACGCGTAGAAGTAGTT GCTATTCCTAGCCCTGACCAGAGAACAATTTTCCAGCGAAGAGTATTATATCTTGAGCAG GTTGCAGGATTGCTTGGTGTGAGTTCTGATTTGTCAGCTTACTGTCCTGGTCCAAGTCCT TCTTCAGCTGATACTGAAATCAAACCTGAACTGCAAAATCTTATTCATGATCTTATCTTA TATATTCATGAAAAAGAACCAGACATTGAGAAGAGTATTTTGGTTTTCCTTCCGACATAC TACTCCCTTGAGCAGCAGTATCATCAATTGGAACCCTTTTTTGCATCTTTTGAGGTTCAC ATATTGCACCGAAGCATTGACACCGAGCAAGCCTTGGCGGCTATGAAGATATGCAGATCC CGCCGCAAGGTAATATTGGCTACAAACATTGCGGAATCTTCGGTAACAATACCCAAAGTA GCATATGTCATTGACTCGTGCCGGTCTCTGCAAGTGTTCTGGGATCCGTCCAGAAAAAGA GACGCAGTACAGCTTGTTTGGGTCTCTAGATCTCAGGCTGAGCAACGTAGAGGGAGGACA GGTCGAACATGTGATGGTGAGGTGTATCGCCTGGTGCCGAGTGCATTTTTTAACAAGCTT GAAGAACATGAGCCCCCATCTATACTTAAGCTGTCATTGAGACAACAAGTTCTCCATATT TGCTGCACGGAATCCAGAGCCATTAATGACGCAAATGCATTGCTGGCAAAAGCTATGGAT CCACCAGACCCAGATGTCGTTGACGATGCATTAAGGATGCTGTTAAGCATACAAGCATTG CGGAAATCGCCTAGGGGACGTTACGAGCCCACATTTTATGGACGGTTGCTTGCTAGCTTC CCATTGTCCTTTGATGCATCTATTCTGGTCGTCAAGTTTGGTGAAATGGGAATGCTAAGA CAAGGGATTCTATTAGGTGTCCTGATGGATACCCTACCACTTCCTATCCATCATCCTTTT GGAGATGATTCACTGTTTCTAGAGTATGTTGACCACTATTTTGGTGGCAGCAAGACCATT TCTGGTGGGCGGAGGGAGATGGTACTCATGGCAAACTTTTGTGCTTTTCAGTTTTGGCAA CGTGTCTTTAAGGATAAGCATCGTCTTGAAAACTTGAAACAACTCCTGTCAAAAGAGAAA GACAAAGATCTCAAGTTGATGTTTCCTGAGATTGAGAAAGAGTGGTGTGATTTCCACAAT ATTGCCCAGTCCTCGTTCTATCATGTGTCTGAGCTGTATGAAGATACACTTAGCTCATTT CATCGTTTTAGACCTCAATTCATCAGTTCCTCTGATTCTCAACCAACCTATTACAATCCA TATGAATTTGATCATACATGCTATATTGAGTGCCAACCCTCTGAAGATAAATATCTACAC TCTGAGGACGTAGATAACAATCAACCACCTCCTGAAGTAAGAAAATGTGTATCAGTGCCG TTTGTTCCTCCTAACGCATTCCAAGCAAATGCTATTGCAGAAAACATGGCCAGTATTATC AAAGAGATAAGAACTCAATGCACACCATCTGAATCTGATAATGGCCATGGAGCACTCGAA CCTGAGGATTACGTTGAGTATGGAGAGGCCCCAGTCTGTGTATATTTTCTTAATGGATAT TGTAACCGTGGTGGCCAGTGCACGTTCACTCATACTCTTCAGTCAACAAGACCAGCCTGC AAATTTTTCGCATCATCGCAGGGATGTCGAAATGGAGAATCGTGTTTGTTTTCCCACGCC ATGCGACGACGGACAACATCATACCTTCCACCTCCCCAATGCCTTCCAGAAGAAGATGGC TCTTCCACATCGCCCCTTCTGGATTTGTTTCCTACTTCTTCTGAGGGATGTATCCTTGTG TTCGATGACTCTGACATGCATTTCACCTCAAGTATAGCCAACCGTTATCCGTCCTGGAGA ATACTCTCAACATCATCGTCTTCAGAGACGCTTTTCTGTGATTCATCACTTGCAGACACA AGAATCTTCTGGGGTCTCAATCATCCCTACCAGACAATCATCTCAAAAGCAGGAAGGGAG AACCCAATCCCGTGGAACGAAGTGAAATGCGTGCTGTGGTTCCTTAACCCAGACAGCTAT GCTGATACTCCTGAGAAGCAGAAAACTATTCTGCAGAATTTCTTCGAGCACATGGCAATC AGATTACTCGGCGATAAGCTTTACAAAATCCGAGTAGTTCTCACAATGAACAACGTCAGA TTCTCACTCTTACAGGTTGAGAAGCTAGCCAGAGAAAGCTTCTTCTTCCTTGGAGAGTCT TTCCCACACGATTCAGAAAGCTTTGGTGCATTCCAAGACACATTAACAATCCAGAAGCCT ATGCTAGTCTCCAGACCAATCTCCTATGTCTTTAATCTCCATCCGCCTTCTGACATCCAG TTTGGTAACTACACCTCTCTTCTTCGCAAATCTCTTCACAACAAATGATCTCTTGGTGAG AAAGAAAAGACAAAAAAAAACTCTTACCTTTTGATACTTTTGTCGTCTCTGTTCCTAAGT CATCATATGTTTTGTGTTTCATGGCGATCAAGTGAATGGCCATAACCATGTAATTCATGT GACGATCTCTTACTTTTCTATCTGATGCTATCTTTAATTA