Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT2G46340.1
CDS Infomation	\| SPA (suppressor of phyA-105) protein family \| Chr2:19022572-19026821 REVERSE LENGTH=3090 \| 201606
Sequence	ATGCCTGTTATGGAAAGAGTAGCTGAAGAAACTGTGGCGACTAACAACATACAATTGAAA GCACGAGTGGATGATGTTCCTTGTAATAAGCTTGATGCTCGTCATAACGATATGGTGATT CAATCAGAAACTGCAAACAGTGATTGTCCTGGAAGCTCAGCTCACAGGAATGTTGATTTG ACTAAGCCGCCGCCTCCTGAGGAAGCCGCAGGAGCTAAGCTTTCTGTTGAAGAGTTGACA TTGGGGAACTACAGGATTGTTCAAGGGAGTAATAATACTAATGTGGATAGTCCTAGGGCT GGCAAGTTTGAGCATCTTTATCGTTTGGCTAGAGGGTCTGCTTTTAGGGCAGGAGATGGG GATCTTGATTCTCAACCTCGTGATATGGATCAAATGTTGTCCAGAATCAGACAACAGCTT GCTGGAGCTCCTTCTGAGAGGCAAAACTTGAAACCTTTTATGTCTAGGAGGAGCGATCAG AATCTTGAAGCTTTTTCTGAACGTCTAAGAGCAGCTGGTGAGAATAGTATTATGAATGCT CCTGCATTGATCAGTGAAGGTGTCCAAATGAAAACGCCGGTGAGTTCTTCGAATTTTTCT CAGTTGTTACTTAAAAGAGCTATGAAAGGGAAAGGGGTAGTAGGAAAGAACCAGGAAACT CCTCCTGAATTTGTCTCTGATCAAGATTTAGGAAGCAAGGAAAAAAAGTTGGATATTAGC AAGTCGCCTACTCCTCACGATGTGTTACCTCTAAAATCAAGTCCCAAAGGAAATGGTATG GTATCACATGGTGATGGGAATCATAGTAAATCTTCTATTGGAATCAGTTTGAGGGAGTTT CTTAGATCAAGTTATGCTAAAAGAGAAAAAAGACATGGCCTTTGTCTATTTAGGCAGCTG GTGGAACTGGTTGACTCAGCCCATTCAAAAAGATTATTCTTGCTAGACTTGAGACCATCC CTTTTCACTTTAGTTCCATCAAAGAAACTTAGATATATTGGTAATTTTGGAAAGAACGAT CTAGAATCAGATGTTGACGAAGATTTGAATAGGAGGAGGCCTGTTGTTGAGGAATCATCT AGTGGAGGTAGGGATTCGAAGAAAAGAAAAATGGACTTGCATTTGAATTCTCCAGGGAAT CAACTTCAGGCCACTTCAACCGGGCGACCTTTCAAAAGGAAAAGCCCTGTGATTGATTTA AACATGGTTGATGCACGTAATCCAGACAGTTGCGAGCTTCAACAGCAAGACTACATAAAA AATTTAAGCGTGTCTTCAGTGTCGAGAAAACAGTCTATGTCCACATGGCTAGAAGAGCAA TGGTATACTTGTCCAGAGGAGATAAATGGAGAAGATATTGGAGAAAAATCAAATATTTAT GCCCTTGGTGTTCTTCTGTTTGAGTTGCTATGCCATTGCGAGTCAGGCGAGATGCATGCT GCAATGATGGCAGATTTACGCCATCGGATTCTCCCACCAACATTTCTCTCGAAATACCCG AAGGAAGCTGGATTTTGTCTTTGGCTTCTACATCCTGAACCCTCCTCCCGACCATCAGCT AGAGATATACTAAAGTCAGAGTTGATATGCGAGGATGATTCAGTTAAATCGACTGCTGCT GCTGAGGAGATATCTGAGCTGTTACTTCATTTTTTGTCTTCATTAGAAGTGCAGAAGAAG AAAAAAGCATCTAAACTTTTGCAAGATATCCAGACCTTAGAGGATGATATTAAGGAGGCC GAGCGAAGATATTCTTCAAATGTATCTCTGGTGAGATCTCATGGAGCTATTGAAAAAAGG GTGCAATCATCTCCCCTAGACGAGCACTGTACAACTTCCAGTGCCTTGTTTGTACCAACT GCTAATACAGACAGGCTGATGAGTAATATCCGTCAACTTGAAGATGCATATTTTTTCATG CGATCACAAATCAACTTATCGAGTTCTGCTGCTACTGCCCGTTCTGACAAAACACTAAAG GACAGGGACAGATGCTCTGAAAACCAAAATGAAAATCAGGATATGAGTACCAAAGGAAAA TCTTCAGATCAACTCGAAGTGTTTTTCGAGGGGTTGTGCAAATTTGCTCGGTATAGCAAG TTCGAAACCTGTGGGACAATAAGAAGTGGGGACCTTTTAAACTCTGCAAGTGTGGTCTGC TCGTTGAGTTTTGACCCTGATGAAGAACACATAGCAGCAGCTGGGATATCAAAGAAGATC AAGATTTTTGACTTCAATGCATTTATGAATGAATCTGTCGGTGTTCATTATCCACTAGTA GAGATGGTCAACAAATCTAAATTAAGCTGTGTTTGCTGGAATAGCTACATCAAAAACTAC TTGGCCTCGACTGACTACGATGGTGTAGTTCAGATATGGGATGCCGGCACTGGACAAGGA TTTTCGCAGTACACAGAACACCAGAAGAGAGCCTGGTCAGTTGATTTTTCTCCATCTGAC CCGACAAAATTTGTTAGTGGAAGTGATGACTGCTCGGTGAAGCTTTGGAGCATCAATGAG AAACGTTCATTAGGCACAATCTGGAGTCCAGCAAATGTGTGTTGCGTGCAATTCTCTTCT TATTCCAATCACTTATTGGCATTTGGGTCAGCTGATTACAAGGTCTATTGCTATGACCTT CGGTATGTCAAAACACCTTGGTGCACATTGGCTGGTCATGAGAAAGCGGTGAGTTATGTT AAATTTATGGATTCAGAAACCATTGTTTCTGCTTCCACTGATAACTCTCTCAAGCTTTGG AATCTTAACAAGACAAATTCCTCTGGTTTATCTCCTGGTGCTTGTTCATTGACATATAAA GGACATACAAATCAGAAGAATTTCGTTGGATTGTCGGTTTTGGACGGATACATAGCTTGT GGTTCAGAGACCAATGAGGTATATAGTTACTATAAATCTTTACCGATGCCAATGACTTCA TACAAGTTTGGATCCGTCGATCCCATTTCTGGAAACGAATACTTTGATGACAATGGACAG TTTGTGTCGAGCGTCTGTTGGAGGAAAAAATCGAATATGCTTGTAGCTGCAAACTCTACT GGAAACATGAAGCTACTAAAACTTGTTTGA

Peptide Sequence

PEP ID	AT2G46340.1
PEP Infomation	\| SPA (suppressor of phyA-105) protein family \| Chr2:19022572-19026821 REVERSE LENGTH=1029 \| 201606
Sequence	MPVMERVAEETVATNNIQLKARVDDVPCNKLDARHNDMVIQSETANSDCPGSSAHRNVDL TKPPPPEEAAGAKLSVEELTLGNYRIVQGSNNTNVDSPRAGKFEHLYRLARGSAFRAGDG DLDSQPRDMDQMLSRIRQQLAGAPSERQNLKPFMSRRSDQNLEAFSERLRAAGENSIMNA PALISEGVQMKTPVSSSNFSQLLLKRAMKGKGVVGKNQETPPEFVSDQDLGSKEKKLDIS KSPTPHDVLPLKSSPKGNGMVSHGDGNHSKSSIGISLREFLRSSYAKREKRHGLCLFRQL VELVDSAHSKRLFLLDLRPSLFTLVPSKKLRYIGNFGKNDLESDVDEDLNRRRPVVEESS SGGRDSKKRKMDLHLNSPGNQLQATSTGRPFKRKSPVIDLNMVDARNPDSCELQQQDYIK NLSVSSVSRKQSMSTWLEEQWYTCPEEINGEDIGEKSNIYALGVLLFELLCHCESGEMHA AMMADLRHRILPPTFLSKYPKEAGFCLWLLHPEPSSRPSARDILKSELICEDDSVKSTAA AEEISELLLHFLSSLEVQKKKKASKLLQDIQTLEDDIKEAERRYSSNVSLVRSHGAIEKR VQSSPLDEHCTTSSALFVPTANTDRLMSNIRQLEDAYFFMRSQINLSSSAATARSDKTLK DRDRCSENQNENQDMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVC SLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNY LASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINE KRSLGTIWSPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYV KFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIAC GSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWRKKSNMLVAANST GNMKLLKLV

Transcript Sequence

Transcript ID	AT2G46340.1
Transcript Infomation	\| SPA (suppressor of phyA-105) protein family \| Chr2:19022154-19027528 REVERSE LENGTH=3933 \| 201606
Sequence	GAAAAAATTAAATAAAATAATGTTCAAAAAATTGTCCGCCAGAATAAAGAAAATTTGATA TGTGGCTTCAAAGCCTAAATTAATCATTAAAATAAAAAATCAGAAAATAAGGAATGAAGA ACGAATTGTGCAAAAGTCTATAGAGAAAGAGAGATTCATTTGTGTTTCTTCGACTATACA CAGAATACAAAAGAGATATTATATGTAATTATCAATAGTATATGACAAATTTATAGCCTC ACCTTTCTTCTTCTTCTTCTTCTTCTTCTGTGTGTTTTTGAATTTGCTTTCTTCAAGAGG TTTCTTCTCCACACCGCTTCGGTGTATGATCTGATTGTGATCTCTCTCGATATCTGGGAT CTTCGGGGTATGGAGGCTGTAGATTATTATTATTATTACGTGTGGTGCTGATGCAATGAG TGTTGATGCCTGTTATGGAAAGAGTAGCTGAAGAAACTGTGGCGACTAACAACATACAAT TGAAAGCACGAGTGGATGATGTTCCTTGTAATAAGCTTGATGCTCGTCATAACGATATGG TGATTCAATCAGAAACTGCAAACAGTGATTGTCCTGGAAGCTCAGCTCACAGGAATGTTG ATTTGACTAAGCCGCCGCCTCCTGAGGAAGCCGCAGGAGCTAAGCTTTCTGTTGAAGAGT TGACATTGGGGAACTACAGGATTGTTCAAGGGAGTAATAATACTAATGTGGATAGTCCTA GGGCTGGCAAGTTTGAGCATCTTTATCGTTTGGCTAGAGGGTCTGCTTTTAGGGCAGGAG ATGGGGATCTTGATTCTCAACCTCGTGATATGGATCAAATGTTGTCCAGAATCAGACAAC AGCTTGCTGGAGCTCCTTCTGAGAGGCAAAACTTGAAACCTTTTATGTCTAGGAGGAGCG ATCAGAATCTTGAAGCTTTTTCTGAACGTCTAAGAGCAGCTGGTGAGAATAGTATTATGA ATGCTCCTGCATTGATCAGTGAAGGTGTCCAAATGAAAACGCCGGTGAGTTCTTCGAATT TTTCTCAGTTGTTACTTAAAAGAGCTATGAAAGGGAAAGGGGTAGTAGGAAAGAACCAGG AAACTCCTCCTGAATTTGTCTCTGATCAAGATTTAGGAAGCAAGGAAAAAAAGTTGGATA TTAGCAAGTCGCCTACTCCTCACGATGTGTTACCTCTAAAATCAAGTCCCAAAGGAAATG GTATGGTATCACATGGTGATGGGAATCATAGTAAATCTTCTATTGGAATCAGTTTGAGGG AGTTTCTTAGATCAAGTTATGCTAAAAGAGAAAAAAGACATGGCCTTTGTCTATTTAGGC AGCTGGTGGAACTGGTTGACTCAGCCCATTCAAAAAGATTATTCTTGCTAGACTTGAGAC CATCCCTTTTCACTTTAGTTCCATCAAAGAAACTTAGATATATTGGTAATTTTGGAAAGA ACGATCTAGAATCAGATGTTGACGAAGATTTGAATAGGAGGAGGCCTGTTGTTGAGGAAT CATCTAGTGGAGGTAGGGATTCGAAGAAAAGAAAAATGGACTTGCATTTGAATTCTCCAG GGAATCAACTTCAGGCCACTTCAACCGGGCGACCTTTCAAAAGGAAAAGCCCTGTGATTG ATTTAAACATGGTTGATGCACGTAATCCAGACAGTTGCGAGCTTCAACAGCAAGACTACA TAAAAAATTTAAGCGTGTCTTCAGTGTCGAGAAAACAGTCTATGTCCACATGGCTAGAAG AGCAATGGTATACTTGTCCAGAGGAGATAAATGGAGAAGATATTGGAGAAAAATCAAATA TTTATGCCCTTGGTGTTCTTCTGTTTGAGTTGCTATGCCATTGCGAGTCAGGCGAGATGC ATGCTGCAATGATGGCAGATTTACGCCATCGGATTCTCCCACCAACATTTCTCTCGAAAT ACCCGAAGGAAGCTGGATTTTGTCTTTGGCTTCTACATCCTGAACCCTCCTCCCGACCAT CAGCTAGAGATATACTAAAGTCAGAGTTGATATGCGAGGATGATTCAGTTAAATCGACTG CTGCTGCTGAGGAGATATCTGAGCTGTTACTTCATTTTTTGTCTTCATTAGAAGTGCAGA AGAAGAAAAAAGCATCTAAACTTTTGCAAGATATCCAGACCTTAGAGGATGATATTAAGG AGGCCGAGCGAAGATATTCTTCAAATGTATCTCTGGTGAGATCTCATGGAGCTATTGAAA AAAGGGTGCAATCATCTCCCCTAGACGAGCACTGTACAACTTCCAGTGCCTTGTTTGTAC CAACTGCTAATACAGACAGGCTGATGAGTAATATCCGTCAACTTGAAGATGCATATTTTT TCATGCGATCACAAATCAACTTATCGAGTTCTGCTGCTACTGCCCGTTCTGACAAAACAC TAAAGGACAGGGACAGATGCTCTGAAAACCAAAATGAAAATCAGGATATGAGTACCAAAG GAAAATCTTCAGATCAACTCGAAGTGTTTTTCGAGGGGTTGTGCAAATTTGCTCGGTATA GCAAGTTCGAAACCTGTGGGACAATAAGAAGTGGGGACCTTTTAAACTCTGCAAGTGTGG TCTGCTCGTTGAGTTTTGACCCTGATGAAGAACACATAGCAGCAGCTGGGATATCAAAGA AGATCAAGATTTTTGACTTCAATGCATTTATGAATGAATCTGTCGGTGTTCATTATCCAC TAGTAGAGATGGTCAACAAATCTAAATTAAGCTGTGTTTGCTGGAATAGCTACATCAAAA ACTACTTGGCCTCGACTGACTACGATGGTGTAGTTCAGATATGGGATGCCGGCACTGGAC AAGGATTTTCGCAGTACACAGAACACCAGAAGAGAGCCTGGTCAGTTGATTTTTCTCCAT CTGACCCGACAAAATTTGTTAGTGGAAGTGATGACTGCTCGGTGAAGCTTTGGAGCATCA ATGAGAAACGTTCATTAGGCACAATCTGGAGTCCAGCAAATGTGTGTTGCGTGCAATTCT CTTCTTATTCCAATCACTTATTGGCATTTGGGTCAGCTGATTACAAGGTCTATTGCTATG ACCTTCGGTATGTCAAAACACCTTGGTGCACATTGGCTGGTCATGAGAAAGCGGTGAGTT ATGTTAAATTTATGGATTCAGAAACCATTGTTTCTGCTTCCACTGATAACTCTCTCAAGC TTTGGAATCTTAACAAGACAAATTCCTCTGGTTTATCTCCTGGTGCTTGTTCATTGACAT ATAAAGGACATACAAATCAGAAGAATTTCGTTGGATTGTCGGTTTTGGACGGATACATAG CTTGTGGTTCAGAGACCAATGAGGTATATAGTTACTATAAATCTTTACCGATGCCAATGA CTTCATACAAGTTTGGATCCGTCGATCCCATTTCTGGAAACGAATACTTTGATGACAATG GACAGTTTGTGTCGAGCGTCTGTTGGAGGAAAAAATCGAATATGCTTGTAGCTGCAAACT CTACTGGAAACATGAAGCTACTAAAACTTGTTTGACAACTTGGCCTTTTCGCTACTACTG CGGGCATTGGACTTTTTGAGTCTGAAACTAGGACAAAGCAGGTCTGACTTTGAAGCAAAC GTTTTTGTCCTGGAAACTATGATCCCATATGACCAGAAGAGAAAAAAAGTTCGAAATCTT GGAGAAGTTGAAGAAGCAAAACTGTCTGTGATAATATATTATTTGATTCTTCTTCCTGTA ATTCTATATATATGAGATATAATTTGAGATAAACTTCTCAGATTCTTCAGAAATGATTCA TATTTGGTCGGCATAACGTGTAATGATGAGAGGTATATAACTTGTACAAGTGTGTTATAT CGTTAGCTCGGTTATGTAATTGTTGTTGGAGATTCTCTATAAGAGAGAAAATATATATAT CATCCATTCATTTCATCGCATGGCTACTACCTC