Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT2G39810.1
CDS Infomation	\| ubiquitin-protein ligase \| Chr2:16612941-16617802 FORWARD LENGTH=2784 \| 201606
Sequence	ATGGATACGAGAGAAATCAACGGTTTTGCCTCCGCCGCGAGATCGATATCTCTTCCTACG CAGCCTAATTACAGTAGCAAGCCTGTTCAGGAGGCGTTGAAACATTTGGCATCTATAAAC CTCAGAGAATTATGTAATGAGGCAAAAGTTGAGCGATGTCGTGCAACAAGAGACTTAGCT AGCTGTGGAAGATTTGTGAACTATGTGTTGAATCCATGTGGTCATGCCTCCTTGTGCACA GAGTGTTGTCAGAGGTGTGATGTTTGTCCTATCTGTAGAAGTACGCTACCAAAATTTGGA GATAGACTTAGGCTTCGTCTCTATTATGAGTGTGTTGAAGCTGGTTTGATTTCCCGAACA CATGAAGAGGCGTCACAGGATTCGGATGAGGATGAACATCAATTGGCAGCTGATGTTCAT CGCCTTTATTCTCTGTTTGATGTTGCTATGAACAATAATTTGATCTCGGTGGTTTGCCAT TATATCACCAATGTCTGTATGGATGAGACAGCTGTATCTAGTGATCCGGTCATTGCTTTC TTGCTGGATGAAGTTGTTGTCAAGGATTGGGTCAAGCGTACATTCCGGAGCACCTTAGCT GAACTTCAAGAAATCTATAATCTTGAAACAAAAGAGATGCAAGCGTGGTTAGATAAACTC CTAAGGTGTTCCAAACAGGTGGCTGGCATATGTAGTGTGCTCGAAGTTATGGAATCAGCT TTTAAGGGTTCTGTGTCACCTCAGCTTCAAGATGTGCAGACGCTGAGAGAGAACATTGGT AAAACAAAGCAGCATTTGGACATAATGGTCTGGTGCATCAGACATGGATTTCTGGATGAT GTGAGGTCTCGATATTCGAATTTCACATCGTGGAATGCACTGGTAGGGGAAAGAAAATCA AATGCAGTTAAGCGTGCATGGCCTGATGCTGTAGACCAGTCTTCAGATTGCAGTGTACAG AGTGCTTCCCTCTTTATTGAGGATGCTTTAGAAAATCTTGAGAGAGAGCCAGAATACAGT CAGGAAATAGGTGCCGACCTAGAAGTTGGACGTTTACAGAAGGATAAGAGATCATTTCTT AGGTCCAAAATAGAGGGAACTTCAGGATCTTATCCATTTGAGAATCTTAGAACTGCTGCT GACATGCTCTTTTTACATGGCGGTTCAGATTTGGTTGTTGCGAAGCAAGCAATTTTTCTT TACTACCTGTTTGATCGGCATTGGACTACCCCTGAAAAATATTGGAAGCACACTATAGAT GATTTTGCTGCTACGTTTGGCATAACGAGGCATTCATTGCTGGAGTCTTTTGTATTTTAT CTTCTCGATGATCACTCAGAGGAGGCACTCCAGGAAGCTTGTAGGATTCTACCTGAAATA TGCGGTCCAGAAACCTACCCCAAAGTTGCGCAAGTCCTGTTAGAAAGGGATAACCCTGAA ACAGCTCTTATGGTCTTGCGTTGGTCTGGTCGTGATGGTGTATCAGAATTGGTTTCAATT GGTGAAGCTGTCACAGCTCTTCGTGTGAGAGTGGAATGTGGTCTTTTGAGTGAAGCATTC ACATACCAAAGGACACTCTGCTTGAAAGTAAAGGAAAATAATTTGAAAAATGGAGCTGTG AAACATGCGTCTGATGATCTAGACATCTGGAGTTGGACGGAATGGATGGAGATACTTGTC AATGAATTCTGCTGTCTTTCTATTCGGAGAAACTTGGTTGATCGAATCATTGAGTTACCG TGGAACCCAGATGAGGAGAAATATCTGCACAGATGCTTATTAGATTCGGCAACTGATGAC CCCTCATCAGCTGTGGGTAGTCTCTTGGTTGTCTTTTATCTTCAGCGCTACCGTTACATC CAGGCATACCAAGTCGATCTTAGGCTTCAGAAAATCGAAGAGGCTTTCGTATCCGACAAT CAAATTGGGGAAGAAGTTATGTTCAGAATGCGATCACAGAGTCATTGGAGAAAAGAGTTA GTTGATAGAGCCATAGATATACTTCCAGTAATTCAGCAGCAGCAAGTTAGATCTGGACAA TTTTCTGAGATGGAAGATGCCTCTGAAGGAGCAAAAAAATCTGATCTTCCTGATGCACCT GACATGATTACTTCTTCAGTTCCCTTTGCCACTACTAATTCCGTTTTTCTCCAAAGTGCT AACAATGCCAGAGCTAGAGAGCCAGTGGCTAATAATGGCAGTCCTTTTCAACCTGGTCAT ATGATAGGAAACGCGTCCCATGATCTTTCACATGGAAGGTTATTTACAAACGCAAATAGA GGACAAAAGAGTGAAGTTAGAAGCGTAACCAAGAATCTGAAATTCGGTGAAATGTCAACT CCGTTCAAAGATCTAAATAGAGCTCGTGGGAACAGCCAGCTCCAAGGGAAAAGGACTGAA GAATCCTCTCCAGAAGTAAATGTTGATAGATACATAGAGAATAATATGAGCTCTCCTTAT CTCCGCCGAATCACAGCTAACAATCCCGTGACAGTGAAATCTAGCAGCAACCATCTCAAT GGATCTTCACAGAAACCGGAATCCACCTTTTTTGGCACAAGGATGCAACCAGACAAAGAT AACTTTGTTGATTTGGATGATCCAATGGACATGTCTTCGAGCTTAAAGGACAACAACAAC AATGTCTTGGCCACGGAGAGCAGAAATAACAGTGGTGGATTGAGATGGCGGTCAGATGAA ACAAGCGATGACGAAGATGAACTGACTAGTTTTGGTTCCATGCCGGTGAAGGGAAGGAGG AGACGTAGATTCGCAGCAAGATGA

Peptide Sequence

PEP ID	AT2G39810.1
PEP Infomation	\| ubiquitin-protein ligase \| Chr2:16612941-16617802 FORWARD LENGTH=927 \| 201606
Sequence	MDTREINGFASAARSISLPTQPNYSSKPVQEALKHLASINLRELCNEAKVERCRATRDLA SCGRFVNYVLNPCGHASLCTECCQRCDVCPICRSTLPKFGDRLRLRLYYECVEAGLISRT HEEASQDSDEDEHQLAADVHRLYSLFDVAMNNNLISVVCHYITNVCMDETAVSSDPVIAF LLDEVVVKDWVKRTFRSTLAELQEIYNLETKEMQAWLDKLLRCSKQVAGICSVLEVMESA FKGSVSPQLQDVQTLRENIGKTKQHLDIMVWCIRHGFLDDVRSRYSNFTSWNALVGERKS NAVKRAWPDAVDQSSDCSVQSASLFIEDALENLEREPEYSQEIGADLEVGRLQKDKRSFL RSKIEGTSGSYPFENLRTAADMLFLHGGSDLVVAKQAIFLYYLFDRHWTTPEKYWKHTID DFAATFGITRHSLLESFVFYLLDDHSEEALQEACRILPEICGPETYPKVAQVLLERDNPE TALMVLRWSGRDGVSELVSIGEAVTALRVRVECGLLSEAFTYQRTLCLKVKENNLKNGAV KHASDDLDIWSWTEWMEILVNEFCCLSIRRNLVDRIIELPWNPDEEKYLHRCLLDSATDD PSSAVGSLLVVFYLQRYRYIQAYQVDLRLQKIEEAFVSDNQIGEEVMFRMRSQSHWRKEL VDRAIDILPVIQQQQVRSGQFSEMEDASEGAKKSDLPDAPDMITSSVPFATTNSVFLQSA NNARAREPVANNGSPFQPGHMIGNASHDLSHGRLFTNANRGQKSEVRSVTKNLKFGEMST PFKDLNRARGNSQLQGKRTEESSPEVNVDRYIENNMSSPYLRRITANNPVTVKSSSNHLN GSSQKPESTFFGTRMQPDKDNFVDLDDPMDMSSSLKDNNNNVLATESRNNSGGLRWRSDE TSDDEDELTSFGSMPVKGRRRRRFAAR

Transcript Sequence

Transcript ID	AT2G39810.1
Transcript Infomation	\| ubiquitin-protein ligase \| Chr2:16612777-16618122 FORWARD LENGTH=3268 \| 201606
Sequence	CGACTTGACCCGTTTGAGGAGAAATTCACTCAACAGTGTTTCCTCTCTTCGTCTTCCCTC CCGAGAAAGCTCAACGGAGCCCTAGACTGGTTTTATCACTCTCGCCAACACCAACCACGC TTTTTCTCTCTTTACCTCCATTTTTGTATTCGTCACCGGAGTAGATGGATACGAGAGAAA TCAACGGTTTTGCCTCCGCCGCGAGATCGATATCTCTTCCTACGCAGCCTAATTACAGTA GCAAGCCTGTTCAGGAGGCGTTGAAACATTTGGCATCTATAAACCTCAGAGAATTATGTA ATGAGGCAAAAGTTGAGCGATGTCGTGCAACAAGAGACTTAGCTAGCTGTGGAAGATTTG TGAACTATGTGTTGAATCCATGTGGTCATGCCTCCTTGTGCACAGAGTGTTGTCAGAGGT GTGATGTTTGTCCTATCTGTAGAAGTACGCTACCAAAATTTGGAGATAGACTTAGGCTTC GTCTCTATTATGAGTGTGTTGAAGCTGGTTTGATTTCCCGAACACATGAAGAGGCGTCAC AGGATTCGGATGAGGATGAACATCAATTGGCAGCTGATGTTCATCGCCTTTATTCTCTGT TTGATGTTGCTATGAACAATAATTTGATCTCGGTGGTTTGCCATTATATCACCAATGTCT GTATGGATGAGACAGCTGTATCTAGTGATCCGGTCATTGCTTTCTTGCTGGATGAAGTTG TTGTCAAGGATTGGGTCAAGCGTACATTCCGGAGCACCTTAGCTGAACTTCAAGAAATCT ATAATCTTGAAACAAAAGAGATGCAAGCGTGGTTAGATAAACTCCTAAGGTGTTCCAAAC AGGTGGCTGGCATATGTAGTGTGCTCGAAGTTATGGAATCAGCTTTTAAGGGTTCTGTGT CACCTCAGCTTCAAGATGTGCAGACGCTGAGAGAGAACATTGGTAAAACAAAGCAGCATT TGGACATAATGGTCTGGTGCATCAGACATGGATTTCTGGATGATGTGAGGTCTCGATATT CGAATTTCACATCGTGGAATGCACTGGTAGGGGAAAGAAAATCAAATGCAGTTAAGCGTG CATGGCCTGATGCTGTAGACCAGTCTTCAGATTGCAGTGTACAGAGTGCTTCCCTCTTTA TTGAGGATGCTTTAGAAAATCTTGAGAGAGAGCCAGAATACAGTCAGGAAATAGGTGCCG ACCTAGAAGTTGGACGTTTACAGAAGGATAAGAGATCATTTCTTAGGTCCAAAATAGAGG GAACTTCAGGATCTTATCCATTTGAGAATCTTAGAACTGCTGCTGACATGCTCTTTTTAC ATGGCGGTTCAGATTTGGTTGTTGCGAAGCAAGCAATTTTTCTTTACTACCTGTTTGATC GGCATTGGACTACCCCTGAAAAATATTGGAAGCACACTATAGATGATTTTGCTGCTACGT TTGGCATAACGAGGCATTCATTGCTGGAGTCTTTTGTATTTTATCTTCTCGATGATCACT CAGAGGAGGCACTCCAGGAAGCTTGTAGGATTCTACCTGAAATATGCGGTCCAGAAACCT ACCCCAAAGTTGCGCAAGTCCTGTTAGAAAGGGATAACCCTGAAACAGCTCTTATGGTCT TGCGTTGGTCTGGTCGTGATGGTGTATCAGAATTGGTTTCAATTGGTGAAGCTGTCACAG CTCTTCGTGTGAGAGTGGAATGTGGTCTTTTGAGTGAAGCATTCACATACCAAAGGACAC TCTGCTTGAAAGTAAAGGAAAATAATTTGAAAAATGGAGCTGTGAAACATGCGTCTGATG ATCTAGACATCTGGAGTTGGACGGAATGGATGGAGATACTTGTCAATGAATTCTGCTGTC TTTCTATTCGGAGAAACTTGGTTGATCGAATCATTGAGTTACCGTGGAACCCAGATGAGG AGAAATATCTGCACAGATGCTTATTAGATTCGGCAACTGATGACCCCTCATCAGCTGTGG GTAGTCTCTTGGTTGTCTTTTATCTTCAGCGCTACCGTTACATCCAGGCATACCAAGTCG ATCTTAGGCTTCAGAAAATCGAAGAGGCTTTCGTATCCGACAATCAAATTGGGGAAGAAG TTATGTTCAGAATGCGATCACAGAGTCATTGGAGAAAAGAGTTAGTTGATAGAGCCATAG ATATACTTCCAGTAATTCAGCAGCAGCAAGTTAGATCTGGACAATTTTCTGAGATGGAAG ATGCCTCTGAAGGAGCAAAAAAATCTGATCTTCCTGATGCACCTGACATGATTACTTCTT CAGTTCCCTTTGCCACTACTAATTCCGTTTTTCTCCAAAGTGCTAACAATGCCAGAGCTA GAGAGCCAGTGGCTAATAATGGCAGTCCTTTTCAACCTGGTCATATGATAGGAAACGCGT CCCATGATCTTTCACATGGAAGGTTATTTACAAACGCAAATAGAGGACAAAAGAGTGAAG TTAGAAGCGTAACCAAGAATCTGAAATTCGGTGAAATGTCAACTCCGTTCAAAGATCTAA ATAGAGCTCGTGGGAACAGCCAGCTCCAAGGGAAAAGGACTGAAGAATCCTCTCCAGAAG TAAATGTTGATAGATACATAGAGAATAATATGAGCTCTCCTTATCTCCGCCGAATCACAG CTAACAATCCCGTGACAGTGAAATCTAGCAGCAACCATCTCAATGGATCTTCACAGAAAC CGGAATCCACCTTTTTTGGCACAAGGATGCAACCAGACAAAGATAACTTTGTTGATTTGG ATGATCCAATGGACATGTCTTCGAGCTTAAAGGACAACAACAACAATGTCTTGGCCACGG AGAGCAGAAATAACAGTGGTGGATTGAGATGGCGGTCAGATGAAACAAGCGATGACGAAG ATGAACTGACTAGTTTTGGTTCCATGCCGGTGAAGGGAAGGAGGAGACGTAGATTCGCAG CAAGATGAAATGAAACAAACACTCGAAAAGACCATCATCAATTATGTTTAAAGCATAGAG AAAGAGAGAGAGAGGTAGAGCAAGTTGTGTAAAGAGGGGAGAGAGACTGTTACAGTGAGC GTTGTTCTCCTGTTATTTTTTGTGCTGAATTTTGTGTATTTCTTCTCTAGTCTACCTTTT TTGGACAGTTATTTTAAAGATATCATTGTGATGAGCGGAGTGATATTATTATTATGAGTA TGTTTAATTTCTTATATTGGTGCAGCTGATTGTTGAATCGTAGAAGTTATAACAACACAT TGAGATTAAATCATTTTCTTTTTACATT