Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT2G38440.1
CDS Infomation	\| SCAR homolog 2 \| Chr2:16095550-16100851 FORWARD LENGTH=4200 \| 201606
Sequence	ATGCCGTTGACGAGGTACCAATCTCGTAACGAGTATGGATTAGCAGATCCGGATCTGTAT CAAGCTGCTGATAAAGATGACCCTGAAGCTCTGCTTGAAGGAGTCGCTATGGCTGGTCTC GTTGGCATTTTGCGTCAACTCGGTGATCTCGCTGAGTTTGCTGCTGAGATGTTTCATGAC TTGCACGAAGAAGTAATGGCTACTGCTTCTAGAAGCCATGGTTTAATGGCTCGTGTGCAA CAGTTGGAAGCAGAGTTTCCTTCTATAGAGAAGGCATTACTGTGTCAAACCGATCATTCG CCGTTTTTCTCTAACAAAGGTGTGGAATGGCATCCGAATCTACAATTGGAACAGAGTGTG GTTACAAGTGGTGACTTACCTCGTTGTGTGATGGATTCTTATGAGGAATGTCGAGGTCCT CCAAGGCTATTTCTTCTGGACAAGTTTGATATTTCCGGAGCTGGGGCTTGTTTGAAACGC TACACCGATCCATCGTTTGTTAGGCTTGAAACGTCTTCATATGAAGAATCATGGGATGAT ATTCAGAGAGAGAAAAAATCACAGAAAGCAAAGAGGAGAGCATCTCAGTGGAGGAATGGA GGGACACCTGAAAATGCATTATCATCACATGCCAAATTGCATGAATTGTTTTTGGAGGAG CATTTAGAGGCTCATCATTCAGATCCAGCGCGCGTTGTGAAGTTGAAAACCAGAAAGCTA GATGGGTGTTCCCTTATTTCAAAATCAGGGGAAAGCTACATGGAGAAATTTGTGCAGACA CGTGTAGATAGTAAGATAAGTTATGAAATAATTACCCAAAACCCCGGATTGTTGACATGG AATATGGATAGTGCTAGAGATGTAGTAACCGATATACCTGAAATCAGTATGGTGGGTGCT ATGGATAAGTCTCATGGAGGAAGCAGAGCAGAGGTTTCATTCCCAAGTGAGCAGGAAAAT GTGGCAAATGTTAACATGAATGGGGGTTTTATTGAAAAAGATATAGAGACAGTGCCTGAA TCTACATACAATGAGGTCCGTGGAACAACTATTACACAGGATTCACAAACGGTTTTGAAC GGGAAGCCAGGATTTTTTCAACAGAGGAGTTATTCTGAAGATTTAACCAGTGAGGCTGAC AATTATGTGGACGCACCAGCCACCATGGAGTCGGAAACAGAAACAGACGATGAGTGTAGA CCTAAGAGTAGATCAGATACTTTGAAGGATGGGAACCATCATATATATTCTGATGCGGTT GAAGAGAGAATGGAGGACCCACCTCAGTTTTCATTTTCTCATTCAAATGGAAACACACCA GTTTCGGAAAATGGGCGAAGCTCGTTTGGGAAAAAGAGCACTAGTTATTCTTACTCGGAC ACTGCAAGCATATCCATTGATGATCAATCTGATGGAGAGAAACTTTCGGGATGTTTACCT TCTACTTCTAGTTTTAAGAGTGAGTTGGTGGATTCTATGTCTCACGTTACTCCTGAAGCC AACAAAGTGTCTCATGACTTGAATGTTCAGGAATCAGTTAGTAGCAGCAATGTAGATGGC CAGACATCATTAAGTTCGAATGGTACATGTTCAAGTCCAAGGCCAGTCTCTCAGAATGAT CAATCATGTTCACTGACAGTTCAATCTTTAGCATCAGAAGTCGTTGAAACTTCTCCAGAA CTTGTTAGGCTTGATCTAATGAAGGGAGGCAATGATGGAAGAAAGGTGGATCCATTCGAT TCTTCAAAATCTTGTGCATCTTTTGATGCTAAAAACTCTGACTTGCCTTCTGAAACTTCA TCAATTAGTTCAACTTCTGAAGGAAGCAGATGTGATAGTACCATTGAGAAGAACTGTATG GTTGCTTCAAATTTAGTAAACTCAGGCACTAGTCCTCAAGCGTTTGTTGATAGTCAAACT GGTAAACAGTTACCTATCGCTGATACTGATTTTGAGACAAACTCTATAGTTGCTTGTTCT GAAGTTTTAGCAAACTCAGGCAGCGATCCTGAAGAACGTGATGGTCGTTGCCTAACAGGA AAGCTGGTACCTTGCTCAGCTGGGGTGGGGATGGAAGTTTCCCCTGATACGCCCTCTAAA GTCTGTGGTCCAAGTTCAGCTGATGGAATTCACTTAAAAGATACTCTGGATGATGAAACC GATTGTGTTTCAGTGACTAATGTTGTTGTTGACGTTGATTCTAAAAATTCTGTTGCCGAC GTTGGTTCTCAAAGTTCAGTTGCTGACATTGATTCTCAAAGTTCAGTTGCTGAGATCTCC GATGAGCATTCATGTGCCTTTGGCAACACGGCTGATGTGTCTGTTTCAGAGTCCCATGAA GACACACTAGAGAATGGAATGTCCGTGCCTTCTGATTTTAACTCGGGAGTAGAGAAATTG GCGGGAGATGCTTCACCTACTTGTAGCAAATGCGATGACCATATCTCTCATGAAGGTTTT CATGACCTTTCAGGGCTGGACAACGCAACCACAGACATTGTCCCGAACGTTGAGCTTGAT GTGTCTGATAATGACAATGACACTTCCAGTGGTGGTGTTAATCATGCCGTTAGTCTGTCA TCGACTCGTGGGAAGGGTTCTCTGCCTTGGATTTCGACCAATACTTATCAATCGTCTTCT GATGCTGGAGAGATTTTCCATGATACAGTTGTAGAGTCTGACGGGACACTACTGGAAGAC AATAATCCAGAGTCGGAAATAAAAATGCATAAAAGCCCTCTGGAAGTGTCTTCAGAAGGT CTGAGTACTGAACCAGACAACAAGGACGTAGAAAGTATTGAATCTACAAGTCCCAAGCCA TCTCTGGATCAAAGGAACAGGGACACAGAAACCAAATCTCCTGGTGAGAGCATTCTTGAT GATAATTGCATAGATTCCACACAAGTGTATAATCTGAACCTTTTAGAGAGTGAGGCTATC GACCAGGCAGTTAGAGAGCAAACATCTTATGCAAGCCATGAAGTTGCAGATGAGGAATTG CTGCAGTCAAATGTTTTCAGGGGCTTAGAGTTTGAACCACAATCAGCAGGCTTAGAATTT GCACCACAATCTGCAGGTATAGAATTGAACAGACCTAAGCAAGAGTTGAATCTGGATCCT ACTTTTCCTAGCTTTGGTTTTATCCCTGAGACTATTCCGCCCAATCCAGAGGACATGCCA CCCCTTCCTCCTATGCAATGGCTTATTGGAAAGGTTCCACATTCTTTTCCTACCTTCATG GGGGAATCAGTCGAAACCAGTAGTTCTGCTTTATCAGCGGCACCACCCATTGGTTCTAGC TTGAATGTTCAAATTGGGTCTCCACCATCAGAGCTATCTGTATCTTTAGGAAGTGACGAA TCAGAACGACTTCCTGGAGGGTTTGTTCACAATGCATCAGAAAAGCCATTGCAATCATCC ATTCAGTTCCCAACCATGAGCACTGATTTGAATAGTCAATACGACAGTTCTGAGCTCCCT ACAATACCTTATCAGGAGTGCATAGAGGATTTTGGTTCTGAGGAGAACAATCTTTTGGCT GACCATGCAGCTCAGAACCACGAGCTCGTTTACTCTCAAGCGTCGTCATTGCAGCTGCCT CAGGTTAAACACGAAGATTTCAAGGACGATGCTGATGTGCATGAATCTCAAAGTTCAAGC GATGATCACCATTGTCCTGAAACCAAATCCCTGACGCCAACTCAATCAACAAAGGTAGAA GATAAGGGTCATTCGGTTCCTGATGCTTCAAATGCAGAAACTGCAGAATCATCAAACACG TCAGTTCAGAAGATAAATCCTGTTTCAGTGGGAGATGCTATGTGGCCTGTTAGCTGTTTC TCTGTGGCACCTACCTTGGACACATATAAGACAGAAGTGGTCCCTACGGTTAGGCTTCCT AGGCCAAGAAGTCCGCTTGTCGATGCTGTTGCAGCTCATGACAGACGCAAGATGAAGAAA GTCTCTGAGATGGTCCATCCACCAATCAAATCAAAGCAAGATGACAAAGATTCGTTGCTT GCACAAATACGAAACAAGTCCGTCAATCTAAAGCCGGCAGTAACAACACGACCCAGCATC CAGACTGGTCCTAGAACAGACTTAAGGGTAGCTGCAATCTTAGAGAAAGCAAATACAATA CGCATGGCAATGGCTGGAAGCGACGAGGATGAAGATTCAGATAGTTGGAGTGATTCTTGA

Peptide Sequence

PEP ID	AT2G38440.1
PEP Infomation	\| SCAR homolog 2 \| Chr2:16095550-16100851 FORWARD LENGTH=1399 \| 201606
Sequence	MPLTRYQSRNEYGLADPDLYQAADKDDPEALLEGVAMAGLVGILRQLGDLAEFAAEMFHD LHEEVMATASRSHGLMARVQQLEAEFPSIEKALLCQTDHSPFFSNKGVEWHPNLQLEQSV VTSGDLPRCVMDSYEECRGPPRLFLLDKFDISGAGACLKRYTDPSFVRLETSSYEESWDD IQREKKSQKAKRRASQWRNGGTPENALSSHAKLHELFLEEHLEAHHSDPARVVKLKTRKL DGCSLISKSGESYMEKFVQTRVDSKISYEIITQNPGLLTWNMDSARDVVTDIPEISMVGA MDKSHGGSRAEVSFPSEQENVANVNMNGGFIEKDIETVPESTYNEVRGTTITQDSQTVLN GKPGFFQQRSYSEDLTSEADNYVDAPATMESETETDDECRPKSRSDTLKDGNHHIYSDAV EERMEDPPQFSFSHSNGNTPVSENGRSSFGKKSTSYSYSDTASISIDDQSDGEKLSGCLP STSSFKSELVDSMSHVTPEANKVSHDLNVQESVSSSNVDGQTSLSSNGTCSSPRPVSQND QSCSLTVQSLASEVVETSPELVRLDLMKGGNDGRKVDPFDSSKSCASFDAKNSDLPSETS SISSTSEGSRCDSTIEKNCMVASNLVNSGTSPQAFVDSQTGKQLPIADTDFETNSIVACS EVLANSGSDPEERDGRCLTGKLVPCSAGVGMEVSPDTPSKVCGPSSADGIHLKDTLDDET DCVSVTNVVVDVDSKNSVADVGSQSSVADIDSQSSVAEISDEHSCAFGNTADVSVSESHE DTLENGMSVPSDFNSGVEKLAGDASPTCSKCDDHISHEGFHDLSGLDNATTDIVPNVELD VSDNDNDTSSGGVNHAVSLSSTRGKGSLPWISTNTYQSSSDAGEIFHDTVVESDGTLLED NNPESEIKMHKSPLEVSSEGLSTEPDNKDVESIESTSPKPSLDQRNRDTETKSPGESILD DNCIDSTQVYNLNLLESEAIDQAVREQTSYASHEVADEELLQSNVFRGLEFEPQSAGLEF APQSAGIELNRPKQELNLDPTFPSFGFIPETIPPNPEDMPPLPPMQWLIGKVPHSFPTFM GESVETSSSALSAAPPIGSSLNVQIGSPPSELSVSLGSDESERLPGGFVHNASEKPLQSS IQFPTMSTDLNSQYDSSELPTIPYQECIEDFGSEENNLLADHAAQNHELVYSQASSLQLP QVKHEDFKDDADVHESQSSSDDHHCPETKSLTPTQSTKVEDKGHSVPDASNAETAESSNT SVQKINPVSVGDAMWPVSCFSVAPTLDTYKTEVVPTVRLPRPRSPLVDAVAAHDRRKMKK VSEMVHPPIKSKQDDKDSLLAQIRNKSVNLKPAVTTRPSIQTGPRTDLRVAAILEKANTI RMAMAGSDEDEDSDSWSDS

Transcript Sequence

Transcript ID	AT2G38440.1
Transcript Infomation	\| SCAR homolog 2 \| Chr2:16095235-16101221 FORWARD LENGTH=4885 \| 201606
Sequence	CTAAAAGTAACAATTTTTTAAGTATTTCTGGCTATCGAAAAATAGAAAAAGAAATGTTTT CTTAAAAAGTCTTTTAGCGTTGAGGTTCTCAGACTCTCTCTCTCTCTCTTTGCCCCTACC TATATCCGCCGTCTTGAATCCACAGAAAGTCCGTTTTAGTTTCCAGCTAAGTGATGTCGT CACATATCTAATGGTGGTCGGTCACTACTTAAATGAAGACAGAGAAGCTTTTCTAGTCTT CTTCTTTCTAAAGTTCTTACCTTTAGAATTTGAACAAAAGTATCAGCGAGCTGATCAGAC AGAGAAGCTCAAACAATGCCGTTGACGAGGTACCAATCTCGTAACGAGTATGGATTAGCA GATCCGGATCTGTATCAAGCTGCTGATAAAGATGACCCTGAAGCTCTGCTTGAAGGAGTC GCTATGGCTGGTCTCGTTGGCATTTTGCGTCAACTCGGTGATCTCGCTGAGTTTGCTGCT GAGATGTTTCATGACTTGCACGAAGAAGTAATGGCTACTGCTTCTAGAAGCCATGGTTTA ATGGCTCGTGTGCAACAGTTGGAAGCAGAGTTTCCTTCTATAGAGAAGGCATTACTGTGT CAAACCGATCATTCGCCGTTTTTCTCTAACAAAGGTGTGGAATGGCATCCGAATCTACAA TTGGAACAGAGTGTGGTTACAAGTGGTGACTTACCTCGTTGTGTGATGGATTCTTATGAG GAATGTCGAGGTCCTCCAAGGCTATTTCTTCTGGACAAGTTTGATATTTCCGGAGCTGGG GCTTGTTTGAAACGCTACACCGATCCATCGTTTGTTAGGCTTGAAACGTCTTCATATGAA GAATCATGGGATGATATTCAGAGAGAGAAAAAATCACAGAAAGCAAAGAGGAGAGCATCT CAGTGGAGGAATGGAGGGACACCTGAAAATGCATTATCATCACATGCCAAATTGCATGAA TTGTTTTTGGAGGAGCATTTAGAGGCTCATCATTCAGATCCAGCGCGCGTTGTGAAGTTG AAAACCAGAAAGCTAGATGGGTGTTCCCTTATTTCAAAATCAGGGGAAAGCTACATGGAG AAATTTGTGCAGACACGTGTAGATAGTAAGATAAGTTATGAAATAATTACCCAAAACCCC GGATTGTTGACATGGAATATGGATAGTGCTAGAGATGTAGTAACCGATATACCTGAAATC AGTATGGTGGGTGCTATGGATAAGTCTCATGGAGGAAGCAGAGCAGAGGTTTCATTCCCA AGTGAGCAGGAAAATGTGGCAAATGTTAACATGAATGGGGGTTTTATTGAAAAAGATATA GAGACAGTGCCTGAATCTACATACAATGAGGTCCGTGGAACAACTATTACACAGGATTCA CAAACGGTTTTGAACGGGAAGCCAGGATTTTTTCAACAGAGGAGTTATTCTGAAGATTTA ACCAGTGAGGCTGACAATTATGTGGACGCACCAGCCACCATGGAGTCGGAAACAGAAACA GACGATGAGTGTAGACCTAAGAGTAGATCAGATACTTTGAAGGATGGGAACCATCATATA TATTCTGATGCGGTTGAAGAGAGAATGGAGGACCCACCTCAGTTTTCATTTTCTCATTCA AATGGAAACACACCAGTTTCGGAAAATGGGCGAAGCTCGTTTGGGAAAAAGAGCACTAGT TATTCTTACTCGGACACTGCAAGCATATCCATTGATGATCAATCTGATGGAGAGAAACTT TCGGGATGTTTACCTTCTACTTCTAGTTTTAAGAGTGAGTTGGTGGATTCTATGTCTCAC GTTACTCCTGAAGCCAACAAAGTGTCTCATGACTTGAATGTTCAGGAATCAGTTAGTAGC AGCAATGTAGATGGCCAGACATCATTAAGTTCGAATGGTACATGTTCAAGTCCAAGGCCA GTCTCTCAGAATGATCAATCATGTTCACTGACAGTTCAATCTTTAGCATCAGAAGTCGTT GAAACTTCTCCAGAACTTGTTAGGCTTGATCTAATGAAGGGAGGCAATGATGGAAGAAAG GTGGATCCATTCGATTCTTCAAAATCTTGTGCATCTTTTGATGCTAAAAACTCTGACTTG CCTTCTGAAACTTCATCAATTAGTTCAACTTCTGAAGGAAGCAGATGTGATAGTACCATT GAGAAGAACTGTATGGTTGCTTCAAATTTAGTAAACTCAGGCACTAGTCCTCAAGCGTTT GTTGATAGTCAAACTGGTAAACAGTTACCTATCGCTGATACTGATTTTGAGACAAACTCT ATAGTTGCTTGTTCTGAAGTTTTAGCAAACTCAGGCAGCGATCCTGAAGAACGTGATGGT CGTTGCCTAACAGGAAAGCTGGTACCTTGCTCAGCTGGGGTGGGGATGGAAGTTTCCCCT GATACGCCCTCTAAAGTCTGTGGTCCAAGTTCAGCTGATGGAATTCACTTAAAAGATACT CTGGATGATGAAACCGATTGTGTTTCAGTGACTAATGTTGTTGTTGACGTTGATTCTAAA AATTCTGTTGCCGACGTTGGTTCTCAAAGTTCAGTTGCTGACATTGATTCTCAAAGTTCA GTTGCTGAGATCTCCGATGAGCATTCATGTGCCTTTGGCAACACGGCTGATGTGTCTGTT TCAGAGTCCCATGAAGACACACTAGAGAATGGAATGTCCGTGCCTTCTGATTTTAACTCG GGAGTAGAGAAATTGGCGGGAGATGCTTCACCTACTTGTAGCAAATGCGATGACCATATC TCTCATGAAGGTTTTCATGACCTTTCAGGGCTGGACAACGCAACCACAGACATTGTCCCG AACGTTGAGCTTGATGTGTCTGATAATGACAATGACACTTCCAGTGGTGGTGTTAATCAT GCCGTTAGTCTGTCATCGACTCGTGGGAAGGGTTCTCTGCCTTGGATTTCGACCAATACT TATCAATCGTCTTCTGATGCTGGAGAGATTTTCCATGATACAGTTGTAGAGTCTGACGGG ACACTACTGGAAGACAATAATCCAGAGTCGGAAATAAAAATGCATAAAAGCCCTCTGGAA GTGTCTTCAGAAGGTCTGAGTACTGAACCAGACAACAAGGACGTAGAAAGTATTGAATCT ACAAGTCCCAAGCCATCTCTGGATCAAAGGAACAGGGACACAGAAACCAAATCTCCTGGT GAGAGCATTCTTGATGATAATTGCATAGATTCCACACAAGTGTATAATCTGAACCTTTTA GAGAGTGAGGCTATCGACCAGGCAGTTAGAGAGCAAACATCTTATGCAAGCCATGAAGTT GCAGATGAGGAATTGCTGCAGTCAAATGTTTTCAGGGGCTTAGAGTTTGAACCACAATCA GCAGGCTTAGAATTTGCACCACAATCTGCAGGTATAGAATTGAACAGACCTAAGCAAGAG TTGAATCTGGATCCTACTTTTCCTAGCTTTGGTTTTATCCCTGAGACTATTCCGCCCAAT CCAGAGGACATGCCACCCCTTCCTCCTATGCAATGGCTTATTGGAAAGGTTCCACATTCT TTTCCTACCTTCATGGGGGAATCAGTCGAAACCAGTAGTTCTGCTTTATCAGCGGCACCA CCCATTGGTTCTAGCTTGAATGTTCAAATTGGGTCTCCACCATCAGAGCTATCTGTATCT TTAGGAAGTGACGAATCAGAACGACTTCCTGGAGGGTTTGTTCACAATGCATCAGAAAAG CCATTGCAATCATCCATTCAGTTCCCAACCATGAGCACTGATTTGAATAGTCAATACGAC AGTTCTGAGCTCCCTACAATACCTTATCAGGAGTGCATAGAGGATTTTGGTTCTGAGGAG AACAATCTTTTGGCTGACCATGCAGCTCAGAACCACGAGCTCGTTTACTCTCAAGCGTCG TCATTGCAGCTGCCTCAGGTTAAACACGAAGATTTCAAGGACGATGCTGATGTGCATGAA TCTCAAAGTTCAAGCGATGATCACCATTGTCCTGAAACCAAATCCCTGACGCCAACTCAA TCAACAAAGGTAGAAGATAAGGGTCATTCGGTTCCTGATGCTTCAAATGCAGAAACTGCA GAATCATCAAACACGTCAGTTCAGAAGATAAATCCTGTTTCAGTGGGAGATGCTATGTGG CCTGTTAGCTGTTTCTCTGTGGCACCTACCTTGGACACATATAAGACAGAAGTGGTCCCT ACGGTTAGGCTTCCTAGGCCAAGAAGTCCGCTTGTCGATGCTGTTGCAGCTCATGACAGA CGCAAGATGAAGAAAGTCTCTGAGATGGTCCATCCACCAATCAAATCAAAGCAAGATGAC AAAGATTCGTTGCTTGCACAAATACGAAACAAGTCCGTCAATCTAAAGCCGGCAGTAACA ACACGACCCAGCATCCAGACTGGTCCTAGAACAGACTTAAGGGTAGCTGCAATCTTAGAG AAAGCAAATACAATACGCATGGCAATGGCTGGAAGCGACGAGGATGAAGATTCAGATAGT TGGAGTGATTCTTGAAATCGATGATCGTTGGCTTTTCCGTGGTGTTCGTTCTTGTATCAT GATGAGTGCGCAAGCACTTGGAGTCAGGTAGGTTATACAATCTCTATTTCAGACATATAA CATTAAATACATACAGTCATTGGTTATTTATATATGTATGTATGTATATTGTGTACTGTT TTATAGGTGTGTGTATGTTGTAATGTAAGTAGATTCCGAAATTTGCAGTAGTTTTACGGA AATTTGTGTGTAGGAATGTTTCGTTCTTTTTTTTAGCTCATAGAACATTCTTTTAGTAGG CTATGTATGTGTATTTGAATACATACATAGATATGTATTGTGTGTTCTCAATCATTTGCA GTGTCCTTTGACTGTATATTTGGTC