Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT2G38420.1
CDS Infomation

| Pentatricopeptide repeat (PPR) superfamily protein | Chr2:16091093-16092454 FORWARD LENGTH=1362 | 201606
Sequence

ATGGCAAGATCTTCGTCATGGCACCGAATGTCAAATTTCATGAGAAAGTATCGAAAAATT
CCTCATTCGTCTTTCAAAACCAAATGGAACGAGAATCTCAAGCAGAAGTATGCCATGGAA
GAGCTAAGAAGCAACCTTCTCACAGATTCAGAGAATGCTTCTGTTATGCGAACCCTCTTA
AGCTCATTCCAACTCCATAACTGTGAGCCCACTCCTCAAGCTTACAGATTCGTTATCAAA
ACCCTAGCTAAATCCTCTCAGCTTGAGAATATTTCATCTGTTCTTTACCACCTTGAAGTC
TCTGAGAAGTTCGATACACCTGAATCCATTTTCAGAGATGTCATCGCTGCTTATGGCTTC
TCCGGTAGAATCGAAGAGGCGATTGAGGTTTTCTTCAAAATCCCTAATTTCAGGTGCGTG
CCTTCTGCTTACACGCTCAATGCTTTGCTCTTAGTTCTTGTGAGAAAAAGACAGAGTCTT
GAATTGGTTCCTGAGATTTTGGTGAAAGCTTGTAGAATGGGTGTTAGGTTAGAGGAATCT
ACTTTCGGGATATTGATCGATGCGCTTTGTAGAATAGGTGAGGTAGATTGTGCTACTGAG
TTAGTGAGATACATGAGTCAGGATAGTGTTATTGTTGATCCAAGATTATACTCTCGGTTA
CTGAGTTCTGTATGTAAACACAAGGATTCGTCATGTTTCGATGTAATTGGATATTTGGAA
GATCTGCGAAAGACTCGGTTTTCGCCAGGTTTGCGGGATTATACAGTTGTGATGAGGTTC
TTGGTGGAAGGAGGAAGGGGGAAAGAAGTTGTAAGTGTACTGAATCAGATGAAATGTGAC
AGAGTAGAGCCTGATCTTGTTTGTTATACAATCGTGTTGCAAGGCGTTATTGCGGATGAG
GATTACCCGAAAGCAGACAAGTTGTTTGATGAGTTGCTCTTGTTAGGTTTGGCTCCTGAT
GTTTATACCTATAATGTGTATATCAATGGGTTATGCAAGCAGAACGATATTGAAGGCGCC
TTAAAGATGATGTCTTCAATGAACAAGCTAGGTTCTGAGCCTAATGTAGTTACATACAAT
ATATTGATCAAGGCATTGGTAAAAGCTGGAGATCTGAGTCGAGCTAAGACTCTATGGAAA
GAGATGGAGACGAATGGAGTTAACCGGAACAGCCACACATTTGATATTATGATTAGTGCA
TATATTGAGGTAGACGAGGTTGTTTGTGCTCATGGTTTATTGGAAGAAGCATTTAACATG
AACGTGTTCGTTAAGAGTTCGAGAATTGAGGAAGTCATTAGCAGATTATGTGAGAAAGGT
TTGATGGATCAAGCAGTCGAACTTTTAGCACACCTGGTTTAA

Peptide Sequence

PEP ID

AT2G38420.1
PEP Infomation

| Pentatricopeptide repeat (PPR) superfamily protein | Chr2:16091093-16092454 FORWARD LENGTH=453 | 201606
Sequence

MARSSSWHRMSNFMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDSENASVMRTLL
SSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGF
SGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEES
TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLE
DLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADE
DYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYN
ILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM
NVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV

Transcript Sequence

Transcript ID

AT2G38420.1
Transcript Infomation

| Pentatricopeptide repeat (PPR) superfamily protein | Chr2:16091030-16092681 FORWARD LENGTH=1652 | 201606
Sequence

ACAGATGTTATATACCGACAAGATCGTATATGACATGTCTTCCAGTTTTATCGAATTGAA
GAAATGGCAAGATCTTCGTCATGGCACCGAATGTCAAATTTCATGAGAAAGTATCGAAAA
ATTCCTCATTCGTCTTTCAAAACCAAATGGAACGAGAATCTCAAGCAGAAGTATGCCATG
GAAGAGCTAAGAAGCAACCTTCTCACAGATTCAGAGAATGCTTCTGTTATGCGAACCCTC
TTAAGCTCATTCCAACTCCATAACTGTGAGCCCACTCCTCAAGCTTACAGATTCGTTATC
AAAACCCTAGCTAAATCCTCTCAGCTTGAGAATATTTCATCTGTTCTTTACCACCTTGAA
GTCTCTGAGAAGTTCGATACACCTGAATCCATTTTCAGAGATGTCATCGCTGCTTATGGC
TTCTCCGGTAGAATCGAAGAGGCGATTGAGGTTTTCTTCAAAATCCCTAATTTCAGGTGC
GTGCCTTCTGCTTACACGCTCAATGCTTTGCTCTTAGTTCTTGTGAGAAAAAGACAGAGT
CTTGAATTGGTTCCTGAGATTTTGGTGAAAGCTTGTAGAATGGGTGTTAGGTTAGAGGAA
TCTACTTTCGGGATATTGATCGATGCGCTTTGTAGAATAGGTGAGGTAGATTGTGCTACT
GAGTTAGTGAGATACATGAGTCAGGATAGTGTTATTGTTGATCCAAGATTATACTCTCGG
TTACTGAGTTCTGTATGTAAACACAAGGATTCGTCATGTTTCGATGTAATTGGATATTTG
GAAGATCTGCGAAAGACTCGGTTTTCGCCAGGTTTGCGGGATTATACAGTTGTGATGAGG
TTCTTGGTGGAAGGAGGAAGGGGGAAAGAAGTTGTAAGTGTACTGAATCAGATGAAATGT
GACAGAGTAGAGCCTGATCTTGTTTGTTATACAATCGTGTTGCAAGGCGTTATTGCGGAT
GAGGATTACCCGAAAGCAGACAAGTTGTTTGATGAGTTGCTCTTGTTAGGTTTGGCTCCT
GATGTTTATACCTATAATGTGTATATCAATGGGTTATGCAAGCAGAACGATATTGAAGGC
GCCTTAAAGATGATGTCTTCAATGAACAAGCTAGGTTCTGAGCCTAATGTAGTTACATAC
AATATATTGATCAAGGCATTGGTAAAAGCTGGAGATCTGAGTCGAGCTAAGACTCTATGG
AAAGAGATGGAGACGAATGGAGTTAACCGGAACAGCCACACATTTGATATTATGATTAGT
GCATATATTGAGGTAGACGAGGTTGTTTGTGCTCATGGTTTATTGGAAGAAGCATTTAAC
ATGAACGTGTTCGTTAAGAGTTCGAGAATTGAGGAAGTCATTAGCAGATTATGTGAGAAA
GGTTTGATGGATCAAGCAGTCGAACTTTTAGCACACCTGGTTTAAGCAATGTGGAGCATC
TCTAAATAGTTGTAAAATTGATGTATTTGGTCTTATTGATGATTGTTAGAACTTAATAGA
AGAGTGATTAGTTTGCTTGGCAAGACTTTCGAAGTAGCTTGGTTCTGTTTGTTCAACGTT
AATTGCACCAATTGTTCCACTGCTATCACTGAAACTTACCTTTAACCTTAATGTATACAA
AGTTGACACATCCATCAAACTTGACTGTGATA