Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT2G25410.1
CDS Infomation

| RING/U-box superfamily protein | Chr2:10814470-10815917 FORWARD LENGTH=1134 | 201606
Sequence

ATGACCTCAAAACTACTTCCTCTCCTCCTCAATCTCATCTTCCTCTTCTTCTTTCCCCTT
CTAAACGCATCCGAACAAAAACCTTGCTACAGTTTCTCATGTAGTCAAGAGAGCGTCGTT
GCTCGTTTCCCTTTCTCCCTATTCTCCTATCAACCTGAGTCATGCGGCTACTCAGGATTC
AACCTCATATGCAAAGATGATGCCAATACTACCTTAAAGCTTCCTAAGTCTGAACCCTTT
CTTGTTAAGGAGATCGACTATGAAACACAGCGTATTCGCCTCAACGACCCTGAGAATTGT
TTGGCCAGACGACTTCTTAACTTTGACCCTTCAGGATCTCCTTTTTCTTTTCTTCGCTCT
CGTAACTACACGTTCTTGATCTGTCCTAAGGAAGCGAACATCACTGCATCCTTCAGAGCT
ATCGATTGCCTTGGTAATACCACTTCCTCCTTCTTTGTTGTGCAGTTTGAGAATCTCGGT
TCGATGCCATCTTCTTGTCACATCTTTAAGATATTACCTCTTCCATTTTCTTGGTTTGTC
GCCTACACGACATACCCTGATGGCCAAAACAGTCGAGACATGTGGCTCAAATGGGACTCG
CCGGATTGTAGAGATTGTGAGAGGAGAACTAATTCAAGATGTGGATTCAAAAACAATACT
TCCCATCAAGTCGAATGCTTCAGTTCTGTTAACCCTGGACTTCACAACACAGGCTTACAA
GTACTAAAGATAATGTGCCTCTCCCTAGTCGGACCACTCACCGCCTTGACTTTTTGTGTC
GGTCTTGTCATGTGCAGTTCCGAGAGAGTCTCTTCACAGATACAACAAGCAGTGGTTGCA
CGCCTTTCTGGATCCGTAACGTCGCAGCCAAGCAACGAAGTCGCAAGGATAGGTCTCGAT
GAGTCTACAATTGAGTCATACAAGAAAGTTGAGCTAGGGGAGAGTAGGAGACTCCCGACC
GGGTCAAATGATGTTGTTTGTCCCATTTGTTTGTCGGAATATGCAACCAAAGAAACTGTT
AGGTGTTTACCTGAATGTGAACATTGCTTCCATACTGAATGTATTGATGCGTGGCTCAAG
TTGCATAGTTCCTGCCCGGTTTGTCGGAGTAATCCATCTCCTTTGCGCGATTGA

Peptide Sequence

PEP ID

AT2G25410.1
PEP Infomation

| RING/U-box superfamily protein | Chr2:10814470-10815917 FORWARD LENGTH=377 | 201606
Sequence

MTSKLLPLLLNLIFLFFFPLLNASEQKPCYSFSCSQESVVARFPFSLFSYQPESCGYSGF
NLICKDDANTTLKLPKSEPFLVKEIDYETQRIRLNDPENCLARRLLNFDPSGSPFSFLRS
RNYTFLICPKEANITASFRAIDCLGNTTSSFFVVQFENLGSMPSSCHIFKILPLPFSWFV
AYTTYPDGQNSRDMWLKWDSPDCRDCERRTNSRCGFKNNTSHQVECFSSVNPGLHNTGLQ
VLKIMCLSLVGPLTALTFCVGLVMCSSERVSSQIQQAVVARLSGSVTSQPSNEVARIGLD
ESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLK
LHSSCPVCRSNPSPLRD

Transcript Sequence

Transcript ID

AT2G25410.1
Transcript Infomation

| RING/U-box superfamily protein | Chr2:10814393-10815994 FORWARD LENGTH=1288 | 201606
Sequence

AAACGTAGGGCCTTCTCCATTAGTGTATAAAGTACTCATTTCTAACTTTTTAATATATCT
TTGTGCCAAACCACATTATGACCTCAAAACTACTTCCTCTCCTCCTCAATCTCATCTTCC
TCTTCTTCTTTCCCCTTCTAAACGCATCCGAACAAAAACCTTGCTACAGTTTCTCATGTA
GTCAAGAGAGCGTCGTTGCTCGTTTCCCTTTCTCCCTATTCTCCTATCAACCTGAGTCAT
GCGGCTACTCAGGATTCAACCTCATATGCAAAGATGATGCCAATACTACCTTAAAGCTTC
CTAAGTCTGAACCCTTTCTTGTTAAGGAGATCGACTATGAAACACAGCGTATTCGCCTCA
ACGACCCTGAGAATTGTTTGGCCAGACGACTTCTTAACTTTGACCCTTCAGGATCTCCTT
TTTCTTTTCTTCGCTCTCGTAACTACACGTTCTTGATCTGTCCTAAGGAAGCGAACATCA
CTGCATCCTTCAGAGCTATCGATTGCCTTGGTAATACCACTTCCTCCTTCTTTGTTGTGC
AGTTTGAGAATCTCGGTTCGATGCCATCTTCTTGTCACATCTTTAAGATATTACCTCTTC
CATTTTCTTGGTTTGTCGCCTACACGACATACCCTGATGGCCAAAACAGTCGAGACATGT
GGCTCAAATGGGACTCGCCGGATTGTAGAGATTGTGAGAGGAGAACTAATTCAAGATGTG
GATTCAAAAACAATACTTCCCATCAAGTCGAATGCTTCAGTTCTGTTAACCCTGGACTTC
ACAACACAGGCTTACAAGTACTAAAGATAATGTGCCTCTCCCTAGTCGGACCACTCACCG
CCTTGACTTTTTGTGTCGGTCTTGTCATGTGCAGTTCCGAGAGAGTCTCTTCACAGATAC
AACAAGCAGTGGTTGCACGCCTTTCTGGATCCGTAACGTCGCAGCCAAGCAACGAAGTCG
CAAGGATAGGTCTCGATGAGTCTACAATTGAGTCATACAAGAAAGTTGAGCTAGGGGAGA
GTAGGAGACTCCCGACCGGGTCAAATGATGTTGTTTGTCCCATTTGTTTGTCGGAATATG
CAACCAAAGAAACTGTTAGGTGTTTACCTGAATGTGAACATTGCTTCCATACTGAATGTA
TTGATGCGTGGCTCAAGTTGCATAGTTCCTGCCCGGTTTGTCGGAGTAATCCATCTCCTT
TGCGCGATTGATTGCTTTGAATAGTCTTGTAGCGTTTGTATGTAATTTGGAATTTGGATC
TCTCCATAAATGCATTACAAACTGTGTC