Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT2G24540.1
CDS Infomation

| Galactose oxidase/kelch repeat superfamily protein | Chr2:10426414-10427532 FORWARD LENGTH=1119 | 201606
Sequence

ATGGCAGAACAAGAAACTACGTCAAACATAAACACCATTAATGATCAAGCAGAAGAAGAA
ACAAGAACAAAATCTCAGCCATTGATTTCAGGTCTACCAAATGATATAGCTGAGCTTTGT
CTTCTTCGTCTTCCTTACCCATACCATGCTCTATATCGCTCTGTTTCATCTTCATGGAAC
AAAACCATCACAAACCCTAGATTCCTCTTCTCCAAGCAATCTCTTTCTATCTCTTCTCCT
TACCTATTTGTCTTCGCTTTCAACAAATCAACGGCTAGGATTCAATGGCAATCCCTTGAC
CTTGCATCTGGCCGTTGGTTTGTTTTACCTCCCATGCCAAACTCTTTCACCAAAATCTCG
TCTCCTCACGCACTCTCATGCGCGTCGATGCCACGTCAGGGGAAGCTTTTTGTACTCGGC
GGCGGAGATGTAAACCGCTCCGCCGTCGTTTACACTGCTCTAACGAATCGTTGGTCGTGT
ATATCTCCGATGATGAGCCCGAGAACGTACTTCGTCTCCGGGAATGTTAACGGTAAAATC
ATGGCCGTTGGTGGGAGTGTGGGCGGAAACGGAGAAGCAACTACGGAAGTTGAATCGTAT
GATCCAGATAATGACACGTGGACGGTTGTGAAGAAGTTGCCGATGGTGTTGGCGAAGTAT
GACTCAGCCGTGATCGGGAAAGAGATGTGTGTAACAGAAGGATGGGCGTGGCCGTTCATG
TTTCCACCGATGGGACAAGTGTACGACTCCGACGAAGGCACGTGGCGAGAGATGAGCGGT
GGGATGAAAGAAGGGTGGACGGGTGTGAGCGTCGTGATCCGCGACAGGCTGTTTGTGATC
TCGGAGCACGGTGATTTTCCGATGAAGGTTTATTGTTCAGATGATGACACGTGGAGGTAC
GTGAGTGGTGAGAAGCTACAGGGGGAGAAGATGCGGCGTCCTTTCGCCGTGACGGGAGCT
GATGATCGTGTGTTTGTGGTGGCCAGTGGGATTAACGTAGCGGAAGGGAGAGTGAGTGAA
GGGCAAAATGGGGATTTTAGTGTTGAGTGGAGGATGGTTTCGTCTCCTAAAAGTTCTATT
CAGTTTTCACCTGCTAGTTGTCATGTGCTATATGTTTGA

Peptide Sequence

PEP ID

AT2G24540.1
PEP Infomation

| Galactose oxidase/kelch repeat superfamily protein | Chr2:10426414-10427532 FORWARD LENGTH=372 | 201606
Sequence

MAEQETTSNINTINDQAEEETRTKSQPLISGLPNDIAELCLLRLPYPYHALYRSVSSSWN
KTITNPRFLFSKQSLSISSPYLFVFAFNKSTARIQWQSLDLASGRWFVLPPMPNSFTKIS
SPHALSCASMPRQGKLFVLGGGDVNRSAVVYTALTNRWSCISPMMSPRTYFVSGNVNGKI
MAVGGSVGGNGEATTEVESYDPDNDTWTVVKKLPMVLAKYDSAVIGKEMCVTEGWAWPFM
FPPMGQVYDSDEGTWREMSGGMKEGWTGVSVVIRDRLFVISEHGDFPMKVYCSDDDTWRY
VSGEKLQGEKMRRPFAVTGADDRVFVVASGINVAEGRVSEGQNGDFSVEWRMVSSPKSSI
QFSPASCHVLYV

Transcript Sequence

Transcript ID

AT2G24540.1
Transcript Infomation

| Galactose oxidase/kelch repeat superfamily protein | Chr2:10426342-10427683 FORWARD LENGTH=1253 | 201606
Sequence

GGATTTGATTTCTTTTCCCAAACTTTAACATTTTATATCTAAAACCATTTCATCTTATGA
ATATCAACAACAATGGCAGAACAAGAAACTACGTCAAACATAAACACCATTAATGATCAA
GCAGAAGAAGAAACAAGAACAAAATCTCAGCCATTGATTTCAGGTCTACCAAATGATATA
GCTGAGCTTTGTCTTCTTCGTCTTCCTTACCCATACCATGCTCTATATCGCTCTGTTTCA
TCTTCATGGAACAAAACCATCACAAACCCTAGATTCCTCTTCTCCAAGCAATCTCTTTCT
ATCTCTTCTCCTTACCTATTTGTCTTCGCTTTCAACAAATCAACGGCTAGGATTCAATGG
CAATCCCTTGACCTTGCATCTGGCCGTTGGTTTGTTTTACCTCCCATGCCAAACTCTTTC
ACCAAAATCTCGTCTCCTCACGCACTCTCATGCGCGTCGATGCCACGTCAGGGGAAGCTT
TTTGTACTCGGCGGCGGAGATGTAAACCGCTCCGCCGTCGTTTACACTGCTCTAACGAAT
CGTTGGTCGTGTATATCTCCGATGATGAGCCCGAGAACGTACTTCGTCTCCGGGAATGTT
AACGGTAAAATCATGGCCGTTGGTGGGAGTGTGGGCGGAAACGGAGAAGCAACTACGGAA
GTTGAATCGTATGATCCAGATAATGACACGTGGACGGTTGTGAAGAAGTTGCCGATGGTG
TTGGCGAAGTATGACTCAGCCGTGATCGGGAAAGAGATGTGTGTAACAGAAGGATGGGCG
TGGCCGTTCATGTTTCCACCGATGGGACAAGTGTACGACTCCGACGAAGGCACGTGGCGA
GAGATGAGCGGTGGGATGAAAGAAGGGTGGACGGGTGTGAGCGTCGTGATCCGCGACAGG
CTGTTTGTGATCTCGGAGCACGGTGATTTTCCGATGAAGGTTTATTGTTCAGATGATGAC
ACGTGGAGGTACGTGAGTGGTGAGAAGCTACAGGGGGAGAAGATGCGGCGTCCTTTCGCC
GTGACGGGAGCTGATGATCGTGTGTTTGTGGTGGCCAGTGGGATTAACGTAGCGGAAGGG
AGAGTGAGTGAAGGGCAAAATGGGGATTTTAGTGTTGAGTGGAGGATGGTTTCGTCTCCT
AAAAGTTCTATTCAGTTTTCACCTGCTAGTTGTCATGTGCTATATGTTTGATGTGTAATT
GTTGTTAGTTTTGAATTTGTAAACTCTTTTCACTAAAACCCTTTTCACTGGCT