Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT2G21860.1
CDS Infomation	\| violaxanthin de-epoxidase-like protein \| Chr2:9318333-9319990 REVERSE LENGTH=1569 \| 201606
Sequence	ATGGCGGCGATTCCTCTCAAAGCTCCTTCTCTTCCTGGAACGAGAGAGTGTTCTCCCTTC CTTAACCGGTTCGTCACTCATCAACCGGTTAATTTCATCCGGAAGTTTCATCCTTCCTTA GATGAAGCATCGTTCTCCAGACGGGGACGAACCACTGTTGTTCGCGTTTTGGAGACGGAG AAGAGTACGAAAATAGAGAAGCCTGAGCCTCCGGTGAAATTGATTGCTCTCGTCGGAAAA GGAGAAGTAAGCCCACTCAAATCCACCTCTTGGGAAGAAGTTATGCTCCACACTGCGAGA AGATTGAAATGGGTTGATGAAGGATATGAAATGCTCGTCTTTGATGATGAAATTGTGAGT TCAAATGATCAGAGAGCTATGAATCTGACACAGGAACTGAATCAGACTGATATCTTGGTT GTCGTTGCTGTTAATAACTCAGAATCTGTGAATTGGATTCAGACTAACAGCAAAAACGTC AAGAACATGATTTGCTTTGAGTCTTCTCCAAATTTGATGAACAGGCTTGGAGGGACTGAT GTTGGAAGTGTGAATAAAGATAAAGAAGTAACAGAGGTTGTGAAGACAGTGGGAGATGCT TGGGAACGTCGTAACTCTGATGATATAAGGTTTTGTTTGCTCGTGATCATCAACGCTTAT ATAAGACCAGTTCCTGTGTTGCAAAACTTGAGGTCCAAAGGTTTTTCGACGCTTAGTTGC ATGGTTAAAAACTGTGGACCTCAGATTTTGAACTGTCTTTTGGATCCGAATTGTCGAAAA GCTCTTCAGTGTTTGAACCAATGTAGTCCTGTGGATCAGGTGTGTAGCTACAGGTGCATT GCTTCTTATGAGGGTCCTTACTTTGAAGCGTTCTCTCTTTGTGTACTACAGAAGCACAAT TGTTTAGAACTGGATGCAAAGATCCCTGAGAAGCCTTATGTGCCTCCCATGACGAGTTTT CGAGGGAAGGAGTTGTGTCATGATACAGCGGAAGACTTGTTTGTTGGGTGGTTAGGGGAA TTGGAATGGAGCTGGCGTGTCGTGGCTGGACAAAACCCGGCTTATGATCAGTTTCCATGT CAGTACCAGCTATTCTACAGAGGGAAAGGGAAGTCGTCGTTTTGGTATGAGCCCGTGTTT CAGGTCAGGACGCTCGAAGAGAAGTTGGTGTGGAGAAGGAGAAGATACTCGGTTAAGCGA GGAAAGATCCCTGCAACGTTTCGTTTCAGTGTTTTGGACAATGGTGTGGTGTCAAATGAG TTTTGGACTATTGTGGATGTATCTGATGATCTAAGTTGGGGACTGTTCCATTACCATGGA GCAGCACGTGTAGCAGGACAGTCTTACACCGGAGCTGTGCTTGTGACACCGGATGGTTCT TACCCGGCAGAGAAGGACAAGGAGAGATTGCAGTCAGCATTGGAGAAATGTGGGATTAAG GAATGGGAACTCTTTGCTGTTGATAATTGTTCTTGTGAAAACCCGCCGCTAGGGATTCCA CAGGGTTCTAGACTTCATTCGAGAATCAGTATCATAGAGGAACCAGACTCGGAAGAAAAA TTCAACTAA

Peptide Sequence

PEP ID	AT2G21860.1
PEP Infomation	\| violaxanthin de-epoxidase-like protein \| Chr2:9318333-9319990 REVERSE LENGTH=522 \| 201606
Sequence	MAAIPLKAPSLPGTRECSPFLNRFVTHQPVNFIRKFHPSLDEASFSRRGRTTVVRVLETE KSTKIEKPEPPVKLIALVGKGEVSPLKSTSWEEVMLHTARRLKWVDEGYEMLVFDDEIVS SNDQRAMNLTQELNQTDILVVVAVNNSESVNWIQTNSKNVKNMICFESSPNLMNRLGGTD VGSVNKDKEVTEVVKTVGDAWERRNSDDIRFCLLVIINAYIRPVPVLQNLRSKGFSTLSC MVKNCGPQILNCLLDPNCRKALQCLNQCSPVDQVCSYRCIASYEGPYFEAFSLCVLQKHN CLELDAKIPEKPYVPPMTSFRGKELCHDTAEDLFVGWLGELEWSWRVVAGQNPAYDQFPC QYQLFYRGKGKSSFWYEPVFQVRTLEEKLVWRRRRYSVKRGKIPATFRFSVLDNGVVSNE FWTIVDVSDDLSWGLFHYHGAARVAGQSYTGAVLVTPDGSYPAEKDKERLQSALEKCGIK EWELFAVDNCSCENPPLGIPQGSRLHSRISIIEEPDSEEKFN

Transcript Sequence

Transcript ID	AT2G21860.1
Transcript Infomation	\| violaxanthin de-epoxidase-like protein \| Chr2:9318122-9320024 REVERSE LENGTH=1814 \| 201606
Sequence	TGTCTGAGAGACGTTAACAACTGTTTTCTTCGCCATGGCGGCGATTCCTCTCAAAGCTCC TTCTCTTCCTGGAACGAGAGAGTGTTCTCCCTTCCTTAACCGGTTCGTCACTCATCAACC GGTTAATTTCATCCGGAAGTTTCATCCTTCCTTAGATGAAGCATCGTTCTCCAGACGGGG ACGAACCACTGTTGTTCGCGTTTTGGAGACGGAGAAGAGTACGAAAATAGAGAAGCCTGA GCCTCCGGTGAAATTGATTGCTCTCGTCGGAAAAGGAGAAGTAAGCCCACTCAAATCCAC CTCTTGGGAAGAAGTTATGCTCCACACTGCGAGAAGATTGAAATGGGTTGATGAAGGATA TGAAATGCTCGTCTTTGATGATGAAATTGTGAGTTCAAATGATCAGAGAGCTATGAATCT GACACAGGAACTGAATCAGACTGATATCTTGGTTGTCGTTGCTGTTAATAACTCAGAATC TGTGAATTGGATTCAGACTAACAGCAAAAACGTCAAGAACATGATTTGCTTTGAGTCTTC TCCAAATTTGATGAACAGGCTTGGAGGGACTGATGTTGGAAGTGTGAATAAAGATAAAGA AGTAACAGAGGTTGTGAAGACAGTGGGAGATGCTTGGGAACGTCGTAACTCTGATGATAT AAGGTTTTGTTTGCTCGTGATCATCAACGCTTATATAAGACCAGTTCCTGTGTTGCAAAA CTTGAGGTCCAAAGGTTTTTCGACGCTTAGTTGCATGGTTAAAAACTGTGGACCTCAGAT TTTGAACTGTCTTTTGGATCCGAATTGTCGAAAAGCTCTTCAGTGTTTGAACCAATGTAG TCCTGTGGATCAGGTGTGTAGCTACAGGTGCATTGCTTCTTATGAGGGTCCTTACTTTGA AGCGTTCTCTCTTTGTGTACTACAGAAGCACAATTGTTTAGAACTGGATGCAAAGATCCC TGAGAAGCCTTATGTGCCTCCCATGACGAGTTTTCGAGGGAAGGAGTTGTGTCATGATAC AGCGGAAGACTTGTTTGTTGGGTGGTTAGGGGAATTGGAATGGAGCTGGCGTGTCGTGGC TGGACAAAACCCGGCTTATGATCAGTTTCCATGTCAGTACCAGCTATTCTACAGAGGGAA AGGGAAGTCGTCGTTTTGGTATGAGCCCGTGTTTCAGGTCAGGACGCTCGAAGAGAAGTT GGTGTGGAGAAGGAGAAGATACTCGGTTAAGCGAGGAAAGATCCCTGCAACGTTTCGTTT CAGTGTTTTGGACAATGGTGTGGTGTCAAATGAGTTTTGGACTATTGTGGATGTATCTGA TGATCTAAGTTGGGGACTGTTCCATTACCATGGAGCAGCACGTGTAGCAGGACAGTCTTA CACCGGAGCTGTGCTTGTGACACCGGATGGTTCTTACCCGGCAGAGAAGGACAAGGAGAG ATTGCAGTCAGCATTGGAGAAATGTGGGATTAAGGAATGGGAACTCTTTGCTGTTGATAA TTGTTCTTGTGAAAACCCGCCGCTAGGGATTCCACAGGGTTCTAGACTTCATTCGAGAAT CAGTATCATAGAGGAACCAGACTCGGAAGAAAAATTCAACTAATTTTGCACTGTGGTAGT CACTGTTTTTCTGTAAATTCATGTTTGTTTAAGAATATCATTGAATCCAATATTGAGTTA AACCCTGAGGAGGCGAAAGATAGGAAGAAATTCGCGTTAAAAATGCAAACGTTTTTTGAA ATGTAGTACACGGTAATAACAACTTGGAGAAAAACAGTGGCACAGGCACTACTAGCATCA AACTTGGCACTCTG