Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT2G19070.1
CDS Infomation	\| spermidine hydroxycinnamoyl transferase \| Chr2:8260185-8261958 REVERSE LENGTH=1356 \| 201606
Sequence	ATGGCTCCCATAACTTTTAGAAAATCTTACACTATAGTACCGGCCGAACCAACGTGGAGC GGTAGGTTTCCCTTAGCCGAGTGGGATCAAGTTGGTACAATTACTCACATTCCCACCCTT TACTTTTACGACAAGCCATCTGAATCTTTCCAAGGCAATGTAGTCGAAATCCTAAAAACC TCGTTGAGCCGTGTGCTAGTCCATTTTTACCCTATGGCTGGCCGTCTCAGATGGCTCCCT CGGGGACGGTTCGAGCTCAATTGTAACGCCGAGGGAGTGGAATTCATTGAAGCGGAATCT GAGGGGAAGCTTTCGGATTTCAAAGACTTCTCTCCTACGCCGGAATTCGAGAATCTTATG CCGCAAGTAAACTATAAAAACCCTATCGAAACGATTCCTCTATTTTTAGCTCAGGTAACC AAATTCAAATGCGGTGGAATAAGCCTTAGCGTCAACGTTTCCCACGCGATCGTAGATGGC CAAAGCGCGCTTCACTTAATATCGGAATGGGGAAGACTCGCGCGCGGTGAACCGTTAGAA ACCGTTCCATTTCTAGACCGGAAAATCCTCTGGGCTGGTGAACCGCTCCCACCGTTTGTG TCGCCCCCAAAGTTCGACCACAAAGAGTTTGATCAGCCACCGTTTTTGATCGGAGAAACG GACAATGTAGAAGAGAGAAAGAAGAAAACGATTGTGGTGATGCTACCACTGAGCACATCT CAGCTGCAGAAGCTACGAAGTAAAGCCAACGGAAGCAAACACTCTGACCCGGCGAAAGGG TTTACAAGGTACGAGACCGTCACCGGACACGTGTGGAGGTGCGCGTGTAAAGCACGTGGC CACTCTCCGGAGCAACCAACGGCTCTAGGAATCTGTATAGATACTCGTAGTCGGATGGAG CCACCTCTGCCACGCGGCTACTTCGGCAATGCTACTCTTGACGTGGTCGCAGCAAGCACC TCAGGTGAACTGATATCGAATGAATTGGGTTTCGCGGCGAGTTTAATCAGTAAAGCCATA AAGAATGTAACAAACGAATACGTGATGATTGGGATAGAGTATCTTAAGAACCAAAAAGAT CTGAAGAAGTTTCAAGATCTACATGCCTTGGGAAGCACGGAAGGTCCATTCTACGGAAAC CCAAATCTTGGAGTGGTGAGCTGGTTAACTTTGCCAATGTACGGCCTTGATTTCGGATGG GGCAAAGAGTTCTACACGGGACCAGGCACGCATGACTTTGACGGCGACTCGCTGATCTTG CCGGATCAAAACGAAGATGGCTCGGTGATTCTCGCGACGTGTCTACAGGTGGCTCACATG GAGGCCTTCAAGAAACACTTTTATGAAGATATCTAG

Peptide Sequence

PEP ID	AT2G19070.1
PEP Infomation	\| spermidine hydroxycinnamoyl transferase \| Chr2:8260185-8261958 REVERSE LENGTH=451 \| 201606
Sequence	MAPITFRKSYTIVPAEPTWSGRFPLAEWDQVGTITHIPTLYFYDKPSESFQGNVVEILKT SLSRVLVHFYPMAGRLRWLPRGRFELNCNAEGVEFIEAESEGKLSDFKDFSPTPEFENLM PQVNYKNPIETIPLFLAQVTKFKCGGISLSVNVSHAIVDGQSALHLISEWGRLARGEPLE TVPFLDRKILWAGEPLPPFVSPPKFDHKEFDQPPFLIGETDNVEERKKKTIVVMLPLSTS QLQKLRSKANGSKHSDPAKGFTRYETVTGHVWRCACKARGHSPEQPTALGICIDTRSRME PPLPRGYFGNATLDVVAASTSGELISNELGFAASLISKAIKNVTNEYVMIGIEYLKNQKD LKKFQDLHALGSTEGPFYGNPNLGVVSWLTLPMYGLDFGWGKEFYTGPGTHDFDGDSLIL PDQNEDGSVILATCLQVAHMEAFKKHFYEDI

Transcript Sequence

Transcript ID	AT2G19070.1
Transcript Infomation	\| spermidine hydroxycinnamoyl transferase \| Chr2:8260038-8261985 REVERSE LENGTH=1530 \| 201606
Sequence	AAGAGAAAAAGAAAGGGGGTTTGTGTTATGGCTCCCATAACTTTTAGAAAATCTTACACT ATAGTACCGGCCGAACCAACGTGGAGCGGTAGGTTTCCCTTAGCCGAGTGGGATCAAGTT GGTACAATTACTCACATTCCCACCCTTTACTTTTACGACAAGCCATCTGAATCTTTCCAA GGCAATGTAGTCGAAATCCTAAAAACCTCGTTGAGCCGTGTGCTAGTCCATTTTTACCCT ATGGCTGGCCGTCTCAGATGGCTCCCTCGGGGACGGTTCGAGCTCAATTGTAACGCCGAG GGAGTGGAATTCATTGAAGCGGAATCTGAGGGGAAGCTTTCGGATTTCAAAGACTTCTCT CCTACGCCGGAATTCGAGAATCTTATGCCGCAAGTAAACTATAAAAACCCTATCGAAACG ATTCCTCTATTTTTAGCTCAGGTAACCAAATTCAAATGCGGTGGAATAAGCCTTAGCGTC AACGTTTCCCACGCGATCGTAGATGGCCAAAGCGCGCTTCACTTAATATCGGAATGGGGA AGACTCGCGCGCGGTGAACCGTTAGAAACCGTTCCATTTCTAGACCGGAAAATCCTCTGG GCTGGTGAACCGCTCCCACCGTTTGTGTCGCCCCCAAAGTTCGACCACAAAGAGTTTGAT CAGCCACCGTTTTTGATCGGAGAAACGGACAATGTAGAAGAGAGAAAGAAGAAAACGATT GTGGTGATGCTACCACTGAGCACATCTCAGCTGCAGAAGCTACGAAGTAAAGCCAACGGA AGCAAACACTCTGACCCGGCGAAAGGGTTTACAAGGTACGAGACCGTCACCGGACACGTG TGGAGGTGCGCGTGTAAAGCACGTGGCCACTCTCCGGAGCAACCAACGGCTCTAGGAATC TGTATAGATACTCGTAGTCGGATGGAGCCACCTCTGCCACGCGGCTACTTCGGCAATGCT ACTCTTGACGTGGTCGCAGCAAGCACCTCAGGTGAACTGATATCGAATGAATTGGGTTTC GCGGCGAGTTTAATCAGTAAAGCCATAAAGAATGTAACAAACGAATACGTGATGATTGGG ATAGAGTATCTTAAGAACCAAAAAGATCTGAAGAAGTTTCAAGATCTACATGCCTTGGGA AGCACGGAAGGTCCATTCTACGGAAACCCAAATCTTGGAGTGGTGAGCTGGTTAACTTTG CCAATGTACGGCCTTGATTTCGGATGGGGCAAAGAGTTCTACACGGGACCAGGCACGCAT GACTTTGACGGCGACTCGCTGATCTTGCCGGATCAAAACGAAGATGGCTCGGTGATTCTC GCGACGTGTCTACAGGTGGCTCACATGGAGGCCTTCAAGAAACACTTTTATGAAGATATC TAGGCCTTATATGTTTTTTATATACATGACGTATACAAATATTTATGCACTTTCATTTGA ATTCTACTTATATTGTAGTGATTATTGAATTGTAATAACAGATTCTAAACTATATATTAT TGTTCTTACTACAATGGAATTAACATTTAA