Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT2G18880.1
CDS Infomation	\| vernalization5/VIN3-like protein \| Chr2:8176386-8178788 FORWARD LENGTH=1590 \| 201606
Sequence	ATGGCTTCTTTTCATAAAGGAGCTGCAGGTGACTCAATGGGAAGCAGTAAAATGAGTTTT GATCAAAGAAGACAACTTGTCTTGAAGCTGTCGAAAGAATCCGAGAGAGAATTTAAAGAA GTCTTGAAGGACTGGAGCTGCAACGAGATTCGAGAGCTCTTACGTGCAGAATCAAAGAAA GATATAAAGTACACCGGTTTGACGAAAGATGAGATCATCACAAGGCTTTTCAACATTGTA TCAAAGAAAAACACTAGAGATCATGAGGTAGAAGAGATAATTCCATCACCAAAAAGACAG AAAAGAGATCTTGTGACTCCATTAGCTAAAGCTAAAGGCAAGGGTAAAATGTATTGTCAG AACTTGGCTTGCCAGAATAAACTAAGAGAGGAAGCCACTTTTTGCAAAAGGTGCTCTTGT TGTATCTGCTTTAAGTATGATGACAATAAAGATCCTAGTCTCTGGTTAACCTGCAATTCA GATTCTCAATTCGACGGTGAATCTTGTGGATTATCTTGCCATTTAAACTGCGCTTTCGAC AGTGAGAAATCGGGTCTGAAAGAGGATACGCCGAGTAGTGATATTGATGGATGCTTCAAC TGTGTTTCCTGTGGGAAAACAAATAGCAAAATAGAATGTTTGAAGAAGCAACTGATCATT GCAAATGAAGAAAGAAGAGTAGGCGTGTTTTGTTACCGCATTCTCTTGGCTCATAAGCTT CTCAAGGGCACAAAGAAGTACATAATAGTATCTGAAGAGGTGGAGAAAGCTGTGATGCAT CTGAAAAATGAATTTGGTGTTCCCATTTCTTGTCTTCCATCGAAGATGAGTAGAGGGCTC GTTAACAGACTTTGCTGCGCTGAGAAAGTCAAGAAACATTGCTCTTCTGCTTTGAAAGAG CTTGATGGTCTTCCACTGCCTTCTACTATCCAAGGATCAATGAAGATCAGAATTGAGTCT GTACTTGCAACTTCTGTGACTTTCGATATTGAAGCCGAAGAATCTTTCTCATGGGGAGAT ACCAATCATTACCGCATGGTGTATCGTAAGGTCTCAGAGAAACATTCCTCAAAGGATTTG ACTCGTGAGTTGTTCAGTACATCAAGTCACCAAAGGTTTACAGTCATGGAACTTACTCCA GCTACAGAGTATTGGTTCAAAATAGTTTCCTTTAGCGGCGTCGAAGAATTGAGCGTAGAT GAATTCATAGTCTCTACAAAAACCCTCCAAGACGAAGAAGTGGCAGCAGTTTTATTGAAT ATGTCAAACTGCAACAATGCCAACAAAATGGAGAAATCAGGAAGCTGCAGTTTTGGGTTT GAGGAATGTGTGAATCTCATTAGGCAGCTAGAGTGCTCAGGTCAGGTCAAGAGTGATTTC AGAAAGAAGTTTCTGACGTGGTATTGCTTAAAGGCAACGGATAAGGAGAAACATGTTGTA GAGATCTTTGTGGATACTTTCAAAGACGATAAAGAAGCTTTGGCTAAGCAGCTCATTGAT ACATTCTCTGATTGCATAACAAGGAAGCATCCTGAGATTGGTGGTGGCAGTGAGTCTGCT GGAGTGTCTTTGATTCTGCTGCAGGATTGA

Peptide Sequence

PEP ID	AT2G18880.1
PEP Infomation	\| vernalization5/VIN3-like protein \| Chr2:8176386-8178788 FORWARD LENGTH=529 \| 201606
Sequence	MASFHKGAAGDSMGSSKMSFDQRRQLVLKLSKESEREFKEVLKDWSCNEIRELLRAESKK DIKYTGLTKDEIITRLFNIVSKKNTRDHEVEEIIPSPKRQKRDLVTPLAKAKGKGKMYCQ NLACQNKLREEATFCKRCSCCICFKYDDNKDPSLWLTCNSDSQFDGESCGLSCHLNCAFD SEKSGLKEDTPSSDIDGCFNCVSCGKTNSKIECLKKQLIIANEERRVGVFCYRILLAHKL LKGTKKYIIVSEEVEKAVMHLKNEFGVPISCLPSKMSRGLVNRLCCAEKVKKHCSSALKE LDGLPLPSTIQGSMKIRIESVLATSVTFDIEAEESFSWGDTNHYRMVYRKVSEKHSSKDL TRELFSTSSHQRFTVMELTPATEYWFKIVSFSGVEELSVDEFIVSTKTLQDEEVAAVLLN MSNCNNANKMEKSGSCSFGFEECVNLIRQLECSGQVKSDFRKKFLTWYCLKATDKEKHVV EIFVDTFKDDKEALAKQLIDTFSDCITRKHPEIGGGSESAGVSLILLQD

Transcript Sequence

Transcript ID	AT2G18880.1
Transcript Infomation	\| vernalization5/VIN3-like protein \| Chr2:8172189-8178995 FORWARD LENGTH=2108 \| 201606
Sequence	CTGATGCAGGAATCTATAATGTCCAAACATTTACCTAAGACAGATCGGAGAAGGAACTCA GCTCCTCCACATTCTTCTGTCAACGGACTGCGTGGCTGACTAATTAGATTGTGAATCTCA GATAACTTATTCGACCCAAGATCAATTCAGTACCCAAATATGGAAGGTGGAAGGAGATCT TCTGCGGACCACACCATTTTTTCCGCTCATCAACTTCAAGGGGATAATTTTACACCATTT CAATCTCATAAGGTTTTCAAGATTCCGAGTATATACTTTGGGTTTGATCAAGCTCTCTAC TACTTTCTTTCATGGCTTCTTTTCATAAAGGAGCTGCAGGTGACTCAATGGGAAGCAGTA AAATGAGTTTTGATCAAAGAAGACAACTTGTCTTGAAGCTGTCGAAAGAATCCGAGAGAG AATTTAAAGAAGTCTTGAAGGACTGGAGCTGCAACGAGATTCGAGAGCTCTTACGTGCAG AATCAAAGAAAGATATAAAGTACACCGGTTTGACGAAAGATGAGATCATCACAAGGCTTT TCAACATTGTATCAAAGAAAAACACTAGAGATCATGAGGTAGAAGAGATAATTCCATCAC CAAAAAGACAGAAAAGAGATCTTGTGACTCCATTAGCTAAAGCTAAAGGCAAGGGTAAAA TGTATTGTCAGAACTTGGCTTGCCAGAATAAACTAAGAGAGGAAGCCACTTTTTGCAAAA GGTGCTCTTGTTGTATCTGCTTTAAGTATGATGACAATAAAGATCCTAGTCTCTGGTTAA CCTGCAATTCAGATTCTCAATTCGACGGTGAATCTTGTGGATTATCTTGCCATTTAAACT GCGCTTTCGACAGTGAGAAATCGGGTCTGAAAGAGGATACGCCGAGTAGTGATATTGATG GATGCTTCAACTGTGTTTCCTGTGGGAAAACAAATAGCAAAATAGAATGTTTGAAGAAGC AACTGATCATTGCAAATGAAGAAAGAAGAGTAGGCGTGTTTTGTTACCGCATTCTCTTGG CTCATAAGCTTCTCAAGGGCACAAAGAAGTACATAATAGTATCTGAAGAGGTGGAGAAAG CTGTGATGCATCTGAAAAATGAATTTGGTGTTCCCATTTCTTGTCTTCCATCGAAGATGA GTAGAGGGCTCGTTAACAGACTTTGCTGCGCTGAGAAAGTCAAGAAACATTGCTCTTCTG CTTTGAAAGAGCTTGATGGTCTTCCACTGCCTTCTACTATCCAAGGATCAATGAAGATCA GAATTGAGTCTGTACTTGCAACTTCTGTGACTTTCGATATTGAAGCCGAAGAATCTTTCT CATGGGGAGATACCAATCATTACCGCATGGTGTATCGTAAGGTCTCAGAGAAACATTCCT CAAAGGATTTGACTCGTGAGTTGTTCAGTACATCAAGTCACCAAAGGTTTACAGTCATGG AACTTACTCCAGCTACAGAGTATTGGTTCAAAATAGTTTCCTTTAGCGGCGTCGAAGAAT TGAGCGTAGATGAATTCATAGTCTCTACAAAAACCCTCCAAGACGAAGAAGTGGCAGCAG TTTTATTGAATATGTCAAACTGCAACAATGCCAACAAAATGGAGAAATCAGGAAGCTGCA GTTTTGGGTTTGAGGAATGTGTGAATCTCATTAGGCAGCTAGAGTGCTCAGGTCAGGTCA AGAGTGATTTCAGAAAGAAGTTTCTGACGTGGTATTGCTTAAAGGCAACGGATAAGGAGA AACATGTTGTAGAGATCTTTGTGGATACTTTCAAAGACGATAAAGAAGCTTTGGCTAAGC AGCTCATTGATACATTCTCTGATTGCATAACAAGGAAGCATCCTGAGATTGGTGGTGGCA GTGAGTCTGCTGGAGTGTCTTTGATTCTGCTGCAGGATTGATTAGAGGAGATCTGATGAG AAGCATTGACTCAAGTTTTAAGTCTTTTTTTCGTTCTTTCAAAACTCTCTTTTGGACCAT TTAGAAAGGATTCAACTTTGTTTTTCTTCTTCAGTTGGGATTTTTTAGCATTATTGAGAA ACCTCAGAGTTTGATGATTTGTTTTGTTTTTTGGATATTTATGAGTTAGTAACTTTTCTT GAAGCACA