Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT2G17820.1
CDS Infomation	\| histidine kinase 1 \| Chr2:7743133-7748013 REVERSE LENGTH=3624 \| 201606
Sequence	ATGCGAGGAGATAGCTTCTCAATGAGTATTGAGAATCTTCCTGATTCTCCAATGGGTTCG AGGAAGAAGAAGATGCAGATCAGGAAGGTGTTCGATAAAATGACTGAATGGGTTACCCCT TGGAGAAGTAATTTGGAGAGTCCAAGAGAGATGATGATTTTGCGTGGAGATGTTGAACAA GATGAGTTTCAATACGCTAGTAGTCACTGTTTGTCTTCTTACTACAGTGTCTTTGTTGTT CGCCTCGCTATAATGGTTATGTTAGCAATTTTGATAGGGCTTTTAACGGTTCTAACATGG CATTTCACAAGGATTTATACAAAGCAGTCGCTTCAAACATTAGCGTATGGCCTTAGATAC GAGCTTCTTCAGCGTCCAGTCTTACGGATGTGGAGCGTTTTAAACACCACATCAGAGCTA ACAACAGCTCAAGTCAAGTTATCTGAATATGTCATCAAAAAATATGACAAGCCAACAACT CAAGAAGAACTTGTGGAGATGTATCAAGCAATGAAGGATGTGACATGGGCTCTGTTTGCG AGTGCCAAAGCTCTAAATGCCATAACCATAAACTACAGAAATGGATTTGTCCAAGCTTTT CACAGAGATCCAGCAAGTAGCAGCACATTCTACATCTTCTCCGATCTAAAAAACTATTCC ATCAGTGGAACAGGGCCTGAAGATGTAAGTGGGTGGAACAACAAGTCAATACACGGGAAC ATGTCTGCCATTTGGTATCAGCAACAGCTTGATCCAGTAACAGGGGAAAATTTGGGAAAG CCTCTTAAAATTCCACCGGATGATCTGATCAACATCGCAGGAATCTCACAAGTGCCTGAT GGTGAAGCTTCTTGGCATGTGACAGTGAGCAAATACATGGACTCTCCGCTTCTCTCAGCG GCTTTGCCTGTCTTTGATGCATCAAACAAGAGTATTGTGGCTGTTGTGGGGGTGACAACT GCACTTTACAGCGTAGGACAGTTGATGAGAGATCTTGTAGAAGTCCACGGTGGACATATT TATTTGACATCTCAAGAAGGATACTTGCTTGCTACCTCCACAGATGGTCCTCTTTTGAAA AATACATCAAACGGGCCTCAGCTAATGAAAGCCACTGATTCAGAAGAGTGGGTTATAAAG TCAGGAGCTCAGTGGTTAGAGAAAACTTATGGAAGTAAGCGCCCTCACGTTGTTCATGCT GAGAATGTAAAGCTTGGTGACCAACGATATTACATTGATTCATTCTATCTTAATCTCAAG AGACTTCCAATTGTAGGTGTTGTCATTATTCCCAGGAAGTTCATTATGGGAAAAGTGGAT GAAAGGGCCTTCAAGACTTTGATTATTCTGATTTCTGCTTCTGTCTGCATCTTCTTTATT GGATGTGTCTGCATTTTAATACTCACAAATGGAGTTTCAAAGGAGATGAAGCTAAGAGCA GAACTGATAAGGCAACTGGATGCAAGAAGAAGAGCTGAAGCTTCAAGCAACTACAAAAGC CAGTTTTTGGCAAATATGAGTCATGAGTTGAGGACACCAATGGCTGCTGTAATTGGATTA CTAGATATTCTTATATCGGATGATTGTCTTTCAAATGAGCAATACGCAACAGTCACTCAG ATCAGAAAGTGCTCTACAGCTCTCCTTCGGCTTCTCAATAATATACTGGACTTGAGCAAG GTTGAGTCAGGAAAGCTTGTTCTGGAAGAAGCTGAGTTTGATTTGGGGCGAGAACTTGAA GGACTTGTTGACATGTTCTCGGTGCAGTGTATTAATCACAATGTAGAGACAGTTCTAGAC CTCTCTGATGATATGCCAGCATTAGTCAGAGGAGACTCAGCAAGACTTGTTCAAATATTT GCAAATCTTATAAGCAATTCTATAAAGTTTACAACAACGGGTCACATTATTCTTCGTGGA TGGTGCGAGAACATAAATTCTCTACATGATGAGATGAGCGTATCTGTTGACAGAAGGAAA CCATGGGCTCCAATGAAGACAAAACAGGTGCAACACAGAAATCACTTGCAGAAGTCTTGT AAGAACGCGAACAAAATGGTTCTTTGGTTTGAGGTTGATGATACTGGATGTGGAATAGAT CCAAGCAAATGGGACTCTGTTTTTGAGAGCTTTGAGCAAGCTGATCCTTCTACCACTCGG ACGCACGGAGGAACTGGACTTGGACTATGTATTGTGCGAAACTTGGTTAACAAAATGGGT GGAGAAATCAAAGTAGTGCAGAAGAATGGCTTAGGGACTCTTATGAGACTGTACTTGATT TTGAGTACTCCTGACACTGTAGATCAAAACATCCAGCCAGATTTCTCCAAATACGGTCTC GTGGTTATGCTTTCCATGTATGGAAGTACAGCAAGAATGATCACATCAAAGTGGTTGCGA AAACACGGCATTGCAACTGTTGAAGCATCAGACTGGAACGAGCTGACTCAGATCATTAGA GACCTCTTGGAGACGGGAAGCCGTGACAACAGCTTTGATTCACAGCACAATATATCTGAT CCACTGAGAGCAGAGCTTTCAAATATAGTAGAAATCAAGAACCCTGTGTTTGTCATAGTG GTGGATATCGGAGTACTTGATCTCACCACAAATATATGGAAGGAACAGCTTAACTACCTC GACAGATTCTCCAACAAAGCAAAGTTTGCTTGGCTACTGAAGCATGACACCTCCAATACA GTTAAAACAGAACTTAGACGAAAAGGGCATGTCATGATGGTTAACAAACCGTTGTACAAG GCCAAAATGATCCAGATTCTGGAGGCTGTAATAAAAAACCGGAAGAGAGGCTTGTGTAAT GACTTAAGAAACAGAGGAAACGGAAGTGATGAATCCCACGATTGCTTAGAAATTGATCCA ACACAATTCGACACTTGCAGTTCCGATGATTCCTCGGAGACATCTGGCGAGAAACAAGTA GATAAATCTGTTAAACCAAGCACCTTGCACTCTCCAGTGCTTAAGAACTATCTCATCGAT GCCACTACCAGCAATGATGACTCAACATCTGCAAGTATGACTCAAAAGAACCCAGAAGAA GAAGATTGGAAGGATCGGCTGTATTCAGGAATTGCGTTGGATGGAAAGAATCAGAAATCT CTTGAAGGTATAAGGATCTTGCTGGCAGAGGATACACCCGTTCTTCAACGAGTAGCCACC ATAATGCTTGAGAAAATGGGAGCAACTGTAACTGCAGTCTGGGATGGACAACAAGCAGTT GATTCCCTCAACTACAAGTCTATCAATGCTCAAGCTCCAACTGAAGAACACAAATCGTTC GAAGAAGAAACCGCTAACAAAGTTACAACTCGGGAGACTAGTTTACGGAATTCCTCGCCT TATGACTTGATCCTCATGGACTGCCAGATGCCAAAAATGGATGGATATGAGGCAACAAAG GCGATAAGGAGAGCAGAGATTGGCACAGAGCTGCACATTCCAATCGTGGCGTTGACAGCG CATGCAATGTCTTCTGATGAAGCGAAATGCTTGGAGGTTGGAATGGATGCTTATCTCACA AAGCCTATTGATCGAAAGCTTATGGTCTCTACCATTTTGTCACTCACTAAACCATCAGCA TTCCAAACTTCATTGTCCGCTTGA

Peptide Sequence

PEP ID	AT2G17820.1
PEP Infomation	\| histidine kinase 1 \| Chr2:7743133-7748013 REVERSE LENGTH=1207 \| 201606
Sequence	MRGDSFSMSIENLPDSPMGSRKKKMQIRKVFDKMTEWVTPWRSNLESPREMMILRGDVEQ DEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTVLTWHFTRIYTKQSLQTLAYGLRY ELLQRPVLRMWSVLNTTSELTTAQVKLSEYVIKKYDKPTTQEELVEMYQAMKDVTWALFA SAKALNAITINYRNGFVQAFHRDPASSSTFYIFSDLKNYSISGTGPEDVSGWNNKSIHGN MSAIWYQQQLDPVTGENLGKPLKIPPDDLINIAGISQVPDGEASWHVTVSKYMDSPLLSA ALPVFDASNKSIVAVVGVTTALYSVGQLMRDLVEVHGGHIYLTSQEGYLLATSTDGPLLK NTSNGPQLMKATDSEEWVIKSGAQWLEKTYGSKRPHVVHAENVKLGDQRYYIDSFYLNLK RLPIVGVVIIPRKFIMGKVDERAFKTLIILISASVCIFFIGCVCILILTNGVSKEMKLRA ELIRQLDARRRAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLSNEQYATVTQ IRKCSTALLRLLNNILDLSKVESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVETVLD LSDDMPALVRGDSARLVQIFANLISNSIKFTTTGHIILRGWCENINSLHDEMSVSVDRRK PWAPMKTKQVQHRNHLQKSCKNANKMVLWFEVDDTGCGIDPSKWDSVFESFEQADPSTTR THGGTGLGLCIVRNLVNKMGGEIKVVQKNGLGTLMRLYLILSTPDTVDQNIQPDFSKYGL VVMLSMYGSTARMITSKWLRKHGIATVEASDWNELTQIIRDLLETGSRDNSFDSQHNISD PLRAELSNIVEIKNPVFVIVVDIGVLDLTTNIWKEQLNYLDRFSNKAKFAWLLKHDTSNT VKTELRRKGHVMMVNKPLYKAKMIQILEAVIKNRKRGLCNDLRNRGNGSDESHDCLEIDP TQFDTCSSDDSSETSGEKQVDKSVKPSTLHSPVLKNYLIDATTSNDDSTSASMTQKNPEE EDWKDRLYSGIALDGKNQKSLEGIRILLAEDTPVLQRVATIMLEKMGATVTAVWDGQQAV DSLNYKSINAQAPTEEHKSFEEETANKVTTRETSLRNSSPYDLILMDCQMPKMDGYEATK AIRRAEIGTELHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDRKLMVSTILSLTKPSA FQTSLSA

Transcript Sequence

Transcript ID	AT2G17820.1
Transcript Infomation	\| histidine kinase 1 \| Chr2:7742870-7748502 REVERSE LENGTH=4376 \| 201606
Sequence	CTATATTTGTGTGGACCTGAAGCCAAATGTCTCTCTCCATTGGCCATTTTACCTTCTACA CATTCCCACTGGCCAAATTCGAAGTTCATTCTCTCTCAAATCACTTTGCCCAAATCTTCC TTTTTCCCATATTTGATTTCTTCTTTAAATAAAGCAAAAAAGATTTCATCTTTCTATTTA TTCTCTTTATAAATTGGAACCTACTTTGCTTCTTCTTCAGTCTCCACACTTATCTTATTT TTGCCAGTCTTCTCTGTGGATGAAGCAGAGTTTTTAGTCAATCAAAAGTTTGAAGCTTTC CTTCATGGGTTTCTGATTTGTCTACTAAAGTTTTGATTTTTTTAATTTGGGTATTAATAA AAAAAGTGGGGAGTGACACAAGAAGCAGTATAGTCATTAGTTTTCCACTAAGCAAAGCAC CCAAAAGTTCACCAACAACAAAGGCCTAATATGTGTCTTTGTTTATGATTTGGGATCATC TGAAACAAGATGCGAGGAGATAGCTTCTCAATGAGTATTGAGAATCTTCCTGATTCTCCA ATGGGTTCGAGGAAGAAGAAGATGCAGATCAGGAAGGTGTTCGATAAAATGACTGAATGG GTTACCCCTTGGAGAAGTAATTTGGAGAGTCCAAGAGAGATGATGATTTTGCGTGGAGAT GTTGAACAAGATGAGTTTCAATACGCTAGTAGTCACTGTTTGTCTTCTTACTACAGTGTC TTTGTTGTTCGCCTCGCTATAATGGTTATGTTAGCAATTTTGATAGGGCTTTTAACGGTT CTAACATGGCATTTCACAAGGATTTATACAAAGCAGTCGCTTCAAACATTAGCGTATGGC CTTAGATACGAGCTTCTTCAGCGTCCAGTCTTACGGATGTGGAGCGTTTTAAACACCACA TCAGAGCTAACAACAGCTCAAGTCAAGTTATCTGAATATGTCATCAAAAAATATGACAAG CCAACAACTCAAGAAGAACTTGTGGAGATGTATCAAGCAATGAAGGATGTGACATGGGCT CTGTTTGCGAGTGCCAAAGCTCTAAATGCCATAACCATAAACTACAGAAATGGATTTGTC CAAGCTTTTCACAGAGATCCAGCAAGTAGCAGCACATTCTACATCTTCTCCGATCTAAAA AACTATTCCATCAGTGGAACAGGGCCTGAAGATGTAAGTGGGTGGAACAACAAGTCAATA CACGGGAACATGTCTGCCATTTGGTATCAGCAACAGCTTGATCCAGTAACAGGGGAAAAT TTGGGAAAGCCTCTTAAAATTCCACCGGATGATCTGATCAACATCGCAGGAATCTCACAA GTGCCTGATGGTGAAGCTTCTTGGCATGTGACAGTGAGCAAATACATGGACTCTCCGCTT CTCTCAGCGGCTTTGCCTGTCTTTGATGCATCAAACAAGAGTATTGTGGCTGTTGTGGGG GTGACAACTGCACTTTACAGCGTAGGACAGTTGATGAGAGATCTTGTAGAAGTCCACGGT GGACATATTTATTTGACATCTCAAGAAGGATACTTGCTTGCTACCTCCACAGATGGTCCT CTTTTGAAAAATACATCAAACGGGCCTCAGCTAATGAAAGCCACTGATTCAGAAGAGTGG GTTATAAAGTCAGGAGCTCAGTGGTTAGAGAAAACTTATGGAAGTAAGCGCCCTCACGTT GTTCATGCTGAGAATGTAAAGCTTGGTGACCAACGATATTACATTGATTCATTCTATCTT AATCTCAAGAGACTTCCAATTGTAGGTGTTGTCATTATTCCCAGGAAGTTCATTATGGGA AAAGTGGATGAAAGGGCCTTCAAGACTTTGATTATTCTGATTTCTGCTTCTGTCTGCATC TTCTTTATTGGATGTGTCTGCATTTTAATACTCACAAATGGAGTTTCAAAGGAGATGAAG CTAAGAGCAGAACTGATAAGGCAACTGGATGCAAGAAGAAGAGCTGAAGCTTCAAGCAAC TACAAAAGCCAGTTTTTGGCAAATATGAGTCATGAGTTGAGGACACCAATGGCTGCTGTA ATTGGATTACTAGATATTCTTATATCGGATGATTGTCTTTCAAATGAGCAATACGCAACA GTCACTCAGATCAGAAAGTGCTCTACAGCTCTCCTTCGGCTTCTCAATAATATACTGGAC TTGAGCAAGGTTGAGTCAGGAAAGCTTGTTCTGGAAGAAGCTGAGTTTGATTTGGGGCGA GAACTTGAAGGACTTGTTGACATGTTCTCGGTGCAGTGTATTAATCACAATGTAGAGACA GTTCTAGACCTCTCTGATGATATGCCAGCATTAGTCAGAGGAGACTCAGCAAGACTTGTT CAAATATTTGCAAATCTTATAAGCAATTCTATAAAGTTTACAACAACGGGTCACATTATT CTTCGTGGATGGTGCGAGAACATAAATTCTCTACATGATGAGATGAGCGTATCTGTTGAC AGAAGGAAACCATGGGCTCCAATGAAGACAAAACAGGTGCAACACAGAAATCACTTGCAG AAGTCTTGTAAGAACGCGAACAAAATGGTTCTTTGGTTTGAGGTTGATGATACTGGATGT GGAATAGATCCAAGCAAATGGGACTCTGTTTTTGAGAGCTTTGAGCAAGCTGATCCTTCT ACCACTCGGACGCACGGAGGAACTGGACTTGGACTATGTATTGTGCGAAACTTGGTTAAC AAAATGGGTGGAGAAATCAAAGTAGTGCAGAAGAATGGCTTAGGGACTCTTATGAGACTG TACTTGATTTTGAGTACTCCTGACACTGTAGATCAAAACATCCAGCCAGATTTCTCCAAA TACGGTCTCGTGGTTATGCTTTCCATGTATGGAAGTACAGCAAGAATGATCACATCAAAG TGGTTGCGAAAACACGGCATTGCAACTGTTGAAGCATCAGACTGGAACGAGCTGACTCAG ATCATTAGAGACCTCTTGGAGACGGGAAGCCGTGACAACAGCTTTGATTCACAGCACAAT ATATCTGATCCACTGAGAGCAGAGCTTTCAAATATAGTAGAAATCAAGAACCCTGTGTTT GTCATAGTGGTGGATATCGGAGTACTTGATCTCACCACAAATATATGGAAGGAACAGCTT AACTACCTCGACAGATTCTCCAACAAAGCAAAGTTTGCTTGGCTACTGAAGCATGACACC TCCAATACAGTTAAAACAGAACTTAGACGAAAAGGGCATGTCATGATGGTTAACAAACCG TTGTACAAGGCCAAAATGATCCAGATTCTGGAGGCTGTAATAAAAAACCGGAAGAGAGGC TTGTGTAATGACTTAAGAAACAGAGGAAACGGAAGTGATGAATCCCACGATTGCTTAGAA ATTGATCCAACACAATTCGACACTTGCAGTTCCGATGATTCCTCGGAGACATCTGGCGAG AAACAAGTAGATAAATCTGTTAAACCAAGCACCTTGCACTCTCCAGTGCTTAAGAACTAT CTCATCGATGCCACTACCAGCAATGATGACTCAACATCTGCAAGTATGACTCAAAAGAAC CCAGAAGAAGAAGATTGGAAGGATCGGCTGTATTCAGGAATTGCGTTGGATGGAAAGAAT CAGAAATCTCTTGAAGGTATAAGGATCTTGCTGGCAGAGGATACACCCGTTCTTCAACGA GTAGCCACCATAATGCTTGAGAAAATGGGAGCAACTGTAACTGCAGTCTGGGATGGACAA CAAGCAGTTGATTCCCTCAACTACAAGTCTATCAATGCTCAAGCTCCAACTGAAGAACAC AAATCGTTCGAAGAAGAAACCGCTAACAAAGTTACAACTCGGGAGACTAGTTTACGGAAT TCCTCGCCTTATGACTTGATCCTCATGGACTGCCAGATGCCAAAAATGGATGGATATGAG GCAACAAAGGCGATAAGGAGAGCAGAGATTGGCACAGAGCTGCACATTCCAATCGTGGCG TTGACAGCGCATGCAATGTCTTCTGATGAAGCGAAATGCTTGGAGGTTGGAATGGATGCT TATCTCACAAAGCCTATTGATCGAAAGCTTATGGTCTCTACCATTTTGTCACTCACTAAA CCATCAGCATTCCAAACTTCATTGTCCGCTTGAAGAATCGGGTAAAAATCTAACAAGTGA ACTTTTTTAGTAGGTTCAGGATCTTGCATTTTGTATATATGTGAATTTGTAGTTGACGAT GAGGTTTTTGGGGGTAAAGAAAATCCTGTTTTTTGGTCATTTTTTGTTTACTGCAATACG AAGAATGTTTTGTACTTAAACATTGTATACTTGTTTTAAAGATGTGAAGAAGTTAAACGA CCAAGACAAAGTTTCGCAGCTTTTGCAGCTTATGTTTCCCTTGCGGAAGCAAAGTT