Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT2G16880.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr2:7312262-7314493 REVERSE LENGTH=2232 \| 201606
Sequence	ATGGCGACTTTAAAGCCACCCGAATCTCAATTACTAAAAACCCTAACATCAATCCTCACA TCAGAGAAAACCCATTTCCTCGAAACCCTAAATCCCTACATTCCTCAAATCACACAGCCT CTCCTTACCTCTCTCCTCTCTTCTCCTTCACTCGCTAAGAAACCAGAAACCCTAGTATCT TTCTTCCAATGGGCTCAAACTTCAATCCCCGAAGCATTTCCATCGGATTCACCTCTTCCA CTTATCTCCGTCGTCCGTTCTCTTCTCTCTCACCACAAATTCGCCGACGCCAAGTCTCTT CTCGTCTCCTATATCCGCACCTCCGATGCATCTCTCTCTCTTTGCAACTCTCTCCTTCAC CCGAATCTTCATCTATCACCTCCACCTTCTAAAGCTCTATTCGACATTGCTCTTAGTGCT TATCTTCATGAGGGAAAGCCTCACGTTGCGTTACAGATCTTCCAGAAGATGATTCGATTA AAGCTTAAGCCAAATCTGCTCACTTGCAATACTCTTCTCATTGGTTTAGTCAGGTACCCT TCTAGCTTCTCTATCTCAAGTGCTAGAGAAGTGTTTGATGATATGGTTAAGATTGGTGTT TCGCTAAATGTGCAAACTTTCAATGTTTTGGTTAATGGGTATTGCTTGGAAGGTAAGCTT GAGGATGCTTTAGGAATGTTAGAGAGGATGGTTAGTGAATTCAAGGTTAATCCTGATAAT GTTACTTACAATACGATTTTGAAAGCAATGTCTAAGAAAGGTCGTTTGAGTGATCTTAAG GAATTGTTGTTGGATATGAAGAAGAATGGATTGGTGCCAAATAGGGTTACTTATAATAAT TTAGTGTATGGTTACTGTAAGTTAGGTTCGTTGAAAGAAGCATTTCAGATTGTGGAGCTG ATGAAGCAAACTAATGTATTACCGGATCTTTGTACCTATAACATTTTGATCAATGGGCTT TGCAATGCGGGGAGTATGAGGGAAGGTCTTGAATTAATGGATGCGATGAAGAGTTTGAAG TTACAGCCCGATGTGGTTACTTACAATACATTGATTGATGGGTGTTTCGAATTGGGGCTT AGTTTGGAGGCTAGGAAGTTGATGGAGCAAATGGAAAATGATGGAGTCAAAGCTAACCAA GTGACTCATAATATCTCTCTTAAGTGGCTTTGTAAGGAAGAGAAAAGGGAAGCGGTTACT AGAAAGGTTAAGGAATTGGTGGACATGCACGGGTTTTCTCCTGATATAGTAACTTATCAT ACTCTGATTAAAGCGTATTTGAAAGTAGGAGATTTGAGTGGTGCCCTTGAGATGATGCGT GAGATGGGGCAAAAAGGGATTAAGATGAATACTATTACCCTTAATACCATTCTTGATGCT CTATGTAAGGAGAGGAAACTTGATGAGGCTCACAATTTGCTGAATAGTGCGCACAAACGA GGATTTATTGTTGACGAGGTTACTTATGGCACATTAATCATGGGATTCTTCAGGGAAGAA AAAGTGGAGAAAGCTTTGGAGATGTGGGATGAGATGAAGAAGGTAAAGATTACTCCTACA GTGAGCACGTTCAACTCTTTAATTGGAGGTCTCTGTCACCATGGAAAAACTGAGCTAGCA ATGGAGAAATTCGATGAGCTTGCTGAGAGTGGTTTGCTTCCTGATGACAGTACTTTCAAT TCAATCATCCTCGGATACTGCAAAGAAGGACGAGTTGAGAAAGCATTCGAGTTTTATAAT GAATCCATCAAACACTCTTTCAAGCCTGATAACTATACATGCAACATTCTCCTCAATGGT CTTTGTAAGGAAGGTATGACAGAAAAGGCTCTCAATTTCTTCAACACGCTAATAGAGGAG AGAGAGGTTGATACAGTTACATACAACACGATGATCTCGGCTTTCTGCAAGGACAAGAAG TTAAAAGAAGCATATGACCTTCTATCAGAAATGGAGGAGAAAGGACTAGAGCCTGATCGG TTTACATACAACAGTTTTATCAGTTTGCTTATGGAAGATGGTAAGCTGAGTGAAACAGAT GAATTGTTAAAGAAATTTTCCGGAAAGTTTGGATCGATGAAGCGGGATTTACAGGTAGAG ACAGAGAAAAATCCAGCAACAAGTGAATCAAAGGAGGAACTTAACACTGAAGCTATTGCT TATTCAGATGTAATAGATGAACTTTGTAGTAGAGGAAGATTAAAGGAGCATTCTAGATCT TACACTAGTTGA

Peptide Sequence

PEP ID	AT2G16880.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr2:7312262-7314493 REVERSE LENGTH=743 \| 201606
Sequence	MATLKPPESQLLKTLTSILTSEKTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVS FFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLH PNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYP SSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDN VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYH TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG LCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR FTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIA YSDVIDELCSRGRLKEHSRSYTS

Transcript Sequence

Transcript ID	AT2G16880.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr2:7312051-7314576 REVERSE LENGTH=2526 \| 201606
Sequence	AAGCTTCATAGCTTTCTTCTTCTTCTTCTTGACGATACAACGAGGATGATCATCAGATAA ATTTCCATTGATTGCCAACAAAAATGGCGACTTTAAAGCCACCCGAATCTCAATTACTAA AAACCCTAACATCAATCCTCACATCAGAGAAAACCCATTTCCTCGAAACCCTAAATCCCT ACATTCCTCAAATCACACAGCCTCTCCTTACCTCTCTCCTCTCTTCTCCTTCACTCGCTA AGAAACCAGAAACCCTAGTATCTTTCTTCCAATGGGCTCAAACTTCAATCCCCGAAGCAT TTCCATCGGATTCACCTCTTCCACTTATCTCCGTCGTCCGTTCTCTTCTCTCTCACCACA AATTCGCCGACGCCAAGTCTCTTCTCGTCTCCTATATCCGCACCTCCGATGCATCTCTCT CTCTTTGCAACTCTCTCCTTCACCCGAATCTTCATCTATCACCTCCACCTTCTAAAGCTC TATTCGACATTGCTCTTAGTGCTTATCTTCATGAGGGAAAGCCTCACGTTGCGTTACAGA TCTTCCAGAAGATGATTCGATTAAAGCTTAAGCCAAATCTGCTCACTTGCAATACTCTTC TCATTGGTTTAGTCAGGTACCCTTCTAGCTTCTCTATCTCAAGTGCTAGAGAAGTGTTTG ATGATATGGTTAAGATTGGTGTTTCGCTAAATGTGCAAACTTTCAATGTTTTGGTTAATG GGTATTGCTTGGAAGGTAAGCTTGAGGATGCTTTAGGAATGTTAGAGAGGATGGTTAGTG AATTCAAGGTTAATCCTGATAATGTTACTTACAATACGATTTTGAAAGCAATGTCTAAGA AAGGTCGTTTGAGTGATCTTAAGGAATTGTTGTTGGATATGAAGAAGAATGGATTGGTGC CAAATAGGGTTACTTATAATAATTTAGTGTATGGTTACTGTAAGTTAGGTTCGTTGAAAG AAGCATTTCAGATTGTGGAGCTGATGAAGCAAACTAATGTATTACCGGATCTTTGTACCT ATAACATTTTGATCAATGGGCTTTGCAATGCGGGGAGTATGAGGGAAGGTCTTGAATTAA TGGATGCGATGAAGAGTTTGAAGTTACAGCCCGATGTGGTTACTTACAATACATTGATTG ATGGGTGTTTCGAATTGGGGCTTAGTTTGGAGGCTAGGAAGTTGATGGAGCAAATGGAAA ATGATGGAGTCAAAGCTAACCAAGTGACTCATAATATCTCTCTTAAGTGGCTTTGTAAGG AAGAGAAAAGGGAAGCGGTTACTAGAAAGGTTAAGGAATTGGTGGACATGCACGGGTTTT CTCCTGATATAGTAACTTATCATACTCTGATTAAAGCGTATTTGAAAGTAGGAGATTTGA GTGGTGCCCTTGAGATGATGCGTGAGATGGGGCAAAAAGGGATTAAGATGAATACTATTA CCCTTAATACCATTCTTGATGCTCTATGTAAGGAGAGGAAACTTGATGAGGCTCACAATT TGCTGAATAGTGCGCACAAACGAGGATTTATTGTTGACGAGGTTACTTATGGCACATTAA TCATGGGATTCTTCAGGGAAGAAAAAGTGGAGAAAGCTTTGGAGATGTGGGATGAGATGA AGAAGGTAAAGATTACTCCTACAGTGAGCACGTTCAACTCTTTAATTGGAGGTCTCTGTC ACCATGGAAAAACTGAGCTAGCAATGGAGAAATTCGATGAGCTTGCTGAGAGTGGTTTGC TTCCTGATGACAGTACTTTCAATTCAATCATCCTCGGATACTGCAAAGAAGGACGAGTTG AGAAAGCATTCGAGTTTTATAATGAATCCATCAAACACTCTTTCAAGCCTGATAACTATA CATGCAACATTCTCCTCAATGGTCTTTGTAAGGAAGGTATGACAGAAAAGGCTCTCAATT TCTTCAACACGCTAATAGAGGAGAGAGAGGTTGATACAGTTACATACAACACGATGATCT CGGCTTTCTGCAAGGACAAGAAGTTAAAAGAAGCATATGACCTTCTATCAGAAATGGAGG AGAAAGGACTAGAGCCTGATCGGTTTACATACAACAGTTTTATCAGTTTGCTTATGGAAG ATGGTAAGCTGAGTGAAACAGATGAATTGTTAAAGAAATTTTCCGGAAAGTTTGGATCGA TGAAGCGGGATTTACAGGTAGAGACAGAGAAAAATCCAGCAACAAGTGAATCAAAGGAGG AACTTAACACTGAAGCTATTGCTTATTCAGATGTAATAGATGAACTTTGTAGTAGAGGAA GATTAAAGGAGCATTCTAGATCTTACACTAGTTGAAGGAGAAACTCCTTTTTTGTGGTTT CTTTTTTGTATTTCGATTTTCTCAAAGCATACTTATTACTTGTTACAGAAAGACATTGTA ATGTAGTTTTTATGTGATGATGATGATTATTATGTTTAGATTGATTAAAAAATTGTGTAT TAACATATCAGGAAACTTTCAAAATGTCGTGTACTCGTACGTATAATATTTTACTGACAA CAAAAG