Plant GARDEN How To ▶︎

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EN

Arabidopsis thaliana

CDS Sequence

CDS ID

AT2G16676.1

CDS Infomation

| Ta11-like non-LTR retrotransposon | Chr2:7230871-7231527 REVERSE LENGTH=657 | 201606

Sequence

ATGCGTGGGATTCCTCTCCTCTATGTTTGTGAAGCCACAGTGACAGAGATAGCTCTTGGT
TTAGGGCAAATTATATCATTGGATTTTCATGATGCTACTACAACCCAAATAGCTTTTATT
AGAGTGAGAATCCGATTTGAGATCACTGATCGTATAAGGTTCTTCCAAAGAATTACCTTT
GATTCTGGTGAGACTGCGCTGATAAGGTTTCAATATGAAAGACTAAGGCGAATTTGCAGT
AGCTGTTTCAGGCTGACTCATCATAGGAATTACTGCCCTTATCGACAACCTGAGCCTCGT
TCTATCATTCGTGGTCCTACCAACAATCTCACTAGGTCTAGAAGAGAAGGAGTGTGTACC
CGGGATGAATATCATCGTTCTTCCCTGAACTCCCAATCACAGATGTCTGAGAACGCCTTT
CCAGCACCTATTGAACCTCCTCCAAGAGTGGCAGCTCCTCCTTTGAATCCTGATGAATTT
AGGGCTGCTTATTTTCCAGAAGGCAGAGCAGGTTCTTTACCAAATATAGGAACATTAAAT
CTTAATCCTCCATCTCGCAGGCAAGAGGCGTCAAGAAACTCTAATGTACAACCGTTTACG
GGTCCTGCATTTGGTGCAAATGTTCCTCGAGTGGTTGAAGTAGGTGAATGTTCATGA

Peptide Sequence

PEP ID

AT2G16676.1

PEP Infomation

| Ta11-like non-LTR retrotransposon | Chr2:7230871-7231527 REVERSE LENGTH=218 | 201606

Sequence

MRGIPLLYVCEATVTEIALGLGQIISLDFHDATTTQIAFIRVRIRFEITDRIRFFQRITF
DSGETALIRFQYERLRRICSSCFRLTHHRNYCPYRQPEPRSIIRGPTNNLTRSRREGVCT
RDEYHRSSLNSQSQMSENAFPAPIEPPPRVAAPPLNPDEFRAAYFPEGRAGSLPNIGTLN
LNPPSRRQEASRNSNVQPFTGPAFGANVPRVVEVGECS

Transcript Sequence

Transcript ID

AT2G16676.1

Transcript Infomation

| Ta11-like non-LTR retrotransposon | Chr2:7230346-7232223 REVERSE LENGTH=1878 | 201606

Sequence

GGTAGAAGGTTGACAGGTGTAAGCAGCGAATGTTTTTTGTATTTGGAGGTCTTATGACTG
GGTTGTTTTTTGTCTTCTTATCTTAAGTAGTTTCCTAAGTGTTGGGTTTTCTCTTTATTA
TGAGTCGGTTAGTTTTGTTTTATATTAATTAATTTAAATTTTCTCGAGGTCTTTTTAGCA
ATTATGTTTTTCCTTTTCTTTTGTTAATTATCTTCTTATAAGGATAGGTTTTTTATTCTC
TTTTGTCTTTAGTCGGGTCTTATGGGTAGACTAGTTTGTGCTATATATACGAGTTCTGTC
TTAGGTTTATAAGTCGAGTCTCATCTCATCTTCTCTTGTGCTTCTCCTTTCCTGGTATTA
TGGCTGATGAGTTGTGGGATGAATTACAACAGTTAGAGTTAGGAAGAGAGGATCCTCCTT
TGTTTATTTCGTATGTTGCTTATGCAACTAATGAATCACGGAATAGACTTAGCCTGATTG
CAAGGCCTCTTAATCCTAGAGCTCAAAATCTTAATGTTGTGGTTGCTGCCTTGCCAAGGG
TTTGGGGTCTGACATCTAGAGTTCACGGGAGAGCTGGATCTCTTGTCTGTGCTACGAAGG
GAACCCTGGCTTTACAATAGTTGGTTTGTCACGGCTCATCGTTGGGAGGTAAACTCGGCT
TTTGAATACTTGTCTAACATTGAGTTGTGGGTTCAAATGCGTGGGATTCCTCTCCTCTAT
GTTTGTGAAGCCACAGTGACAGAGATAGCTCTTGGTTTAGGGCAAATTATATCATTGGAT
TTTCATGATGCTACTACAACCCAAATAGCTTTTATTAGAGTGAGAATCCGATTTGAGATC
ACTGATCGTATAAGGTTCTTCCAAAGAATTACCTTTGATTCTGGTGAGACTGCGCTGATA
AGGTTTCAATATGAAAGACTAAGGCGAATTTGCAGTAGCTGTTTCAGGCTGACTCATCAT
AGGAATTACTGCCCTTATCGACAACCTGAGCCTCGTTCTATCATTCGTGGTCCTACCAAC
AATCTCACTAGGTCTAGAAGAGAAGGAGTGTGTACCCGGGATGAATATCATCGTTCTTCC
CTGAACTCCCAATCACAGATGTCTGAGAACGCCTTTCCAGCACCTATTGAACCTCCTCCA
AGAGTGGCAGCTCCTCCTTTGAATCCTGATGAATTTAGGGCTGCTTATTTTCCAGAAGGC
AGAGCAGGTTCTTTACCAAATATAGGAACATTAAATCTTAATCCTCCATCTCGCAGGCAA
GAGGCGTCAAGAAACTCTAATGTACAACCGTTTACGGGTCCTGCATTTGGTGCAAATGTT
CCTCGAGTGGTTGAAGTAGGTGAATGTTCATGACAAGGAGAGTTTGGAGCTTCAAGGACT
CAATTGGATAAGGGAGACTCAATAAAAAGGAAGAATATGGGAAGACCTGGGAGTGATGAA
GAAGGAAGAACTCATAGAGTTGAGGAGCATAAGGAAGGAGGTATTCTGAAACCTCCTAAG
AAGCGTTAAACACTCTGCAAATTCTGTCATTTTTTGGCTTTTGTTGCTGCTGAGGATCCT
TGTTGGCAACTTAAACGTTTGAATAATAGGGACTGCAATGGTACAAGTTTGCAGGTCTAA
GGTTTGCAAAAGTAGCAGATGGAAGTAGAGCCGGTGGAACTCTTTTTGGTTATGACTTCT
CTTATCTGCTGTTGTTGTTTCAGTTTACTCATCACTTTTTGATTTTCGGCATGATCAACA
TTGTGTTTTGTTAGATCATGTTTTTTCTTGTTATAGTGTTTGTCTTCATCCTGTAAGTGG
AAGGTCAACTAGTGTACTTTTTGATGTATGTTCTTAATACAAGGTATGTTCTTAATACAA
GAAAGACAACACTTAGTG