Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT2G03820.1
CDS Infomation	\| nonsense-mediated mRNA decay NMD3 family protein \| Chr2:1165149-1166699 REVERSE LENGTH=1551 \| 201606
Sequence	ATGTCAGTAATGGATGAATCAGGCATGTTTAACGTTCAACAAACCATTGGAAGTGTATTG TGTTGCAAGTGTGGTGTTCCCATGGCACCAAACGCAGCCAACATGTGTGTGAATTGTCTT CGTTCCGAAGTCGATATCACCGAAGGTTTACAGAAGAGTATTCAGATCTTCTATTGCCCT GAATGCACTTGTTACTTACAGCCACCAAAGACTTGGATCAAATGTCAATGGGAATCTAAA GAGCTTTTGACATTTTGTATCAAGAGGTTGAAGAATCTCAATAAGGTTAAGCTGAAGAAC GCTGAATTCGTTTGGACTGAGCCTCATTCCAAGAGGATTAAGGTTAAGTTGACTGTTCAA GCTGAGGTTCTTAATGGTGCTGTTCTTGAACAGTCTTATCCTGTTGAGTATACGGTTAGG GATAATCTGTGCGAGTCGTGTTCGAGGTTTCAGGCTAATCCTGATCAGTGGGTTGCTTCT ATTCAGCTTAGGCAGCATGTTTCGCATAGGAGGACTTTCTTTTATCTCGAACAGTTGATT CTTAGGCACGATGCTGCTTCACGTGCCATTAGAATCCAGCAGGTGGATCAGGGGATTGAT TTCTTCTTTGGGAATAAAAGTCATGCTAATAGCTTTGTGGAGTTTCTGAGGAAAGTTGTC CCCATTGAATACCGTCAGGACCAACAGCTGGTGTCTCATGATGTGAAAAGCAGTTTGTAC AACTATAAGTACACTTACTCTGTTAAGATCTGTCCTGTTTGCCGTGAGGATCTTGTTTGC TTGCCTTCTAAAGTTGCTAGCGGCTTGGGGAACCTTGGTCCACTTGTGGTTTGCACAAAA GTCTCTGATAATATCACTCTACTTGATCCGAGAACTCTAAGGTGTGCCTTCTTGGATGCG AGACAGTACTGGAGGTCTGGGTTCCGATCTGCGCTCACCAGTAGACAACTTGTCAAGTAC TTTGTGTTTGATGTTGAGCCACCTGTTGGTGAAGCGACTGTTGGTGGGCAAAAGTACGCT CTTTCCTATGTCCAGATTGCCCGTGAATCAGACATTGGTAAGATGTTTTATGTCCAAACT CATCTTGGACACATTCTGAAACCTGGGGATCAAGCTTTGGGTTATGACATCTACGGAGCT AATGTGAACGACAATGAAATGGAGAAATACCGTCTGAGTGTGAAGAATGGGCTTCCTGAA GCAATTCTGATCAAGAAATGTTACGAGGAGCAGAGAGAGAGGAAGCAGAAGAAATCCCGT AACTGGAAACTCAAGTCGCTTCCAATGGAAATGGATGATTCAAGAGGCAGGGTTGATCCA GAGAAGACAGACAAAGAATACGAAGAGTTTTTGAGGGATCTTGAAGAAAACCCTGAGCTA AGGTTCAACATATCTTTGTACAGGGACAAGGATTATCAAGCTTCTGAGACTGCTTCAATG ACAGATGGAGAAGGTGCACCATCTGTTCCAATTGAAGAGTTGCTTGCTGACCTTGACCTA AGCTTTGAGGAAGAAGACGATGATGACGAGGACGACATGGCTGCTGAATAA

Peptide Sequence

PEP ID	AT2G03820.1
PEP Infomation	\| nonsense-mediated mRNA decay NMD3 family protein \| Chr2:1165149-1166699 REVERSE LENGTH=516 \| 201606
Sequence	MSVMDESGMFNVQQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCP ECTCYLQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFVWTEPHSKRIKVKLTVQ AEVLNGAVLEQSYPVEYTVRDNLCESCSRFQANPDQWVASIQLRQHVSHRRTFFYLEQLI LRHDAASRAIRIQQVDQGIDFFFGNKSHANSFVEFLRKVVPIEYRQDQQLVSHDVKSSLY NYKYTYSVKICPVCREDLVCLPSKVASGLGNLGPLVVCTKVSDNITLLDPRTLRCAFLDA RQYWRSGFRSALTSRQLVKYFVFDVEPPVGEATVGGQKYALSYVQIARESDIGKMFYVQT HLGHILKPGDQALGYDIYGANVNDNEMEKYRLSVKNGLPEAILIKKCYEEQRERKQKKSR NWKLKSLPMEMDDSRGRVDPEKTDKEYEEFLRDLEENPELRFNISLYRDKDYQASETASM TDGEGAPSVPIEELLADLDLSFEEEDDDDEDDMAAE

Transcript Sequence

Transcript ID	AT2G03820.1
Transcript Infomation	\| nonsense-mediated mRNA decay NMD3 family protein \| Chr2:1164843-1167115 REVERSE LENGTH=2041 \| 201606
Sequence	TTTAGTCTATTACTGTCATGACACGTGGATTTAGATCTTTTTGAATACTATTTTTTCTTA TATACATTTACAGCAAATCATTTCTCTAACATTTTAGGGTTTTACGAAAAAAAAACCTTC ACCGTCTCTGCTCCGCGACGCCGCCTTCGCTTTCTCAAACTCCGATATAATCCTTCTCAG AGATATGTCAGTAATGGATGAATCAGGCATGTTTAACGTTCAACAAACCATTGGAAGTGT ATTGTGTTGCAAGTGTGGTGTTCCCATGGCACCAAACGCAGCCAACATGTGTGTGAATTG TCTTCGTTCCGAAGTCGATATCACCGAAGGTTTACAGAAGAGTATTCAGATCTTCTATTG CCCTGAATGCACTTGTTACTTACAGCCACCAAAGACTTGGATCAAATGTCAATGGGAATC TAAAGAGCTTTTGACATTTTGTATCAAGAGGTTGAAGAATCTCAATAAGGTTAAGCTGAA GAACGCTGAATTCGTTTGGACTGAGCCTCATTCCAAGAGGATTAAGGTTAAGTTGACTGT TCAAGCTGAGGTTCTTAATGGTGCTGTTCTTGAACAGTCTTATCCTGTTGAGTATACGGT TAGGGATAATCTGTGCGAGTCGTGTTCGAGGTTTCAGGCTAATCCTGATCAGTGGGTTGC TTCTATTCAGCTTAGGCAGCATGTTTCGCATAGGAGGACTTTCTTTTATCTCGAACAGTT GATTCTTAGGCACGATGCTGCTTCACGTGCCATTAGAATCCAGCAGGTGGATCAGGGGAT TGATTTCTTCTTTGGGAATAAAAGTCATGCTAATAGCTTTGTGGAGTTTCTGAGGAAAGT TGTCCCCATTGAATACCGTCAGGACCAACAGCTGGTGTCTCATGATGTGAAAAGCAGTTT GTACAACTATAAGTACACTTACTCTGTTAAGATCTGTCCTGTTTGCCGTGAGGATCTTGT TTGCTTGCCTTCTAAAGTTGCTAGCGGCTTGGGGAACCTTGGTCCACTTGTGGTTTGCAC AAAAGTCTCTGATAATATCACTCTACTTGATCCGAGAACTCTAAGGTGTGCCTTCTTGGA TGCGAGACAGTACTGGAGGTCTGGGTTCCGATCTGCGCTCACCAGTAGACAACTTGTCAA GTACTTTGTGTTTGATGTTGAGCCACCTGTTGGTGAAGCGACTGTTGGTGGGCAAAAGTA CGCTCTTTCCTATGTCCAGATTGCCCGTGAATCAGACATTGGTAAGATGTTTTATGTCCA AACTCATCTTGGACACATTCTGAAACCTGGGGATCAAGCTTTGGGTTATGACATCTACGG AGCTAATGTGAACGACAATGAAATGGAGAAATACCGTCTGAGTGTGAAGAATGGGCTTCC TGAAGCAATTCTGATCAAGAAATGTTACGAGGAGCAGAGAGAGAGGAAGCAGAAGAAATC CCGTAACTGGAAACTCAAGTCGCTTCCAATGGAAATGGATGATTCAAGAGGCAGGGTTGA TCCAGAGAAGACAGACAAAGAATACGAAGAGTTTTTGAGGGATCTTGAAGAAAACCCTGA GCTAAGGTTCAACATATCTTTGTACAGGGACAAGGATTATCAAGCTTCTGAGACTGCTTC AATGACAGATGGAGAAGGTGCACCATCTGTTCCAATTGAAGAGTTGCTTGCTGACCTTGA CCTAAGCTTTGAGGAAGAAGACGATGATGACGAGGACGACATGGCTGCTGAATAACTTCG TTTCTCCGATACTCAACAAGGTTTCAGTTTGATCCCAAATCTTTTATTTGCTTCTCTTGT GTTTCTCTCAGTAGACCTTTAATCTTTTGTTGTCCAAGTTTTGTTTTGAATGTAAGCTCA ACAGTTTCTGGTCTAGCTTACGTTGCTATATGTGTTGACATTTTCTGGCTATTATATTTT TGTTTGGAATTTTGATTTGTATACGTGAATTTTTTTACTTTTGGATATGTGAAATATTTG GATGATTGCTTCATAAGCCAATCTTTGTCGCCAATATCGATTTCTTCAACTATTTTGAAG C