Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT2G01080.1
CDS Infomation

| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr2:78038-79176 FORWARD LENGTH=696 | 201606
Sequence

ATGCCTCCTCCTCCTTCTAGTTCTAGAGCAGGTCTCAACGGCGATCCGATTGCTGCTCAG
AACCAGCAGCCGTATTACCGGAGCTACTCATCGTCGTCGTCGGCGTCGCTGAAGGGATGC
TGCTGCTGCTTGTTCTTGCTGTTCGCGTTCCTGGCGCTGCTGGTACTGGCGGTGGTGCTC
ATCGTAATACTGGCGGTGAAGCCGAAGAAGCCGCAGTTCGATCTGCAGCAAGTGGCAGTG
GTGTACATGGGGATCTCCAACCCAAGCGCTGTTCTGGATCCAACCACCGCCTCCCTCTCC
CTCACCATCCGGATGCTCTTCACCGCCGTCAACCCAAACAAGGTCGGAATCAGGTACGGT
GAGTCCAGCTTCACGGTCATGTACAAAGGCATGCCACTGGGGAGGGCGACGGTGCCTGGA
TTCTACCAGGATGCGCACAGTACGAAGAACGTTGAGGCCACCATCTCCGTCGACAGAGTC
AATCTTATGCAAGCCCACGCCGCCGATCTCGTCAGAGATGCTTCCTTGAACGACCGAGTG
GAGCTCACAGTCCGCGGAGACGTGGGGGCTAAGATCCGAGTCATGAATTTCGATTCACCG
GGTGTTCAGGTATCCGTGAATTGCGGGATAGGCATTAGTCCCAGAAAGCAAGCTCTCATT
TACAAGCAATGTGGCTTTGATGGCCTCAGCGTCTAA

Peptide Sequence

PEP ID

AT2G01080.1
PEP Infomation

| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr2:78038-79176 FORWARD LENGTH=231 | 201606
Sequence

MPPPPSSSRAGLNGDPIAAQNQQPYYRSYSSSSSASLKGCCCCLFLLFAFLALLVLAVVL
IVILAVKPKKPQFDLQQVAVVYMGISNPSAVLDPTTASLSLTIRMLFTAVNPNKVGIRYG
ESSFTVMYKGMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQAHAADLVRDASLNDRV
ELTVRGDVGAKIRVMNFDSPGVQVSVNCGIGISPRKQALIYKQCGFDGLSV

Transcript Sequence

Transcript ID

AT2G01080.1
Transcript Infomation

| Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | Chr2:77888-79373 FORWARD LENGTH=1043 | 201606
Sequence

GGTGGTTAAAATTGTGAAACATTAATTTGTCAATAATACTAGAGTCCAGACACGGAAACA
GGGTCTCTCTCTCTTGTTGTGTATAATTTCAACACCGCTATTACAGAAGAAGAGTGAAAA
GGGAGAGGGAGCTTCCTGCTTTCACTTACTATGCCTCCTCCTCCTTCTAGTTCTAGAGCA
GGTCTCAACGGCGATCCGATTGCTGCTCAGAACCAGCAGCCGTATTACCGGAGCTACTCA
TCGTCGTCGTCGGCGTCGCTGAAGGGATGCTGCTGCTGCTTGTTCTTGCTGTTCGCGTTC
CTGGCGCTGCTGGTACTGGCGGTGGTGCTCATCGTAATACTGGCGGTGAAGCCGAAGAAG
CCGCAGTTCGATCTGCAGCAAGTGGCAGTGGTGTACATGGGGATCTCCAACCCAAGCGCT
GTTCTGGATCCAACCACCGCCTCCCTCTCCCTCACCATCCGGATGCTCTTCACCGCCGTC
AACCCAAACAAGGTCGGAATCAGGTACGGTGAGTCCAGCTTCACGGTCATGTACAAAGGC
ATGCCACTGGGGAGGGCGACGGTGCCTGGATTCTACCAGGATGCGCACAGTACGAAGAAC
GTTGAGGCCACCATCTCCGTCGACAGAGTCAATCTTATGCAAGCCCACGCCGCCGATCTC
GTCAGAGATGCTTCCTTGAACGACCGAGTGGAGCTCACAGTCCGCGGAGACGTGGGGGCT
AAGATCCGAGTCATGAATTTCGATTCACCGGGTGTTCAGGTATCCGTGAATTGCGGGATA
GGCATTAGTCCCAGAAAGCAAGCTCTCATTTACAAGCAATGTGGCTTTGATGGCCTCAGC
GTCTAATTCCAAAACTGTAACATAATAATATTATTATATATATATTTGTACTGACTACTC
CCAACTGCAGAGGAGTTGCAAAAAAAGATCCAGCCAAACTGGTAAAGAAATGTAACAAGA
TCCATCCTTCCCCTGCCTTTTTTGGGAAATTTTTGTTTCTACTAGCAACAATGTTTGTTT
ACCATAGATACTAATCAGTAGTT