Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G79730.1
CDS Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr1:30000743-30003969 REVERSE LENGTH=1770 \| 201606
Sequence	ATGGCGTCGTACCGGCCGCCGTATCCTCCTCTTCCTCAGCCACCATCTCAAAATTCTTTG GCCCCTCCGCCTCCCCCGCCGTCGTTACCCCCTCCTGTTCCTCCCCCACCACCGTCGCAT CAACCGTACTCATATCCTCCGCCGCCGCCTCCTCCTCCGCATGCTTACTATCAGCAGGGG CCCCACTATCCTCAATTCAACCAGCTCCAAGCTCCTCCTCCTCCGCCACCTCCCTCAGCT CCTCCTCCGCTCGTTCCCGATCCTCCTCGACACCAGGGTCCCAATGACCACGAGAAAGGG GCCTCCAAGCAGGTTGGAAGGCGGGAGCGTGCTAAACCGGATCCATCGAAGCACCACCAC AGGTCTCATCTTCCTCATTCTAAGAAAATCGAGACCGAAGAAGAGAGGAGGCTTAGGAAG AAGAGGGAGTTAGAGAAACAAAGGCAAGACGAAAAACATAGACAGCAGATGAAAAATTCT CACAAGTCTCAGATGCCCAAGGGACACACCGAGGAGAAGAAGCCGACGCCCCTACTCACC ACCGACAGGGTCGAGAATAGGTTAAAGAAACCAACCACCTTCATCTGCAAGCTCAAGTTC CGGAATGAGCTCCCTGACCCTAGTGCACAGCTTAAGCTTATGACCATTAAACGGGATAAA GATCAATTTACAAAGTATACCATCACATCCCTGGAGAAATTATGGAAACCAAAAATCTTT GTCGAGCCTGATCTTGGAATACCCTTGGATCTGCTTGACCTAAGTGTGTACAACCCTCCC AAAGTCAAGGCACCTCTTGCCCCTGAAGATGAAGAACTCTTGCGTGATGATGACGCTGTT ACACCTATTAAGAAAGATGGCATCCGGAGGAAAGAAAGACCTACTGATAAAGGCATGTCT TGGCTCGTCAAAACACAATACATTTCTTCTATTAATAACGAATCGGCAAGACAGTCGCTA ACGGAGAAGCAAGCAAAGGAACTGCGAGAGATGAAAGGAGGCATCAACATCTTGCACAAT CTTAACAATAGAGAGAGACAAATCAAGGATATTGAAGCATCCTTTGAGGCATGCAAGTCT CGACCAGTTCATGCCACCAATAAAAACTTGCAGCCGGTTGAAGTTCTACCACTGTTGCCA TATTTTGATAGGTACGATGAGCAGTTTGTGGTAGCGAATTTTGATGGTGCTCCTATAGCT GATTCTGAATTCTTTGGCAAGTTGGACCCTTCAATTCGTGATGCACATGAGTCACGGGCC ATTTTGAAAAGCTATGTGGTGGCTGGATCAGACACTGCCAATCCAGAAAAATTTCTGGCG TACATGGTTCCTTCCTTGGATGAGTTGTCTAAGGATATCCATGATGAAAACGAAGAAATC TCTTACACTTGGGTTCGCGAATACCTCTGGGATGTACAACCCAATGCAAACGATCCTGGC ACATACCTGGTATCATTTGACAATGGGACCGCTAGCTATCTGCCCCTACCCATGAGGTTG AACTTGAGGAAGAAAAGGGCCAGGGAAGGAAGATCTTCTGATGAGATTGAACACTTTCCA GTACCTTCAAGGGTAACTGTAAGGCGGAGATCAACTGTATCAGTGATAGAACATAAAGAT TCAGGGGTTTACTCTTCTAGGGTTGGTGCTTCGAGCTCCAAGATGAGAAGATTAGAGGAC GAAGGCGGCCTTGGTAGATCTTGGAAACACGAGCCGGAACAAGATGCCAATCAATATAGT GATGGTAATGAGGATGATTATTCTGAATGA

Peptide Sequence

PEP ID	AT1G79730.1
PEP Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr1:30000743-30003969 REVERSE LENGTH=589 \| 201606
Sequence	MASYRPPYPPLPQPPSQNSLAPPPPPPSLPPPVPPPPPSHQPYSYPPPPPPPPHAYYQQG PHYPQFNQLQAPPPPPPPSAPPPLVPDPPRHQGPNDHEKGASKQVGRRERAKPDPSKHHH RSHLPHSKKIETEEERRLRKKRELEKQRQDEKHRQQMKNSHKSQMPKGHTEEKKPTPLLT TDRVENRLKKPTTFICKLKFRNELPDPSAQLKLMTIKRDKDQFTKYTITSLEKLWKPKIF VEPDLGIPLDLLDLSVYNPPKVKAPLAPEDEELLRDDDAVTPIKKDGIRRKERPTDKGMS WLVKTQYISSINNESARQSLTEKQAKELREMKGGINILHNLNNRERQIKDIEASFEACKS RPVHATNKNLQPVEVLPLLPYFDRYDEQFVVANFDGAPIADSEFFGKLDPSIRDAHESRA ILKSYVVAGSDTANPEKFLAYMVPSLDELSKDIHDENEEISYTWVREYLWDVQPNANDPG TYLVSFDNGTASYLPLPMRLNLRKKRAREGRSSDEIEHFPVPSRVTVRRRSTVSVIEHKD SGVYSSRVGASSSKMRRLEDEGGLGRSWKHEPEQDANQYSDGNEDDYSE

Transcript Sequence

Transcript ID	AT1G79730.1
Transcript Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr1:30000538-30004083 REVERSE LENGTH=2089 \| 201606
Sequence	CCCAAATTAAAGTAAAAAGGAAAAATCAGTCTGACCGGAGCTATATAATTAATATATATC AAGAAGACTCGTTTTAGTTGGTTTAGGTGATTCAGATCACAAAGTACACCGAGAATGGCG TCGTACCGGCCGCCGTATCCTCCTCTTCCTCAGCCACCATCTCAAAATTCTTTGGCCCCT CCGCCTCCCCCGCCGTCGTTACCCCCTCCTGTTCCTCCCCCACCACCGTCGCATCAACCG TACTCATATCCTCCGCCGCCGCCTCCTCCTCCGCATGCTTACTATCAGCAGGGGCCCCAC TATCCTCAATTCAACCAGCTCCAAGCTCCTCCTCCTCCGCCACCTCCCTCAGCTCCTCCT CCGCTCGTTCCCGATCCTCCTCGACACCAGGGTCCCAATGACCACGAGAAAGGGGCCTCC AAGCAGGTTGGAAGGCGGGAGCGTGCTAAACCGGATCCATCGAAGCACCACCACAGGTCT CATCTTCCTCATTCTAAGAAAATCGAGACCGAAGAAGAGAGGAGGCTTAGGAAGAAGAGG GAGTTAGAGAAACAAAGGCAAGACGAAAAACATAGACAGCAGATGAAAAATTCTCACAAG TCTCAGATGCCCAAGGGACACACCGAGGAGAAGAAGCCGACGCCCCTACTCACCACCGAC AGGGTCGAGAATAGGTTAAAGAAACCAACCACCTTCATCTGCAAGCTCAAGTTCCGGAAT GAGCTCCCTGACCCTAGTGCACAGCTTAAGCTTATGACCATTAAACGGGATAAAGATCAA TTTACAAAGTATACCATCACATCCCTGGAGAAATTATGGAAACCAAAAATCTTTGTCGAG CCTGATCTTGGAATACCCTTGGATCTGCTTGACCTAAGTGTGTACAACCCTCCCAAAGTC AAGGCACCTCTTGCCCCTGAAGATGAAGAACTCTTGCGTGATGATGACGCTGTTACACCT ATTAAGAAAGATGGCATCCGGAGGAAAGAAAGACCTACTGATAAAGGCATGTCTTGGCTC GTCAAAACACAATACATTTCTTCTATTAATAACGAATCGGCAAGACAGTCGCTAACGGAG AAGCAAGCAAAGGAACTGCGAGAGATGAAAGGAGGCATCAACATCTTGCACAATCTTAAC AATAGAGAGAGACAAATCAAGGATATTGAAGCATCCTTTGAGGCATGCAAGTCTCGACCA GTTCATGCCACCAATAAAAACTTGCAGCCGGTTGAAGTTCTACCACTGTTGCCATATTTT GATAGGTACGATGAGCAGTTTGTGGTAGCGAATTTTGATGGTGCTCCTATAGCTGATTCT GAATTCTTTGGCAAGTTGGACCCTTCAATTCGTGATGCACATGAGTCACGGGCCATTTTG AAAAGCTATGTGGTGGCTGGATCAGACACTGCCAATCCAGAAAAATTTCTGGCGTACATG GTTCCTTCCTTGGATGAGTTGTCTAAGGATATCCATGATGAAAACGAAGAAATCTCTTAC ACTTGGGTTCGCGAATACCTCTGGGATGTACAACCCAATGCAAACGATCCTGGCACATAC CTGGTATCATTTGACAATGGGACCGCTAGCTATCTGCCCCTACCCATGAGGTTGAACTTG AGGAAGAAAAGGGCCAGGGAAGGAAGATCTTCTGATGAGATTGAACACTTTCCAGTACCT TCAAGGGTAACTGTAAGGCGGAGATCAACTGTATCAGTGATAGAACATAAAGATTCAGGG GTTTACTCTTCTAGGGTTGGTGCTTCGAGCTCCAAGATGAGAAGATTAGAGGACGAAGGC GGCCTTGGTAGATCTTGGAAACACGAGCCGGAACAAGATGCCAATCAATATAGTGATGGT AATGAGGATGATTATTCTGAATGAACGTTTCGTGTACCTCAAACTATTGAATCGGTTTTG CAATGGTTTTCCTGCAAGGCTATTGTAGGCTAATTTAAAAGCGTAATATGGCCTCCACCA CAGCTTTGTAGTTTGGCAAGTAAAGAAATTTTGATTTGGATAGCTGGCGAAGTTGAAAAA CGATTTTACATGTACACGTCCATAATTAATGAATTGGCCATTTACGACT