Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G79540.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:29920334-29922676 REVERSE LENGTH=2343 \| 201606
Sequence	ATGAAACCACAGATGTTCTTTCGATCAGTCATTCAGTTCTATTCAAAGCCGTCATGGATG CAACGTTCCTACTCTTCCGGTAACGCCGAATTCAATATCTCCGGCGAGGTCATCAGCATT CTAGCTAAGAAGAAACCTATAGAGCCTGCTTTGGAGCCGCTTGTTCCGTTTCTCTCGAAG AATATCATCACATCGGTAATCAAAGATGAGGTCAATAGACAATTAGGATTCCGTTTTTTT ATATGGGCGTCGAGAAGAGAGCGTCTCAGGAGCCGAGAGTCTTTTGGTTTGGTCATCGAT ATGCTCTCTGAAGATAATGGTTGCGATCTATATTGGCAGACATTGGAGGAGCTTAAATCT GGTGGCGTCTCTGTCGATTCTTATTGCTTCTGTGTTTTGATCTCTGCTTATGCTAAGATG GGTATGGCGGAAAAAGCAGTGGAATCGTTTGGAAGGATGAAGGAGTTTGATTGCAGACCC GATGTGTTCACGTACAACGTGATATTGCGAGTCATGATGCGAGAGGAGGTCTTCTTTATG CTGGCTTTTGCTGTGTACAATGAAATGCTCAAGTGCAATTGTTCCCCAAATCTATACACG TTTGGTATCTTGATGGATGGATTGTATAAGAAAGGGAGAACGAGTGATGCACAGAAGATG TTCGACGATATGACCGGTAGAGGAATTTCGCCTAACAGAGTTACCTATACCATTCTCATT TCAGGTTTGTGTCAGAGGGGAAGTGCTGACGATGCACGAAAGCTATTCTACGAGATGCAA ACGAGCGGTAACTATCCTGATTCCGTCGCACACAATGCTTTGCTTGATGGGTTTTGTAAA TTGGGTCGGATGGTTGAAGCATTTGAGCTGTTGCGGCTTTTTGAGAAAGATGGTTTTGTG CTTGGTCTTCGAGGTTATAGCAGTTTAATCGATGGATTGTTCAGAGCTAGGAGATACACT CAGGCATTTGAGCTGTATGCAAATATGCTGAAGAAGAATATTAAACCTGACATCATTTTG TACACGATATTGATTCAAGGGTTATCTAAAGCCGGTAAGATTGAGGATGCATTGAAGCTG TTAAGCAGCATGCCAAGTAAGGGCATTAGCCCAGATACCTACTGTTACAATGCTGTTATA AAGGCTCTATGTGGGAGGGGACTTTTGGAAGAGGGTCGGTCCCTCCAACTCGAAATGTCA GAAACGGAATCCTTCCCTGATGCGTGCACACACACAATTCTTATCTGTAGTATGTGCAGG AATGGGCTGGTTAGGGAAGCTGAAGAAATTTTTACGGAGATTGAGAAGAGTGGTTGTTCT CCTTCGGTTGCTACGTTCAATGCTTTAATTGATGGACTGTGCAAGTCCGGTGAGCTCAAG GAAGCCAGGTTATTGTTGCATAAAATGGAGGTCGGGAGACCTGCTTCCTTGTTTCTTAGG CTTTCGCACAGTGGAAACCGGAGTTTTGACACCATGGTTGAATCCGGTTCGATTCTCAAG GCATACAGGGATCTTGCACATTTTGCTGATACCGGGAGTTCGCCAGACATTGTTTCTTAC AATGTTCTTATAAATGGGTTCTGCAGAGCAGGAGACATTGACGGTGCTCTCAAGCTTCTC AATGTGCTTCAACTAAAGGGATTATCCCCTGATAGCGTCACTTACAACACTCTCATCAAT GGACTTCATAGAGTCGGCAGAGAAGAAGAAGCTTTTAAACTCTTTTACGCTAAAGATGAT TTTAGACACAGTCCCGCGGTTTACAGATCGCTCATGACATGGTCATGTCGGAAAAGAAAA GTCTTGGTGGCTTTTAATCTATGGATGAAATACCTTAAGAAGATATCTTGTCTGGATGAT GAAACAGCTAATGAGATTGAACAATGTTTCAAGGAAGGGGAAACCGAGAGAGCTTTAAGA CGACTTATTGAATTAGATACCAGAAAAGACGAGTTAACTTTAGGGCCTTACACGATATGG CTTATCGGGTTATGCCAATCAGGGAGATTTCACGAGGCCTTGATGGTGTTTTCGGTTTTA AGGGAGAAGAAGATCCTTGTAACACCTCCGAGCTGTGTCAAACTGATTCATGGACTCTGC AAAAGAGAACAACTTGATGCTGCAATAGAGGTGTTCTTATACACTCTAGATAACAACTTC AAGCTGATGCCTAGAGTTTGCAACTACCTCCTAAGCTCCCTCCTGGAATCAACAGAAAAG ATGGAGATTGTTTCGCAACTTACAAACAGAATGGAACGTGCAGGGTACAATGTTGACTCG ATGCTTCGATTCGAGATTTTGAAATATCATAGACATAGAAAGCAGGTGCTGATAGATCTT TAG

Peptide Sequence

PEP ID	AT1G79540.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:29920334-29922676 REVERSE LENGTH=780 \| 201606
Sequence	MKPQMFFRSVIQFYSKPSWMQRSYSSGNAEFNISGEVISILAKKKPIEPALEPLVPFLSK NIITSVIKDEVNRQLGFRFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKS GGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFM LAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI SGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV LGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKL LSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCR NGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLR LSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL NVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRK VLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIW LIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNF KLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGYNVDSMLRFEILKYHRHRKQVLIDL

Transcript Sequence

Transcript ID	AT1G79540.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:29919975-29923124 REVERSE LENGTH=3150 \| 201606
Sequence	TTTTTCGGTTTTCTAATTCTAATATGTAGGAATCTGATAGAAGATTTTATTCTGTACCCA AAACCGAGACGTTCCACTAATTCTCGATACCGGTTTACCCACTAACCGGCTGAAATCGAT CCAGACTTTGCTCCGATGGCAGAAAACCCTTGACGATCAAAGAAAGCCGTCTTCTTCCCC AGACAGAGTCTCTTCCATCTATCTTTAATCGGAGGAGGATTTGAAATCTCTTCAGATCAC CGGAAGTTCTGTGAGCTTTCTCTCCCGTCTAATCTCTCCGACCAATCCAAGTGAAGGTGG GCGGCGGAGTATTGCCGCCTAATTCTTATCTCATTTGGTGTTCTTCATTTGTTAGTCATG GAATCCAATCCCCTTCTAAACCCCTAATTTCTGCATCTACGAACTCTGCAACAATGAGAT TTGATTTCTCATCGGCTTCGCATTTACTATGAAACCACAGATGTTCTTTCGATCAGTCAT TCAGTTCTATTCAAAGCCGTCATGGATGCAACGTTCCTACTCTTCCGGTAACGCCGAATT CAATATCTCCGGCGAGGTCATCAGCATTCTAGCTAAGAAGAAACCTATAGAGCCTGCTTT GGAGCCGCTTGTTCCGTTTCTCTCGAAGAATATCATCACATCGGTAATCAAAGATGAGGT CAATAGACAATTAGGATTCCGTTTTTTTATATGGGCGTCGAGAAGAGAGCGTCTCAGGAG CCGAGAGTCTTTTGGTTTGGTCATCGATATGCTCTCTGAAGATAATGGTTGCGATCTATA TTGGCAGACATTGGAGGAGCTTAAATCTGGTGGCGTCTCTGTCGATTCTTATTGCTTCTG TGTTTTGATCTCTGCTTATGCTAAGATGGGTATGGCGGAAAAAGCAGTGGAATCGTTTGG AAGGATGAAGGAGTTTGATTGCAGACCCGATGTGTTCACGTACAACGTGATATTGCGAGT CATGATGCGAGAGGAGGTCTTCTTTATGCTGGCTTTTGCTGTGTACAATGAAATGCTCAA GTGCAATTGTTCCCCAAATCTATACACGTTTGGTATCTTGATGGATGGATTGTATAAGAA AGGGAGAACGAGTGATGCACAGAAGATGTTCGACGATATGACCGGTAGAGGAATTTCGCC TAACAGAGTTACCTATACCATTCTCATTTCAGGTTTGTGTCAGAGGGGAAGTGCTGACGA TGCACGAAAGCTATTCTACGAGATGCAAACGAGCGGTAACTATCCTGATTCCGTCGCACA CAATGCTTTGCTTGATGGGTTTTGTAAATTGGGTCGGATGGTTGAAGCATTTGAGCTGTT GCGGCTTTTTGAGAAAGATGGTTTTGTGCTTGGTCTTCGAGGTTATAGCAGTTTAATCGA TGGATTGTTCAGAGCTAGGAGATACACTCAGGCATTTGAGCTGTATGCAAATATGCTGAA GAAGAATATTAAACCTGACATCATTTTGTACACGATATTGATTCAAGGGTTATCTAAAGC CGGTAAGATTGAGGATGCATTGAAGCTGTTAAGCAGCATGCCAAGTAAGGGCATTAGCCC AGATACCTACTGTTACAATGCTGTTATAAAGGCTCTATGTGGGAGGGGACTTTTGGAAGA GGGTCGGTCCCTCCAACTCGAAATGTCAGAAACGGAATCCTTCCCTGATGCGTGCACACA CACAATTCTTATCTGTAGTATGTGCAGGAATGGGCTGGTTAGGGAAGCTGAAGAAATTTT TACGGAGATTGAGAAGAGTGGTTGTTCTCCTTCGGTTGCTACGTTCAATGCTTTAATTGA TGGACTGTGCAAGTCCGGTGAGCTCAAGGAAGCCAGGTTATTGTTGCATAAAATGGAGGT CGGGAGACCTGCTTCCTTGTTTCTTAGGCTTTCGCACAGTGGAAACCGGAGTTTTGACAC CATGGTTGAATCCGGTTCGATTCTCAAGGCATACAGGGATCTTGCACATTTTGCTGATAC CGGGAGTTCGCCAGACATTGTTTCTTACAATGTTCTTATAAATGGGTTCTGCAGAGCAGG AGACATTGACGGTGCTCTCAAGCTTCTCAATGTGCTTCAACTAAAGGGATTATCCCCTGA TAGCGTCACTTACAACACTCTCATCAATGGACTTCATAGAGTCGGCAGAGAAGAAGAAGC TTTTAAACTCTTTTACGCTAAAGATGATTTTAGACACAGTCCCGCGGTTTACAGATCGCT CATGACATGGTCATGTCGGAAAAGAAAAGTCTTGGTGGCTTTTAATCTATGGATGAAATA CCTTAAGAAGATATCTTGTCTGGATGATGAAACAGCTAATGAGATTGAACAATGTTTCAA GGAAGGGGAAACCGAGAGAGCTTTAAGACGACTTATTGAATTAGATACCAGAAAAGACGA GTTAACTTTAGGGCCTTACACGATATGGCTTATCGGGTTATGCCAATCAGGGAGATTTCA CGAGGCCTTGATGGTGTTTTCGGTTTTAAGGGAGAAGAAGATCCTTGTAACACCTCCGAG CTGTGTCAAACTGATTCATGGACTCTGCAAAAGAGAACAACTTGATGCTGCAATAGAGGT GTTCTTATACACTCTAGATAACAACTTCAAGCTGATGCCTAGAGTTTGCAACTACCTCCT AAGCTCCCTCCTGGAATCAACAGAAAAGATGGAGATTGTTTCGCAACTTACAAACAGAAT GGAACGTGCAGGGTACAATGTTGACTCGATGCTTCGATTCGAGATTTTGAAATATCATAG ACATAGAAAGCAGGTGCTGATAGATCTTTAGGTAATGAAATGATTATTAAAGGTTTATCT ACATCCGGATTCATAGGCATTAGTTTTGTGGAGAAGAGAAATATGAGTTTTGATTCGAAT CTCTTTACCTTAACACTACATTAGAATAGAAAAATCTCTGGAACCGGAAGCTCTTTGAGG AAAAGGAAAAGGAAAAATATGAGGTTTATACGTAAATGCTTTGTATGCTTTATTGTTCAT GAAGTTTTTCCTTATCTTTATTGTACACTGATTTGTTTTGTATTATGATGTTAAATTTCT TTGAAATAAAGACTAAACATGTCTAAATCTTTCTGGTTTCCTTCCAAGACCTGTTCCAAC ATTTTTGACCCTCCCATAAATTATGTACAC