Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G79490.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:29900617-29903127 FORWARD LENGTH=2511 \| 201606
Sequence	ATGATCCGTGGAAGAACCGCGAAAGTAATTCCCAGAAATGTCATTTTTACGCTTAGTAGG AGTTCCATTTCTGAGTCTCCATTGATTTCTCCGAGTCGAATAAACCCTAAATTAGCCGGT AGTTTCTCGTTCAACATCCGATTATTGAGCTATTTCACTGTTAGAAATGGCTTTTGTCCC GATTGTTCTGTACCGAGAGACCCTAATTTTGTTGGATTGACTACACAATGTCGGAGTATT GTCAGGAGGTTTTGTAGTGAAAAGATTGGAAGTAGTGAATCTAGTGGCTGGACAGAGGAG GTTGAGTATTTAGATGAGTCGGGTAGTGTACTACACAGTGGTAAGGGAATAAGATCAGTA GAGCCAGGGCTTGATGACCATGTAATGGTTGGTGGATTGAAGAAGCCTTACATGAATGCT TCTTCTGTTGCAAAGATTGTTGAAGTTGTTCAGAGGTGGAAATGGGGACCGGAGTTGGAG ACTCAGTTAGATAAACTCCAGTTTGTTCCGAATATGGTTCATATTACGCAGTCTTTGAAG ATTGTTAAAGAGGTTGATGCGGCGCTGAGTCTGTTTAGGTGGGCTAAGAAGCAGCCTTGG TATCTGCCTTCGGATGAATGTTATGTCGTGTTGTTTGATGGGTTGAACCAGGGAAGGGAT TTTGTTGGGATTCAGTCGTTGTTTGAGGAGATGGTTCAAGACTCGAGTAGTCACGGTGAT TTGTCGTTTAACGCCTATAACCAAGTGATTCAGTATTTGGCTAAAGCTGAGAAACTGGAG GTTGCTTTTTGTTGTTTCAAAAAGGCTCAAGAGTCGGGATGCAAAATTGATACGCAGACA TATAATAATCTAATGATGTTGTTTCTGAACAAAGGTCTCCCGTATAAGGCATTTGAGATT TATGAGAGCATGGAGAAAACTGATAGTTTGTTGGATGGGTCAACTTATGAGCTGATAATT CCAAGCTTGGCCAAATCCGGCCGTCTTGATGCAGCTTTCAAGCTTTTTCAGCAAATGAAA GAAAGGAAACTCCGACCAAGCTTTAGTGTGTTTTCTTCGCTTGTTGATTCAATGGGGAAA GCTGGTCGATTGGACACATCAATGAAGGTTTACATGGAAATGCAGGGATTTGGCCATAGG CCATCAGCAACTATGTTTGTTTCCTTGATTGATTCATATGCTAAAGCTGGTAAGCTGGAT ACTGCTCTTAGGCTTTGGGATGAGATGAAGAAGTCAGGTTTCAGGCCAAACTTTGGATTG TACACAATGATCATTGAATCTCATGCAAAATCAGGAAAGCTTGAAGTAGCAATGACGGTT TTCAAAGACATGGAGAAAGCTGGGTTTTTACCGACACCATCCACATATTCGTGTCTATTG GAGATGCATGCTGGATCTGGGCAAGTAGACTCTGCAATGAAAATCTATAACTCCATGACT AATGCTGGGTTAAGGCCTGGCCTGAGCAGTTATATTTCTCTTCTTACACTTCTGGCCAAC AAAAGACTTGTCGATGTTGCTGGGAAGATACTACTCGAGATGAAAGCAATGGGGTATTCC GTAGATGTCTGCGCTAGCGATGTTTTGATGATATATATCAAAGATGCTTCTGTGGATCTT GCTCTGAAATGGCTTAGGTTCATGGGTTCTTCAGGGATCAAAACAAACAATTTTATCATC AGGCAGTTATTTGAATCATGCATGAAAAATGGTCTATACGATTCAGCTAGGCCTTTGCTG GAGACACTCGTGCATTCTGCTGGAAAAGTTGACTTGGTGCTTTACACTTCGATTCTCGCC CATCTTGTCAGATGCCAAGACGAAGATAAAGAGAGACAATTGATGTCAATCCTCAGCGCT ACCAAGCATAAAGCTCATGCCTTTATGTGTGGTCTCTTCACAGGTCCAGAACAGAGGAAA CAACCAGTTCTAACGTTTGTCAGAGAGTTTTACCAAGGGATTGATTACGAACTCGAAGAA GGAGCTGCTAGGTACTTTGTGAATGTCCTTCTCAACTACCTTGTCTTGATGGGTCAAATA AACCGAGCTCGATGTGTCTGGAAAGTAGCGTACGAGAACAAACTCTTTCCAAAAGCCATC GTCTTTGATCAACACATTGCTTGGTCTCTCGATGTGAGAAACTTATCTGTCGGAGCTGCG CTCATAGCCGTGGTTCACACTCTCCACAGGTTCAGAAAACGAATGCTTTACTACGGAGTA GTCCCGAGACGTATAAAGCTAGTCACAGGACCGACATTGAAGATTGTAATTGCTCAAATG CTGAGCTCTGTTGAGTCGCCTTTTGAAGTCAGCAAAGTCGTCTTGAGGGCACCAGGAGAG TTGGTGATGGAGTGGTTCAAGAAACCGATCGTGCAACAGTTTCTTCTGAACGAGATCCCA TCACGGTCTGATATATTGATGCATAAGATGAACGTGATGTTCCCAAGCTCGGCTCCTGAG CTTAGATCTATGTCACCTCCCAAACCACTCATGTCATCGAAAGCGTTCTAA

Peptide Sequence

PEP ID	AT1G79490.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:29900617-29903127 FORWARD LENGTH=836 \| 201606
Sequence	MIRGRTAKVIPRNVIFTLSRSSISESPLISPSRINPKLAGSFSFNIRLLSYFTVRNGFCP DCSVPRDPNFVGLTTQCRSIVRRFCSEKIGSSESSGWTEEVEYLDESGSVLHSGKGIRSV EPGLDDHVMVGGLKKPYMNASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLK IVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGD LSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEI YESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGK AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMT NAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDL ALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILA HLVRCQDEDKERQLMSILSATKHKAHAFMCGLFTGPEQRKQPVLTFVREFYQGIDYELEE GAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAA LIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESPFEVSKVVLRAPGE LVMEWFKKPIVQQFLLNEIPSRSDILMHKMNVMFPSSAPELRSMSPPKPLMSSKAF

Transcript Sequence

Transcript ID	AT1G79490.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:29900443-29903319 FORWARD LENGTH=2877 \| 201606
Sequence	AAAAAAAATAATCTATTTTGGGAAAACCCCACACTGTTCTAAAGCCTCTGGTTTTAGGGT TTAAGCCGACGGAGGAGACGGAAAAATCGCCATCTCTGGAGTCCAGGTTAGAATTGATTC CTCAAATTTCAATTCTTCGCATTACATGACCCAATAATTCCGTCTACATCTTCGATGATC CGTGGAAGAACCGCGAAAGTAATTCCCAGAAATGTCATTTTTACGCTTAGTAGGAGTTCC ATTTCTGAGTCTCCATTGATTTCTCCGAGTCGAATAAACCCTAAATTAGCCGGTAGTTTC TCGTTCAACATCCGATTATTGAGCTATTTCACTGTTAGAAATGGCTTTTGTCCCGATTGT TCTGTACCGAGAGACCCTAATTTTGTTGGATTGACTACACAATGTCGGAGTATTGTCAGG AGGTTTTGTAGTGAAAAGATTGGAAGTAGTGAATCTAGTGGCTGGACAGAGGAGGTTGAG TATTTAGATGAGTCGGGTAGTGTACTACACAGTGGTAAGGGAATAAGATCAGTAGAGCCA GGGCTTGATGACCATGTAATGGTTGGTGGATTGAAGAAGCCTTACATGAATGCTTCTTCT GTTGCAAAGATTGTTGAAGTTGTTCAGAGGTGGAAATGGGGACCGGAGTTGGAGACTCAG TTAGATAAACTCCAGTTTGTTCCGAATATGGTTCATATTACGCAGTCTTTGAAGATTGTT AAAGAGGTTGATGCGGCGCTGAGTCTGTTTAGGTGGGCTAAGAAGCAGCCTTGGTATCTG CCTTCGGATGAATGTTATGTCGTGTTGTTTGATGGGTTGAACCAGGGAAGGGATTTTGTT GGGATTCAGTCGTTGTTTGAGGAGATGGTTCAAGACTCGAGTAGTCACGGTGATTTGTCG TTTAACGCCTATAACCAAGTGATTCAGTATTTGGCTAAAGCTGAGAAACTGGAGGTTGCT TTTTGTTGTTTCAAAAAGGCTCAAGAGTCGGGATGCAAAATTGATACGCAGACATATAAT AATCTAATGATGTTGTTTCTGAACAAAGGTCTCCCGTATAAGGCATTTGAGATTTATGAG AGCATGGAGAAAACTGATAGTTTGTTGGATGGGTCAACTTATGAGCTGATAATTCCAAGC TTGGCCAAATCCGGCCGTCTTGATGCAGCTTTCAAGCTTTTTCAGCAAATGAAAGAAAGG AAACTCCGACCAAGCTTTAGTGTGTTTTCTTCGCTTGTTGATTCAATGGGGAAAGCTGGT CGATTGGACACATCAATGAAGGTTTACATGGAAATGCAGGGATTTGGCCATAGGCCATCA GCAACTATGTTTGTTTCCTTGATTGATTCATATGCTAAAGCTGGTAAGCTGGATACTGCT CTTAGGCTTTGGGATGAGATGAAGAAGTCAGGTTTCAGGCCAAACTTTGGATTGTACACA ATGATCATTGAATCTCATGCAAAATCAGGAAAGCTTGAAGTAGCAATGACGGTTTTCAAA GACATGGAGAAAGCTGGGTTTTTACCGACACCATCCACATATTCGTGTCTATTGGAGATG CATGCTGGATCTGGGCAAGTAGACTCTGCAATGAAAATCTATAACTCCATGACTAATGCT GGGTTAAGGCCTGGCCTGAGCAGTTATATTTCTCTTCTTACACTTCTGGCCAACAAAAGA CTTGTCGATGTTGCTGGGAAGATACTACTCGAGATGAAAGCAATGGGGTATTCCGTAGAT GTCTGCGCTAGCGATGTTTTGATGATATATATCAAAGATGCTTCTGTGGATCTTGCTCTG AAATGGCTTAGGTTCATGGGTTCTTCAGGGATCAAAACAAACAATTTTATCATCAGGCAG TTATTTGAATCATGCATGAAAAATGGTCTATACGATTCAGCTAGGCCTTTGCTGGAGACA CTCGTGCATTCTGCTGGAAAAGTTGACTTGGTGCTTTACACTTCGATTCTCGCCCATCTT GTCAGATGCCAAGACGAAGATAAAGAGAGACAATTGATGTCAATCCTCAGCGCTACCAAG CATAAAGCTCATGCCTTTATGTGTGGTCTCTTCACAGGTCCAGAACAGAGGAAACAACCA GTTCTAACGTTTGTCAGAGAGTTTTACCAAGGGATTGATTACGAACTCGAAGAAGGAGCT GCTAGGTACTTTGTGAATGTCCTTCTCAACTACCTTGTCTTGATGGGTCAAATAAACCGA GCTCGATGTGTCTGGAAAGTAGCGTACGAGAACAAACTCTTTCCAAAAGCCATCGTCTTT GATCAACACATTGCTTGGTCTCTCGATGTGAGAAACTTATCTGTCGGAGCTGCGCTCATA GCCGTGGTTCACACTCTCCACAGGTTCAGAAAACGAATGCTTTACTACGGAGTAGTCCCG AGACGTATAAAGCTAGTCACAGGACCGACATTGAAGATTGTAATTGCTCAAATGCTGAGC TCTGTTGAGTCGCCTTTTGAAGTCAGCAAAGTCGTCTTGAGGGCACCAGGAGAGTTGGTG ATGGAGTGGTTCAAGAAACCGATCGTGCAACAGTTTCTTCTGAACGAGATCCCATCACGG TCTGATATATTGATGCATAAGATGAACGTGATGTTCCCAAGCTCGGCTCCTGAGCTTAGA TCTATGTCACCTCCCAAACCACTCATGTCATCGAAAGCGTTCTAACAGGGGAGACAAAAG TCATGGGTTTTTGTAGGCGGGTTCTCTGTTTCAGATCTCTCATTGTTAATACTTGTCTGA AAATATAATGGAAATGATATTTACGTCTTTAAATCATTGTTAGTTCATTTTTGTTCGATT ACGTCTTTAATGTCTCCGAGTAAAGCTTACGTCCTTATCCTGGATAGGAATTAATCT