Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G79350.1
CDS Infomation	\| RING/FYVE/PHD zinc finger superfamily protein \| Chr1:29844829-29853215 REVERSE LENGTH=3888 \| 201606
Sequence	ATGACGCAGTCGCCTGTTCAACCGCCTCCGCCGCTCCCAGCTCAGCCGCATTCCGCCGCC GGAGGTGTAATAAGAGGCGATGTACAGGTTAGGTGCGCAGGCTGTCGCGTGATTCTGAGG GTGAAAACCGGCGTTGTGGAGTTCTCGTGTCCGACTTGTCAACTTCCCCAAATGTTGCCG CCGGAGCTTCTTTCTAGGGCACGGCCGCAGTTTCCGCAGTCTCCACAACAACCACCACAG CCAATTCAGACGCTTCCGCCACCGATTCAACAGCAGCTTAAGCCTCTTAATCTACCTAGG CCTCCGGTTCCGGCACATGGAATCGATCCGACGAAGATGCAATTGCCTTGCGCTAACTGT CAGGCTATCCTCAATGTGCCTCATGGACTCACTCGGTTCTCGTGTCCTCAGTGCCATGTC GAGCTCGCTGTTGATGTCTCCAAGCTTAATCGGTCTTTAACTGCTTCTCAATCTCATTCT AATCCTCCTACTCCTGCTGCTCCCACAGTCCCGCCTCCGCCTCCTCCCGAAGAAGTCAAT GAGGAAGCTATTGAAGTGGAGAGAGAAGAAGATGAAGGTGGAACGGCTGGAGAAACGTTT ATGGATTATCGTCCCCCAAAACTTTCGATCGGACCTCCTCATCCTGATCCAATTGTGGAA ACATCATCTCTATCTGCAGTGCAACCCCCAGAGCCTACTTATGATCTCAAAATCAAGGAA GAGCTTGAAAGGTCAAAGGCTTTATCGTGTTTGCAGATTGAGACATTAGTTTACGCTTGC CAGAGGCATCTCCAGCACCTTGCTGATGGTACCAGAGCAGGCTTTTTTGTTGGAGATGGT GCTGGTGTGGGCAAAGGGCGAACAATTGCCGGGTTGATTTGGGAAAATTGGAAACATGGA AGGAGGAAAGCTTTGTGGATTTCTATTGGCTCAGACTTGAAATATGATGCAAGAAGGGAC TTGGATGATGTGGGTGCTACATGCGTTGGAGTGAATCCTTTGAACAAGCTACCCTATTCT AAGCTTGACTCGAAAAATGTTGGTATTAAAGAAGGAGTGGTATTCTTGACATACAATAGC CTCATTGCTTCCTCTGAGAAGGGCCGTTCTCGTTTACAGCAGCTTGTTCAATGGTGTGGA CCAGAATTTGATGGTCTCTTGATCTTTGATGAGTGCCATAAAGCGAAAAATTTGGTACCT GAAGCTGGGAGTCAGCCGACACGCATCGGACAGGCAGTTGTTGACATTCAGGATAAGATC CCCCAAGCACGTGTTATTTATTGCTCGGCTACTGGGGCATCAGAACCACGAAACATGGGT TATATGGTCAGGCTTGGTCTTTGGGGAGCTGGAACAAGTTTTAGTGATTTTAACAAATTC CTAGGTGCCCTTGATAAAGGTGGGACAGGAGCGTTGGAATTGGTTGCCATGGATATGAAA GCGAGGGGGATGTATGTATGCCGAACCCTGAGTTACAAAGGGGCTGAGTTTGAGATTGTT GAAGCTCGTTTAGAAGCAGGAATGGAGGCAATGTACAATAAGTCTGCAGAATTTTGGGCA GAGCTACGGATAGAGTTGTTGTCAGCAAGTGCTTTTCTCCCTAACGAGAAACCAAATTCT AGTCAGTTGTGGAGATTATACTGGTCAAGCCACCAGCGTTTCTTTAGACACCTGTGTATG TCAGCTAAAGTCCCTGTAACTGTGAGGTTAGCTAAGAAAGCCTTGTCAACAAACAAGTGT GTAGTTATTGGCCTTCAGAGTACTGGAGAGGCTCGAACCGAAGAGGCTGTAAATAAATAT GGTCTTGAGCTTGATGATTTTGTCTCGGGACCTCGAGAGCTCTTGTTGAAATTTGTGGAA GAGAATTATCCCTTACCCGAGCAGCCTGAACCTCTGTCAGAGGATGATAGTGTTAAAGAA CTTCAGAGGAAGAGGCATTCAGCTTCACCTGGTGTTTCAATTAGAGGGAGAGTAAGAAAG ATGGCAAAGTGGAAACCAGATAGTGATAATGAAAGTGATTTGGAGTCTGAAGCTGACTCT GCTGACGATTCTAATGATTCTGATGATGAGTTCCAGATATGTCAGATATGCAGTGGGGAA GATGAAAGGAAGAAGTTGCTCCATTGTTCTGAATGTGACAAGCTTTTTCATCCGGACTGT GTGGTTCCTCCAGTTATAGACTTACCATCTGAAGCGTGGATTTGCTTTTCTTGTAAGGAA AAGACAGAGGAGTACATTCAAGCAAGACGTCTTTACATTGCCGAATTGCAGAAAAGGTAT GAAGCAGCGCTTGAACGAAAATCAAAGATCATAGAGATCATCCGTTCTCTGAATCTTCCA AACAATCCTTTGGATGACATCGTCGATCAGCTTGGAGGCCCTGAAAAAGTTGCAGAAATG ACGGGCAGGCGAGGTATGCTTGTAAGAGCATCGAATGGGAAAGGTGTTACATATCAAGCA AGAAACACAAAGGATATTACCATGGAAATGGTCAACATGCACGAGAAGCAACTATTTATG GATGGTAAAAAGTTGGTTGCCATTATTTCTGAAGCTGGGTCAGCTGGTGTTTCGTTGCAA GCAGATAGAAGGGCAGTAAATCAGAAAAGAAGGGTTCACTTGACTTTAGAGCTTCCCTGG AGTGCTGATCGTGCAATTCAGCAATTTGGAAGAACTCACCGGTCAAATCAGACATCTGCA CCTGAATATAGACTACTCTTCACTAATCTCGGTGGGGAACGCCGCTTTGCCTCTATTGTT GCAAAGAGACTAGAAACACTTGGTGCTTTAACACAGGGAGACCGCAGGGCTGGGCCCTCC GGGCCTTCTTTGAGTGCGTATAATTATGATAGTAACTTTGGTAAAAAATCCTTGATGGTG ATGTATCGAGGCATAATGGAGCAGGAGAAACTACCTGTTCTTCCTCCTGGATGCTCGATT GATGAACCCGAAACAGTTAAAGAGTTTTTGACCAAGGCAAGGGCTGCTCTTGTTGCGGTT GGAATTGTTAGGGACAGTGTTCTGGCCAATGGGAAAGATGTTGGAAGGTTTTCAGGACGT ATTATTGATTCTGACATGCATGATGTTGGACGATTTTTGAATCGCCTCTTAGGATTGCCA CCTGATATCCAGAATAGGCTGTTTGAATTGTTTACTAGTATATTAGACGTTCTTGTACAT AATGCTCGGATAGAAGGAAGTTTTGACTCAGGAATTGTGGATATGAAAGCTAATAGTGTT GAGCTACTGAGCACTCCAAAGACCGTCCATGTTGATCAAATGTCTGGTGCCTCAACTATG CTCTTTACTTTTACTCTAGATCGTGGTGTAACATGGGAGTCTGCGAGTTCAATGCTAGAG GGAAAGAGAAGGGACGGGCTTGGTTCAGCTAATGATGGCTTTTTTGAATCTAAAAGGGAA TGGTTAGGAAGACGGCACTTCATATTAGCATTTGAGAGTGCCGCTTCTGGGTTGTTTAAG ATTGTACGTCCTGCTGTAGGAGAGTCGATCAGGGAGATGTCTCTTTCAGAGTTGAAAACT AAATACCGAAAACTATCTTCTCTGGAGAAGGCTCGTACTGGTTGGGAGGACGAGTACGAA GTTTCATCAAAACAGTGTATGCATGGACCCAAGTGTAAGCTTGGGGAGTATTGCACGGTT GGACGTAGGATACAGGAAGTAAACGTTGTGGGTGGCCTTATTCTTCCCATCTGGGGAACC ATCGAGAAAGCTCTCTCCAAACAAGCCCGTCACAGCCACAAGAGAATTCGAGTTATACGC ATAGAGACTACGACGGATAATCAGCGGATAGTGGGCCTCTCCATCCCAAATGCAGCTGTA GAAACTGTTTTACAAGATTTAGCATGGGTTCAAGAGATTGATGATTAA

Peptide Sequence

PEP ID	AT1G79350.1
PEP Infomation	\| RING/FYVE/PHD zinc finger superfamily protein \| Chr1:29844829-29853215 REVERSE LENGTH=1295 \| 201606
Sequence	MTQSPVQPPPPLPAQPHSAAGGVIRGDVQVRCAGCRVILRVKTGVVEFSCPTCQLPQMLP PELLSRARPQFPQSPQQPPQPIQTLPPPIQQQLKPLNLPRPPVPAHGIDPTKMQLPCANC QAILNVPHGLTRFSCPQCHVELAVDVSKLNRSLTASQSHSNPPTPAAPTVPPPPPPEEVN EEAIEVEREEDEGGTAGETFMDYRPPKLSIGPPHPDPIVETSSLSAVQPPEPTYDLKIKE ELERSKALSCLQIETLVYACQRHLQHLADGTRAGFFVGDGAGVGKGRTIAGLIWENWKHG RRKALWISIGSDLKYDARRDLDDVGATCVGVNPLNKLPYSKLDSKNVGIKEGVVFLTYNS LIASSEKGRSRLQQLVQWCGPEFDGLLIFDECHKAKNLVPEAGSQPTRIGQAVVDIQDKI PQARVIYCSATGASEPRNMGYMVRLGLWGAGTSFSDFNKFLGALDKGGTGALELVAMDMK ARGMYVCRTLSYKGAEFEIVEARLEAGMEAMYNKSAEFWAELRIELLSASAFLPNEKPNS SQLWRLYWSSHQRFFRHLCMSAKVPVTVRLAKKALSTNKCVVIGLQSTGEARTEEAVNKY GLELDDFVSGPRELLLKFVEENYPLPEQPEPLSEDDSVKELQRKRHSASPGVSIRGRVRK MAKWKPDSDNESDLESEADSADDSNDSDDEFQICQICSGEDERKKLLHCSECDKLFHPDC VVPPVIDLPSEAWICFSCKEKTEEYIQARRLYIAELQKRYEAALERKSKIIEIIRSLNLP NNPLDDIVDQLGGPEKVAEMTGRRGMLVRASNGKGVTYQARNTKDITMEMVNMHEKQLFM DGKKLVAIISEAGSAGVSLQADRRAVNQKRRVHLTLELPWSADRAIQQFGRTHRSNQTSA PEYRLLFTNLGGERRFASIVAKRLETLGALTQGDRRAGPSGPSLSAYNYDSNFGKKSLMV MYRGIMEQEKLPVLPPGCSIDEPETVKEFLTKARAALVAVGIVRDSVLANGKDVGRFSGR IIDSDMHDVGRFLNRLLGLPPDIQNRLFELFTSILDVLVHNARIEGSFDSGIVDMKANSV ELLSTPKTVHVDQMSGASTMLFTFTLDRGVTWESASSMLEGKRRDGLGSANDGFFESKRE WLGRRHFILAFESAASGLFKIVRPAVGESIREMSLSELKTKYRKLSSLEKARTGWEDEYE VSSKQCMHGPKCKLGEYCTVGRRIQEVNVVGGLILPIWGTIEKALSKQARHSHKRIRVIR IETTTDNQRIVGLSIPNAAVETVLQDLAWVQEIDD

Transcript Sequence

Transcript ID	AT1G79350.1
Transcript Infomation	\| RING/FYVE/PHD zinc finger superfamily protein \| Chr1:29844621-29853466 REVERSE LENGTH=4347 \| 201606
Sequence	CTCCTCTTGGGTAATTATAATTAGTTTTAGATGAACCAAACAATCCCAAAATAATATTAG AAAAAGGGAAGAAAATCTGAAACCAAAAAAAACGAGAAGGGAGTCGAAGAAGAACCTTTC GCGCTCTGACGAAATTCATTACTTACACTGGATTTATACTTTTTTTGTCTTCCTCTCTCA ATTATCTCCTTCAACGCCACAAGATCCTAAGGCCTCTCACGGATCTCTCTTAAGATCAAT CGCCGCGGCTCATGACGCAGTCGCCTGTTCAACCGCCTCCGCCGCTCCCAGCTCAGCCGC ATTCCGCCGCCGGAGGTGTAATAAGAGGCGATGTACAGGTTAGGTGCGCAGGCTGTCGCG TGATTCTGAGGGTGAAAACCGGCGTTGTGGAGTTCTCGTGTCCGACTTGTCAACTTCCCC AAATGTTGCCGCCGGAGCTTCTTTCTAGGGCACGGCCGCAGTTTCCGCAGTCTCCACAAC AACCACCACAGCCAATTCAGACGCTTCCGCCACCGATTCAACAGCAGCTTAAGCCTCTTA ATCTACCTAGGCCTCCGGTTCCGGCACATGGAATCGATCCGACGAAGATGCAATTGCCTT GCGCTAACTGTCAGGCTATCCTCAATGTGCCTCATGGACTCACTCGGTTCTCGTGTCCTC AGTGCCATGTCGAGCTCGCTGTTGATGTCTCCAAGCTTAATCGGTCTTTAACTGCTTCTC AATCTCATTCTAATCCTCCTACTCCTGCTGCTCCCACAGTCCCGCCTCCGCCTCCTCCCG AAGAAGTCAATGAGGAAGCTATTGAAGTGGAGAGAGAAGAAGATGAAGGTGGAACGGCTG GAGAAACGTTTATGGATTATCGTCCCCCAAAACTTTCGATCGGACCTCCTCATCCTGATC CAATTGTGGAAACATCATCTCTATCTGCAGTGCAACCCCCAGAGCCTACTTATGATCTCA AAATCAAGGAAGAGCTTGAAAGGTCAAAGGCTTTATCGTGTTTGCAGATTGAGACATTAG TTTACGCTTGCCAGAGGCATCTCCAGCACCTTGCTGATGGTACCAGAGCAGGCTTTTTTG TTGGAGATGGTGCTGGTGTGGGCAAAGGGCGAACAATTGCCGGGTTGATTTGGGAAAATT GGAAACATGGAAGGAGGAAAGCTTTGTGGATTTCTATTGGCTCAGACTTGAAATATGATG CAAGAAGGGACTTGGATGATGTGGGTGCTACATGCGTTGGAGTGAATCCTTTGAACAAGC TACCCTATTCTAAGCTTGACTCGAAAAATGTTGGTATTAAAGAAGGAGTGGTATTCTTGA CATACAATAGCCTCATTGCTTCCTCTGAGAAGGGCCGTTCTCGTTTACAGCAGCTTGTTC AATGGTGTGGACCAGAATTTGATGGTCTCTTGATCTTTGATGAGTGCCATAAAGCGAAAA ATTTGGTACCTGAAGCTGGGAGTCAGCCGACACGCATCGGACAGGCAGTTGTTGACATTC AGGATAAGATCCCCCAAGCACGTGTTATTTATTGCTCGGCTACTGGGGCATCAGAACCAC GAAACATGGGTTATATGGTCAGGCTTGGTCTTTGGGGAGCTGGAACAAGTTTTAGTGATT TTAACAAATTCCTAGGTGCCCTTGATAAAGGTGGGACAGGAGCGTTGGAATTGGTTGCCA TGGATATGAAAGCGAGGGGGATGTATGTATGCCGAACCCTGAGTTACAAAGGGGCTGAGT TTGAGATTGTTGAAGCTCGTTTAGAAGCAGGAATGGAGGCAATGTACAATAAGTCTGCAG AATTTTGGGCAGAGCTACGGATAGAGTTGTTGTCAGCAAGTGCTTTTCTCCCTAACGAGA AACCAAATTCTAGTCAGTTGTGGAGATTATACTGGTCAAGCCACCAGCGTTTCTTTAGAC ACCTGTGTATGTCAGCTAAAGTCCCTGTAACTGTGAGGTTAGCTAAGAAAGCCTTGTCAA CAAACAAGTGTGTAGTTATTGGCCTTCAGAGTACTGGAGAGGCTCGAACCGAAGAGGCTG TAAATAAATATGGTCTTGAGCTTGATGATTTTGTCTCGGGACCTCGAGAGCTCTTGTTGA AATTTGTGGAAGAGAATTATCCCTTACCCGAGCAGCCTGAACCTCTGTCAGAGGATGATA GTGTTAAAGAACTTCAGAGGAAGAGGCATTCAGCTTCACCTGGTGTTTCAATTAGAGGGA GAGTAAGAAAGATGGCAAAGTGGAAACCAGATAGTGATAATGAAAGTGATTTGGAGTCTG AAGCTGACTCTGCTGACGATTCTAATGATTCTGATGATGAGTTCCAGATATGTCAGATAT GCAGTGGGGAAGATGAAAGGAAGAAGTTGCTCCATTGTTCTGAATGTGACAAGCTTTTTC ATCCGGACTGTGTGGTTCCTCCAGTTATAGACTTACCATCTGAAGCGTGGATTTGCTTTT CTTGTAAGGAAAAGACAGAGGAGTACATTCAAGCAAGACGTCTTTACATTGCCGAATTGC AGAAAAGGTATGAAGCAGCGCTTGAACGAAAATCAAAGATCATAGAGATCATCCGTTCTC TGAATCTTCCAAACAATCCTTTGGATGACATCGTCGATCAGCTTGGAGGCCCTGAAAAAG TTGCAGAAATGACGGGCAGGCGAGGTATGCTTGTAAGAGCATCGAATGGGAAAGGTGTTA CATATCAAGCAAGAAACACAAAGGATATTACCATGGAAATGGTCAACATGCACGAGAAGC AACTATTTATGGATGGTAAAAAGTTGGTTGCCATTATTTCTGAAGCTGGGTCAGCTGGTG TTTCGTTGCAAGCAGATAGAAGGGCAGTAAATCAGAAAAGAAGGGTTCACTTGACTTTAG AGCTTCCCTGGAGTGCTGATCGTGCAATTCAGCAATTTGGAAGAACTCACCGGTCAAATC AGACATCTGCACCTGAATATAGACTACTCTTCACTAATCTCGGTGGGGAACGCCGCTTTG CCTCTATTGTTGCAAAGAGACTAGAAACACTTGGTGCTTTAACACAGGGAGACCGCAGGG CTGGGCCCTCCGGGCCTTCTTTGAGTGCGTATAATTATGATAGTAACTTTGGTAAAAAAT CCTTGATGGTGATGTATCGAGGCATAATGGAGCAGGAGAAACTACCTGTTCTTCCTCCTG GATGCTCGATTGATGAACCCGAAACAGTTAAAGAGTTTTTGACCAAGGCAAGGGCTGCTC TTGTTGCGGTTGGAATTGTTAGGGACAGTGTTCTGGCCAATGGGAAAGATGTTGGAAGGT TTTCAGGACGTATTATTGATTCTGACATGCATGATGTTGGACGATTTTTGAATCGCCTCT TAGGATTGCCACCTGATATCCAGAATAGGCTGTTTGAATTGTTTACTAGTATATTAGACG TTCTTGTACATAATGCTCGGATAGAAGGAAGTTTTGACTCAGGAATTGTGGATATGAAAG CTAATAGTGTTGAGCTACTGAGCACTCCAAAGACCGTCCATGTTGATCAAATGTCTGGTG CCTCAACTATGCTCTTTACTTTTACTCTAGATCGTGGTGTAACATGGGAGTCTGCGAGTT CAATGCTAGAGGGAAAGAGAAGGGACGGGCTTGGTTCAGCTAATGATGGCTTTTTTGAAT CTAAAAGGGAATGGTTAGGAAGACGGCACTTCATATTAGCATTTGAGAGTGCCGCTTCTG GGTTGTTTAAGATTGTACGTCCTGCTGTAGGAGAGTCGATCAGGGAGATGTCTCTTTCAG AGTTGAAAACTAAATACCGAAAACTATCTTCTCTGGAGAAGGCTCGTACTGGTTGGGAGG ACGAGTACGAAGTTTCATCAAAACAGTGTATGCATGGACCCAAGTGTAAGCTTGGGGAGT ATTGCACGGTTGGACGTAGGATACAGGAAGTAAACGTTGTGGGTGGCCTTATTCTTCCCA TCTGGGGAACCATCGAGAAAGCTCTCTCCAAACAAGCCCGTCACAGCCACAAGAGAATTC GAGTTATACGCATAGAGACTACGACGGATAATCAGCGGATAGTGGGCCTCTCCATCCCAA ATGCAGCTGTAGAAACTGTTTTACAAGATTTAGCATGGGTTCAAGAGATTGATGATTAAG ACAACGAGTATTTATAAGAAGCATACACCCTCAAAGCTCCACAATCAAGTTCCCATGCCT ATTTTGTATTTTCTTTATTTAAGAAAAAGAGGAAAAAGACACTTGACTTTCATTTTTGTG TATATCACATGACAAATTGGCAAGATGATACATAGATGTAATATTATTTATCTAACAAGA TTCATTCTTATGTTCCGTTAAAAAAAA