Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G78980.1
CDS Infomation	\| STRUBBELIG-receptor family 5 \| Chr1:29707923-29711266 REVERSE LENGTH=2100 \| 201606
Sequence	ATGACGCAGAAGCTCGTACGCCTTGTGATCGTCTCTCTGGCTATTACTGTCACTTTACTT CAAGCAAAAACCGATAACCAAGAAGTCTCCGCGTTGAACGTAATGTTCACGAGCTTAAAT TCGCCGTCGAAACTCAAAGGTTGGAAAGCTAACGGAGGTGATCCCTGCGAAGATTCTTGG GAAGGCGTCAAATGCAAAGGCTCTTCGGTCACTGAATTACAGTTATCAGGCTTTGAGCTA GGTGGATCTCGCGGTTATCTACTAAGCAACCTCAAATCTCTCACAACTTTTGATCTCAGC AAAAACAATCTCAAAGGAAACATACCTTATCAACTCCCACCCAACATTGCCAATCTAGAC TTTTCTGAAAACGAACTCGATGGAAACGTGCCCTACTCGTTATCTCAAATGAAAAATCTC CAAAGCATTAATCTTGGACAAAACAAGCTCAATGGAGAACTACCAGATATGTTTCAGAAA CTGTCCAAACTCGAAACTCTGGACTTTTCGTTGAATAAACTCTCTGGGAAATTACCTCAG AGTTTTGCTAATCTCACAAGCCTCAAAAAACTACACTTGCAGGATAATCGATTCACAGGC GACATAAACGTTCTCAGGAACCTTGCCATCGATGACTTGAACGTCGAAGACAACCAGTTT GAAGGATGGATACCTAATGAGCTTAAGGACATAGACAGTTTACTGACTGGAGGTAACGAC TGGTCAACTGAAACTGCTCCACCACCACCACCGGGTGTTAAATATGGCCGAAAATCTTCG GGTTCGAAAGACGGAGGAGGTATAACCGCCGGAACTGGAATGGTGATCGCTGGAGCATGT TTAGGCGTTCTTGTGTTGATCATTGTTTTAATTGCGCTCGTTTCCAAGAAAAAATCATCT CTCTCACCTCATTTCATCGACGAAGATAACAGTCATCACACCCCAAAGTTCAAATCTCTC ACCTCGCATGGATCTGCGCAAGAGCTTCGTGTTGATTTCGGCAACGATTACAAAGATGGG AAATCTGGAGATTCGGGTGATGAAAATATCCATAGGATAGGATCAAAGGGACTAAAACAT TATGTTTCGTCGCGTGTGATGTCTTTCACTGATACCGAATTTGCGAACAAGCTCAATGCA AAACGAACCACTTCAACTCGTTCCGCTGTGGAATTCGAGCTCTCTGATTTGCAAAGCGCA ACAGCCAATTTCTCACCTGGAAATCTACTAGGGGAAGGCTCAATCGGACGTGTTTACAGA GCCAAATATTCCGACGGACGTACTTTGGCGGTTAAGAAGATCGATTCAACGTTGTTTGAT TCGGGTAAATCAGAAGGAATAACGCCGATTGTAATGAGCCTCTCAAAGATTAGGCATCAA AATATAGCAGAGCTCGTAGGCTATTGCTCAGAGCAAGGTCACAACATGTTAGTCTACGAA TACTTCAGGAATGGCTCACTCCATGAGTTCCTTCATTTGTCAGATTGCTTCAGTAAACCC TTGACTTGGAACACAAGAGTCAGAATCGCCTTGGGAACCGCTCGAGCCGTTGAGTACCTG CACGAGGCATGTTCACCTTCTGTGATGCATAAGAATATCAAGTCTTCTAACATTTTGCTA GACGCAGATCTCAACCCTCGTCTCTCAGATTACGGCCTCTCAAAATTCTACCTTAGAACG AGTCAAAATCTAGGAGAAGGATACAATGCACCAGAAGCCAGGGACCCTTCTGCTTATACA CCAAAGAGTGACGTCTACAGCTTTGGCGTCGTCATGTTAGAGCTTCTCACCGGTCGAGTT CCATTTGACGGAGAGAAGCCAAGGCCGGAGAGATCGTTGGTACGGTGGGCGACACCACAA CTTCACGACATAGATGCATTGTCGAATATAGCGGATCCAGCTCTGCACGGACTTTACCCA CCAAAATCATTGTCAAGATTCGCCGACATTATCGCATTATGTGTTCAGGTGGAACCGGAG TTCCGACCACCGATGTCAGAAGTTGTGGAGGCGCTTGTACGGATGGTTCAACGGTCAAGT ATGAAGCTTAAAGATGATCTTTCATCGTCTTATCGAGCCCACGACGATTATGATTACTAG

Peptide Sequence

PEP ID	AT1G78980.1
PEP Infomation	\| STRUBBELIG-receptor family 5 \| Chr1:29707923-29711266 REVERSE LENGTH=699 \| 201606
Sequence	MTQKLVRLVIVSLAITVTLLQAKTDNQEVSALNVMFTSLNSPSKLKGWKANGGDPCEDSW EGVKCKGSSVTELQLSGFELGGSRGYLLSNLKSLTTFDLSKNNLKGNIPYQLPPNIANLD FSENELDGNVPYSLSQMKNLQSINLGQNKLNGELPDMFQKLSKLETLDFSLNKLSGKLPQ SFANLTSLKKLHLQDNRFTGDINVLRNLAIDDLNVEDNQFEGWIPNELKDIDSLLTGGND WSTETAPPPPPGVKYGRKSSGSKDGGGITAGTGMVIAGACLGVLVLIIVLIALVSKKKSS LSPHFIDEDNSHHTPKFKSLTSHGSAQELRVDFGNDYKDGKSGDSGDENIHRIGSKGLKH YVSSRVMSFTDTEFANKLNAKRTTSTRSAVEFELSDLQSATANFSPGNLLGEGSIGRVYR AKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYE YFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILL DADLNPRLSDYGLSKFYLRTSQNLGEGYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRV PFDGEKPRPERSLVRWATPQLHDIDALSNIADPALHGLYPPKSLSRFADIIALCVQVEPE FRPPMSEVVEALVRMVQRSSMKLKDDLSSSYRAHDDYDY

Transcript Sequence

Transcript ID	AT1G78980.1
Transcript Infomation	\| STRUBBELIG-receptor family 5 \| Chr1:29707625-29711421 REVERSE LENGTH=2553 \| 201606
Sequence	TGGTCATTCTTGTCCAAACCTCAACAATGTCTCTATCCCTAAATCCAATCACAATGGCAC ATTATCTCAAACCCTCGTCGTCTTGTCCGTGAAGCAAACCAAAAAGCACAACACTAACTT TGGAAACCCATTTTCTATCTTTCTTGCAAATCAAGATGACGCAGAAGCTCGTACGCCTTG TGATCGTCTCTCTGGCTATTACTGTCACTTTACTTCAAGCAAAAACCGATAACCAAGAAG TCTCCGCGTTGAACGTAATGTTCACGAGCTTAAATTCGCCGTCGAAACTCAAAGGTTGGA AAGCTAACGGAGGTGATCCCTGCGAAGATTCTTGGGAAGGCGTCAAATGCAAAGGCTCTT CGGTCACTGAATTACAGTTATCAGGCTTTGAGCTAGGTGGATCTCGCGGTTATCTACTAA GCAACCTCAAATCTCTCACAACTTTTGATCTCAGCAAAAACAATCTCAAAGGAAACATAC CTTATCAACTCCCACCCAACATTGCCAATCTAGACTTTTCTGAAAACGAACTCGATGGAA ACGTGCCCTACTCGTTATCTCAAATGAAAAATCTCCAAAGCATTAATCTTGGACAAAACA AGCTCAATGGAGAACTACCAGATATGTTTCAGAAACTGTCCAAACTCGAAACTCTGGACT TTTCGTTGAATAAACTCTCTGGGAAATTACCTCAGAGTTTTGCTAATCTCACAAGCCTCA AAAAACTACACTTGCAGGATAATCGATTCACAGGCGACATAAACGTTCTCAGGAACCTTG CCATCGATGACTTGAACGTCGAAGACAACCAGTTTGAAGGATGGATACCTAATGAGCTTA AGGACATAGACAGTTTACTGACTGGAGGTAACGACTGGTCAACTGAAACTGCTCCACCAC CACCACCGGGTGTTAAATATGGCCGAAAATCTTCGGGTTCGAAAGACGGAGGAGGTATAA CCGCCGGAACTGGAATGGTGATCGCTGGAGCATGTTTAGGCGTTCTTGTGTTGATCATTG TTTTAATTGCGCTCGTTTCCAAGAAAAAATCATCTCTCTCACCTCATTTCATCGACGAAG ATAACAGTCATCACACCCCAAAGTTCAAATCTCTCACCTCGCATGGATCTGCGCAAGAGC TTCGTGTTGATTTCGGCAACGATTACAAAGATGGGAAATCTGGAGATTCGGGTGATGAAA ATATCCATAGGATAGGATCAAAGGGACTAAAACATTATGTTTCGTCGCGTGTGATGTCTT TCACTGATACCGAATTTGCGAACAAGCTCAATGCAAAACGAACCACTTCAACTCGTTCCG CTGTGGAATTCGAGCTCTCTGATTTGCAAAGCGCAACAGCCAATTTCTCACCTGGAAATC TACTAGGGGAAGGCTCAATCGGACGTGTTTACAGAGCCAAATATTCCGACGGACGTACTT TGGCGGTTAAGAAGATCGATTCAACGTTGTTTGATTCGGGTAAATCAGAAGGAATAACGC CGATTGTAATGAGCCTCTCAAAGATTAGGCATCAAAATATAGCAGAGCTCGTAGGCTATT GCTCAGAGCAAGGTCACAACATGTTAGTCTACGAATACTTCAGGAATGGCTCACTCCATG AGTTCCTTCATTTGTCAGATTGCTTCAGTAAACCCTTGACTTGGAACACAAGAGTCAGAA TCGCCTTGGGAACCGCTCGAGCCGTTGAGTACCTGCACGAGGCATGTTCACCTTCTGTGA TGCATAAGAATATCAAGTCTTCTAACATTTTGCTAGACGCAGATCTCAACCCTCGTCTCT CAGATTACGGCCTCTCAAAATTCTACCTTAGAACGAGTCAAAATCTAGGAGAAGGATACA ATGCACCAGAAGCCAGGGACCCTTCTGCTTATACACCAAAGAGTGACGTCTACAGCTTTG GCGTCGTCATGTTAGAGCTTCTCACCGGTCGAGTTCCATTTGACGGAGAGAAGCCAAGGC CGGAGAGATCGTTGGTACGGTGGGCGACACCACAACTTCACGACATAGATGCATTGTCGA ATATAGCGGATCCAGCTCTGCACGGACTTTACCCACCAAAATCATTGTCAAGATTCGCCG ACATTATCGCATTATGTGTTCAGGTGGAACCGGAGTTCCGACCACCGATGTCAGAAGTTG TGGAGGCGCTTGTACGGATGGTTCAACGGTCAAGTATGAAGCTTAAAGATGATCTTTCAT CGTCTTATCGAGCCCACGACGATTATGATTACTAGAGTTAAGAAGAAAGAGTAGTGACAT TATATATTTATAAGACAAGATATATAGTTAATAATTTTCTTGACACAAAACAAGAGAAGA CTAAATCATTATTTATTCATTCAAATATTTTTGTGTTCATCTTTTAATATTCGGTGTATT CCGTCGCTGGAAAAACATTCATCTCATTTAAAAAGAAAAAAATTACATAAATAAGTAAAT GATTAATTAACGATAAACACAACTTTTCGGTATTCTGCGAGTGCCCATAATGGGAAGGTG TTTCTGTATGTAGCATAGTGTAGCATGCATGTA