Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G78815.1
CDS Infomation	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) \| Chr1:29632054-29632641 REVERSE LENGTH=588 \| 201606
Sequence	ATGGCTAGTCATAGCAACAAAGGCAAAGGCATAGCAGAAGGATCGTCTCAACCGCAATCG CAACCGCAACCACAACCACACCAACCGCAATCACCTCCTAACCCGCCAGCGTTAAGCCGG TACGAGTCACAGAAACGACGAGACTGGAACACGTTTTGTCAATACCTGCGTAACCAACAG CCACCGGTTCACATCTCGCAGTGTGGATCAAACCACATCCTCGATTTCCTCCAATATCTC GACCAGTTTGGGAAGACAAAGGTTCATATCCATGGATGCGTTTTCTTCGGACAGGTTGAG CCAGCGGGACAGTGTAACTGTCCTTTAAAACAAGCGTGGGGGAGTTTAGATGCTTTGATC GGACGGCTAAGAGCGGCTTTCGAGGAGAACGGAGGATTGCCGGAGAGAAACCCTTTTGCC GGCGGCGGAATTAGGGTTTTTCTGAGGGAAGTGAGAGATTCACAGGCGAAGGCAAGAGGA GTTCCGTACAAGAAAAGAAAAAAGAGGAAGAAGAGGAATCCTATGAAGAGTCATGATGGT GAAGATGGTACTACGGGAACTAGTAGTAGCTCCAACTTGGCTTCTTAG

Peptide Sequence

PEP ID	AT1G78815.1
PEP Infomation	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) \| Chr1:29632054-29632641 REVERSE LENGTH=195 \| 201606
Sequence	MASHSNKGKGIAEGSSQPQSQPQPQPHQPQSPPNPPALSRYESQKRRDWNTFCQYLRNQQ PPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVFFGQVEPAGQCNCPLKQAWGSLDALI GRLRAAFEENGGLPERNPFAGGGIRVFLREVRDSQAKARGVPYKKRKKRKKRNPMKSHDG EDGTTGTSSSSNLAS

Transcript Sequence

Transcript ID	AT1G78815.1
Transcript Infomation	\| LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) \| Chr1:29631743-29632791 REVERSE LENGTH=1003 \| 201606
Sequence	AAGACCAAAAGAAAAAAAAAAACTTTTTCTTTTCTGATGAATCGTATCTATTAGCTATGA GCCTGAGGTGATGATCATGTCAACATAACCATCAACGTTCTACCATGGCTAGTCATAGCA ACAAAGGCAAAGGCATAGCAGAAGGATCGTCTCAACCGCAATCGCAACCGCAACCACAAC CACACCAACCGCAATCACCTCCTAACCCGCCAGCGTTAAGCCGGTACGAGTCACAGAAAC GACGAGACTGGAACACGTTTTGTCAATACCTGCGTAACCAACAGCCACCGGTTCACATCT CGCAGTGTGGATCAAACCACATCCTCGATTTCCTCCAATATCTCGACCAGTTTGGGAAGA CAAAGGTTCATATCCATGGATGCGTTTTCTTCGGACAGGTTGAGCCAGCGGGACAGTGTA ACTGTCCTTTAAAACAAGCGTGGGGGAGTTTAGATGCTTTGATCGGACGGCTAAGAGCGG CTTTCGAGGAGAACGGAGGATTGCCGGAGAGAAACCCTTTTGCCGGCGGCGGAATTAGGG TTTTTCTGAGGGAAGTGAGAGATTCACAGGCGAAGGCAAGAGGAGTTCCGTACAAGAAAA GAAAAAAGAGGAAGAAGAGGAATCCTATGAAGAGTCATGATGGTGAAGATGGTACTACGG GAACTAGTAGTAGCTCCAACTTGGCTTCTTAGCGGAAGCAAACAAAAAATCTATAATAAA ACAAAGTGGAATTAGTTAATGGTAAGCATTTAATACTCTCCATAATCTCTATTAATTTTC AGTACTTTAATCCTATTTTGTGATCTATTTACAATTTTACATATAGAGTGAAAAGAAACA ATTCTACATTCGTTTCTTGATAGTCAGCTCTTAATGCATAGTTGAATTTTATACGTATCA TACCCAAACTATAAGATTAATCTTGATCTTAGATCATATACATATATCATCATGGTGTGT ACCCTAAGTTTCATAATCATTTTTCTTAACTATTTATGTGGAT