Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G78610.1
CDS Infomation	\| mechanosensitive channel of small conductance-like 6 \| Chr1:29569226-29572126 REVERSE LENGTH=2571 \| 201606
Sequence	ATGGCCGTTGATGCGGCTGACCGGCGAGAAGTTATCGTCAAAATCGACGGTGAAAACGGA AACAACAATGGAGTCTCCGGAGAGACTGTAGGAAAGATATGGAGAGACGGAAGCTACGAT TTTTGGACTGATGGTGAAGGTAACCTCAACAAAGGTCATAATGCTGCGGCGGTTGATTCT GATAGATCCGCCGCCACGACGGGGGAGCAACAAAAAGATGAGGGTTTTGAGTTTCGTCGC GGCGAAGATCCTCCCACGAAGCTGATTGGTCAGTTTCTCCATAAACAGCAAGCTTCCGGT GAGATTTGTTTAGATATGGACTTAGGTATGGACGAGCTTCAATCTAGAGGTTTAACTCCG GTATCGGAATCTCCGAGAGTTTCTACAAAACGTGACCCCGTGGGAAGACGAGACAGTCGC AGTAATACCAACAATAACGATGATGGAGAAGTTGTCAAGTGTAGTGGTAATAATGCTCCG ATTCAGAGAAGCTCTAGCACTTTACTTAAGATGAGAACTAGGTCACGTCTTTCGGATCCG CCAACGCCTCAGTTGCCGCCGCAAACGGCGGATATGAAGTCGGGTCGGATTCCGAAATCC GGGCAGATGAAATCAGGTTTTTTTGGAAAAAGCCCTAAGACTCAAGGTGAGGAAGAAGAA GATGATCCATTTGCAGCAGAGGATTTACCAGAAGAGTATAGGAAAGATAAACTTAGTCTA TGGATTGTGTTGGAATGGTTGAGTTTGATTTTGATTATAGCTGGGTTTGTTTGCACTCTT GCGATACCTTCCTTGCGTAAGAAGAAACTCTGGGAACTTCAGCTATGGAAATGGGAGTCA ATGGTTTTAGTGTTGATCTGTGGTAGGTTAGTCTCGAGCTGGATTGTGAAGATTGTTGTC TTCTTTATCGAAAGGAACTTTCTTTTGAGGAAAAGAGTTTTGTATTTCGTTTATGGTGTC CGAAAAGCGGTGCAGAATTGCTTATGGTTAGGACTTGTTTTACTGGCTTGGCATTTCTTG TTTGATGAGAAAGTGGCTAAAGCAGCAAACACTAAGGCGCTTCGTGTTGTGACTAAGATC TTTGTGTGTTTGTTGGTTGGGTTCTTGTTGTGGCTCGTGAAGACACTGTTGGTCAAAGTT CTTGCTTCATCGTTTCATATGAGCACTTACTTCGATAGGATTCAAGAGTCTTTGTTTACT CAGTATGTGATTGAGACGCTCTCGGGTCCTCCTTTGATTGAGATCCAAAAAAATGAGGAA GAGGAAGAGAGAATCAGTGTTGAGGTTAAGAAGTTTCAAAATCCAGGGGGTGTTGAGATT CAGTCAGGAGCTCAGAAAAGTCCAATGAAGACCGGGAAAAGCCCGTTTCTCTCTCATGTT CTATCTAATGGAGGAGGGGGAGGAGGAGAAAACAAAGGGATTACGATCGATAGCCTTCAT AAGCTGAATCCTAAGAATGTTTCCGCATGGAAAATGAAGAGGCTGATGAATATAATCCGG AATGGATCACTTACCACTTTGGATGAACAGCTTCAGGATCCAAGCTTGGATGATGATAAA GGAAACCAAATTAGAAGTGAGTTTGAGGCAAAGCTCGCTGCAAGAAAGATCTTTCATAAT GTTGCTAAGCCAGGATCAAAGTTCATCTATGCAAACGACATAATGCGGTTTCTGCCAGAT GACGAAGCTTTGAAGACTTTAAGTCTCTTTGAAGGAGCATCTGAGACGAACAGGATCAGC AAGTCATCTCTTAAAAACTGGGTGGTGAATGCTTTTAGAGAGAGAAGAGCTCTTGCATTG ACCCTAAACGACACCAAAACAGCAGTAAACAGGCTTCACAAGATGGTGAATATCGTGGTT GGGATCATCATACTTGTTATCTGGCTTATCATACTTGGAATCACTTCCACCAAATTCCTC GTCGTCATGAGCTCGCAAGTCGTGGTTGTAGCATTCATATTTGGAAACATGTGCAAGATA GTATTTGAATCTATCATCTACTTGTTTGTGATACATCCGTTTGATGTAGGCGATCGATGT GAAATTGATGGAGTCCAGATGGTTGTGGAAGAGATGAACATATTGACAACAGTTTTCTTG AGATTTGATAACCAGAAAGTCGTGTACCCGAACAGTCTTCTCTGGACTAAATCCATCGGA AATTATTACCGTAGTCCTGATATGGGAGATGGTATCGAATTCTCCATCCACATTACTACT CCAGCTGAGAAAATCATACTCATCAAACAGAGAATCACAAGTTACATTGAGGGCAAGAAG GATCATTGGTATCCAGCGCCAATGATAGTATTCAAAGACATGGAGTCATTAAACAGCGTG AGAATTGCGGTTTGGCCAACACATCGAATGAATCATCAAGATATGGGAGAGAAATGGGCT CGAAGGTCTCAACTTGTTGAAGAGATTGCCAAAATTTGCAGAGAGCTTGACATTGAGTAT AGATTGTATCCTCTTGATATCAATGTCCGAAACTTGCCCACTTCTACGGCTTTGCCTGTT TCCGACCGTCTTCCACCAAACTGGAGTGCTCCAGCTTCTGGCAGCAACTGA

Peptide Sequence

PEP ID	AT1G78610.1
PEP Infomation	\| mechanosensitive channel of small conductance-like 6 \| Chr1:29569226-29572126 REVERSE LENGTH=856 \| 201606
Sequence	MAVDAADRREVIVKIDGENGNNNGVSGETVGKIWRDGSYDFWTDGEGNLNKGHNAAAVDS DRSAATTGEQQKDEGFEFRRGEDPPTKLIGQFLHKQQASGEICLDMDLGMDELQSRGLTP VSESPRVSTKRDPVGRRDSRSNTNNNDDGEVVKCSGNNAPIQRSSSTLLKMRTRSRLSDP PTPQLPPQTADMKSGRIPKSGQMKSGFFGKSPKTQGEEEEDDPFAAEDLPEEYRKDKLSL WIVLEWLSLILIIAGFVCTLAIPSLRKKKLWELQLWKWESMVLVLICGRLVSSWIVKIVV FFIERNFLLRKRVLYFVYGVRKAVQNCLWLGLVLLAWHFLFDEKVAKAANTKALRVVTKI FVCLLVGFLLWLVKTLLVKVLASSFHMSTYFDRIQESLFTQYVIETLSGPPLIEIQKNEE EEERISVEVKKFQNPGGVEIQSGAQKSPMKTGKSPFLSHVLSNGGGGGGENKGITIDSLH KLNPKNVSAWKMKRLMNIIRNGSLTTLDEQLQDPSLDDDKGNQIRSEFEAKLAARKIFHN VAKPGSKFIYANDIMRFLPDDEALKTLSLFEGASETNRISKSSLKNWVVNAFRERRALAL TLNDTKTAVNRLHKMVNIVVGIIILVIWLIILGITSTKFLVVMSSQVVVVAFIFGNMCKI VFESIIYLFVIHPFDVGDRCEIDGVQMVVEEMNILTTVFLRFDNQKVVYPNSLLWTKSIG NYYRSPDMGDGIEFSIHITTPAEKIILIKQRITSYIEGKKDHWYPAPMIVFKDMESLNSV RIAVWPTHRMNHQDMGEKWARRSQLVEEIAKICRELDIEYRLYPLDINVRNLPTSTALPV SDRLPPNWSAPASGSN

Transcript Sequence

Transcript ID	AT1G78610.1
Transcript Infomation	\| mechanosensitive channel of small conductance-like 6 \| Chr1:29568961-29572572 REVERSE LENGTH=3282 \| 201606
Sequence	CAAAATGTATACTAAACAAATATTAGTTTGCCAAAGTTTGACGAAATAATAAAAACCTAA ATGGTTCGCCGTGAGTAAGTTCCCATCTTCTTCTCGAACTTTGCCAAAGTTTGGTATTGA AAAAATAATAATATTAAGACACAGAGAGAGAGAGGGAGAAGAGGATCTCTGTGTGTCGTC CAAATTTCAAAGTGATGATGTTGTAGCTGTGTGGTAGCGATTGGCTTACACGCGTCATAC TTTAATTAGATAATTTTATTTCCTTATTACTTACCCTCTCTTTTCTCACAAAGAGTCATC ACCAGCTCTGATCAAATAAAAGCGTTTTCTCTTCTTCTTGCTTTCACAGTTACCCAAAAG TGTGATTAAATCTTTCTTTTTTTTGCTTTCCTTCTCTAATCGTTGGTGTGTACGCTAAAC CTAGATTTCGCTGGATTGTTTGAGTAATGGCCGTTGATGCGGCTGACCGGCGAGAAGTTA TCGTCAAAATCGACGGTGAAAACGGAAACAACAATGGAGTCTCCGGAGAGACTGTAGGAA AGATATGGAGAGACGGAAGCTACGATTTTTGGACTGATGGTGAAGGTAACCTCAACAAAG GTCATAATGCTGCGGCGGTTGATTCTGATAGATCCGCCGCCACGACGGGGGAGCAACAAA AAGATGAGGGTTTTGAGTTTCGTCGCGGCGAAGATCCTCCCACGAAGCTGATTGGTCAGT TTCTCCATAAACAGCAAGCTTCCGGTGAGATTTGTTTAGATATGGACTTAGGTATGGACG AGCTTCAATCTAGAGGTTTAACTCCGGTATCGGAATCTCCGAGAGTTTCTACAAAACGTG ACCCCGTGGGAAGACGAGACAGTCGCAGTAATACCAACAATAACGATGATGGAGAAGTTG TCAAGTGTAGTGGTAATAATGCTCCGATTCAGAGAAGCTCTAGCACTTTACTTAAGATGA GAACTAGGTCACGTCTTTCGGATCCGCCAACGCCTCAGTTGCCGCCGCAAACGGCGGATA TGAAGTCGGGTCGGATTCCGAAATCCGGGCAGATGAAATCAGGTTTTTTTGGAAAAAGCC CTAAGACTCAAGGTGAGGAAGAAGAAGATGATCCATTTGCAGCAGAGGATTTACCAGAAG AGTATAGGAAAGATAAACTTAGTCTATGGATTGTGTTGGAATGGTTGAGTTTGATTTTGA TTATAGCTGGGTTTGTTTGCACTCTTGCGATACCTTCCTTGCGTAAGAAGAAACTCTGGG AACTTCAGCTATGGAAATGGGAGTCAATGGTTTTAGTGTTGATCTGTGGTAGGTTAGTCT CGAGCTGGATTGTGAAGATTGTTGTCTTCTTTATCGAAAGGAACTTTCTTTTGAGGAAAA GAGTTTTGTATTTCGTTTATGGTGTCCGAAAAGCGGTGCAGAATTGCTTATGGTTAGGAC TTGTTTTACTGGCTTGGCATTTCTTGTTTGATGAGAAAGTGGCTAAAGCAGCAAACACTA AGGCGCTTCGTGTTGTGACTAAGATCTTTGTGTGTTTGTTGGTTGGGTTCTTGTTGTGGC TCGTGAAGACACTGTTGGTCAAAGTTCTTGCTTCATCGTTTCATATGAGCACTTACTTCG ATAGGATTCAAGAGTCTTTGTTTACTCAGTATGTGATTGAGACGCTCTCGGGTCCTCCTT TGATTGAGATCCAAAAAAATGAGGAAGAGGAAGAGAGAATCAGTGTTGAGGTTAAGAAGT TTCAAAATCCAGGGGGTGTTGAGATTCAGTCAGGAGCTCAGAAAAGTCCAATGAAGACCG GGAAAAGCCCGTTTCTCTCTCATGTTCTATCTAATGGAGGAGGGGGAGGAGGAGAAAACA AAGGGATTACGATCGATAGCCTTCATAAGCTGAATCCTAAGAATGTTTCCGCATGGAAAA TGAAGAGGCTGATGAATATAATCCGGAATGGATCACTTACCACTTTGGATGAACAGCTTC AGGATCCAAGCTTGGATGATGATAAAGGAAACCAAATTAGAAGTGAGTTTGAGGCAAAGC TCGCTGCAAGAAAGATCTTTCATAATGTTGCTAAGCCAGGATCAAAGTTCATCTATGCAA ACGACATAATGCGGTTTCTGCCAGATGACGAAGCTTTGAAGACTTTAAGTCTCTTTGAAG GAGCATCTGAGACGAACAGGATCAGCAAGTCATCTCTTAAAAACTGGGTGGTGAATGCTT TTAGAGAGAGAAGAGCTCTTGCATTGACCCTAAACGACACCAAAACAGCAGTAAACAGGC TTCACAAGATGGTGAATATCGTGGTTGGGATCATCATACTTGTTATCTGGCTTATCATAC TTGGAATCACTTCCACCAAATTCCTCGTCGTCATGAGCTCGCAAGTCGTGGTTGTAGCAT TCATATTTGGAAACATGTGCAAGATAGTATTTGAATCTATCATCTACTTGTTTGTGATAC ATCCGTTTGATGTAGGCGATCGATGTGAAATTGATGGAGTCCAGATGGTTGTGGAAGAGA TGAACATATTGACAACAGTTTTCTTGAGATTTGATAACCAGAAAGTCGTGTACCCGAACA GTCTTCTCTGGACTAAATCCATCGGAAATTATTACCGTAGTCCTGATATGGGAGATGGTA TCGAATTCTCCATCCACATTACTACTCCAGCTGAGAAAATCATACTCATCAAACAGAGAA TCACAAGTTACATTGAGGGCAAGAAGGATCATTGGTATCCAGCGCCAATGATAGTATTCA AAGACATGGAGTCATTAAACAGCGTGAGAATTGCGGTTTGGCCAACACATCGAATGAATC ATCAAGATATGGGAGAGAAATGGGCTCGAAGGTCTCAACTTGTTGAAGAGATTGCCAAAA TTTGCAGAGAGCTTGACATTGAGTATAGATTGTATCCTCTTGATATCAATGTCCGAAACT TGCCCACTTCTACGGCTTTGCCTGTTTCCGACCGTCTTCCACCAAACTGGAGTGCTCCAG CTTCTGGCAGCAACTGAGAAACTATAGATAAAACTTTTTATATAGTTTGGATCAAGAGGT TCTGTTTTCTCATTTTTCTTTTATGAGCTCTACAAATTTAGAATTAGGATTGGATACTTG ATGATTACTCTACTTTAATGTGATGTATAAATTTTGGCTCTCTCAATCTGCATAGTGGTC TCATAGTGTTTTTGCCTTTTGGATTTTTGGTTTATGAATACTGCTTCTAATTTCGGTTAG TCCAAACTTAACGGTATTTCTCTTTTCTTTTTCCCGGTTTAA