Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G77130.1
CDS Infomation	\| plant glycogenin-like starch initiation protein 2 \| Chr1:28979066-28981228 REVERSE LENGTH=1857 \| 201606
Sequence	ATGATACCTTCCTCAAGTCCCATGGAGTCAAGACATCGACTCTCGTTCTCAAATGAGAAG ACAAGTAGGAGGAGATTTCAAAGAATTGAGAAGGGTGTCAAGTTCAACACTCTGAAACTT GTGTTGATTTGTATAATGCTTGGAGCTTTGTTCACGATCTACCGTTTTCGTTATCCACCG CTACAAATTCCTGAAATTCCAACTAGTTTTGGTCTTACTACTGATCCTCGCTATGTAGCT ACAGCTGAGATCAACTGGAACCATATGTCAAATCTTGTTGAGAAGCACGTATTTGGTAGA AGCGAGTATCAAGGAATTGGTCTTATAAATCTTAACGATAACGAGATTGATCGATTCAAG GAGGTAACGAAATCTGACTGTGATCATGTAGCTTTGCATCTAGATTATGCTGCAAAGAAC ATAACATGGGAATCTTTATACCCGGAATGGATTGATGAAGTTGAAGAATTCGAAGTCCCT ACTTGTCCTTCTCTGCCTTTGATTCAAATTCCTGGCAAGCCTCGGATTGATCTTGTAATT GCCAAGCTTCCGTGTGATAAATCAGGAAAATGGTCTAGAGATGTGGCTCGCTTGCATTTA CAACTTGCAGCAGCTCGAGTGGCGGCTTCTTCTAAAGGACTTCATAATGTTCATGTGATT TTGGTATCTGATTGCTTTCCAATACCGAATCTTTTTACGGGTCAAGAACTTGTTGCCCGT CAAGGAAACATATGGCTGTATAAGCCTAATCTTCACCAGCTAAGACAAAAGTTACAGCTT CCTGTTGGTTCCTGTGAACTTTCTGTTCCTCTTCAAGCTAAAGATAATTTCTACTCCGCA GGTGCAAAGAAAGAAGCTTACGCGACTATCTTGCATTCTGCCCAATTTTATGTCTGTGGA GCCATTGCAGCTGCACAGAGCATTCGAATGTCAGGCTCTACTCGTGATCTGGTCATACTT GTTGATGAAACGATAAGCGAATACCATAAAAGTGGCTTGGTAGCTGCTGGATGGAAGATT CAAATGTTTCAAAGAATCAGGAACCCGAATGCTGTACCAAATGCCTACAACGAATGGAAC TACAGCAAGTTTCGTCTTTGGCAACTGACTGAATACAGTAAGATCATCTTCATCGATGCA GACATGCTTATCCTGAGAAACATTGATTTCCTCTTCGAGTTCCCTGAGATATCAGCAACT GGAAACAATGCTACGCTCTTCAACTCTGGTCTAATGGTGGTTGAGCCATCTAATTCAACA TTCCAGTTACTAATGGATAACATTAATGAAGTTGTGTCTTACAACGGAGGAGACCAAGGT TACCTTAACGAGATATTCACATGGTGGCATCGGATTCCAAAACACATGAATTTCTTGAAG CATTTCTGGGAAGGAGACGAACCTGAGATTAAAAAAATGAAGACGAGTCTATTTGGAGCT GATCCTCCGATCCTATACGTTCTTCATTACCTAGGTTATAACAAACCCTGGTTATGCTTC AGAGACTATGACTGCAATTGGAATGTCGATATTTTCCAGGAATTTGCTAGTGACGAGGCT CATAAAACCTGGTGGAGAGTGCACGACGCAATGCCTGAAAACTTGCATAAGTTCTGTCTA CTAAGATCGAAACAGAAGGCGCAACTTGAATGGGATAGGAGACAAGCAGAGAAAGGGAAC TACAAAGATGGACATTGGAAGATAAAGATCAAAGACAAGAGACTTAAGACTTGTTTCGAA GATTTCTGCTTTTGGGAGAGTATGCTTTGGCATTGGGGTGAGACGAACTCTACCAACAAT TCTTCCACCACCACCACTTCATCACCGCCGCATAAAACCGCTCTCCCTTCCCTGTGA

Peptide Sequence

PEP ID	AT1G77130.1
PEP Infomation	\| plant glycogenin-like starch initiation protein 2 \| Chr1:28979066-28981228 REVERSE LENGTH=618 \| 201606
Sequence	MIPSSSPMESRHRLSFSNEKTSRRRFQRIEKGVKFNTLKLVLICIMLGALFTIYRFRYPP LQIPEIPTSFGLTTDPRYVATAEINWNHMSNLVEKHVFGRSEYQGIGLINLNDNEIDRFK EVTKSDCDHVALHLDYAAKNITWESLYPEWIDEVEEFEVPTCPSLPLIQIPGKPRIDLVI AKLPCDKSGKWSRDVARLHLQLAAARVAASSKGLHNVHVILVSDCFPIPNLFTGQELVAR QGNIWLYKPNLHQLRQKLQLPVGSCELSVPLQAKDNFYSAGAKKEAYATILHSAQFYVCG AIAAAQSIRMSGSTRDLVILVDETISEYHKSGLVAAGWKIQMFQRIRNPNAVPNAYNEWN YSKFRLWQLTEYSKIIFIDADMLILRNIDFLFEFPEISATGNNATLFNSGLMVVEPSNST FQLLMDNINEVVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEPEIKKMKTSLFGA DPPILYVLHYLGYNKPWLCFRDYDCNWNVDIFQEFASDEAHKTWWRVHDAMPENLHKFCL LRSKQKAQLEWDRRQAEKGNYKDGHWKIKIKDKRLKTCFEDFCFWESMLWHWGETNSTNN SSTTTTSSPPHKTALPSL

Transcript Sequence

Transcript ID	AT1G77130.1
Transcript Infomation	\| plant glycogenin-like starch initiation protein 2 \| Chr1:28978864-28981345 REVERSE LENGTH=2176 \| 201606
Sequence	TGCCTTGGTCCAAAATCAAATTAATTTCTCCTTCCCAAATCCCTAAAATGTCTCGTCTTT TGTTGTTTACCAGGCGATTATGAAATTCTCGAAACCGACCCTGGTCTTACGGAGACGATG ATACCTTCCTCAAGTCCCATGGAGTCAAGACATCGACTCTCGTTCTCAAATGAGAAGACA AGTAGGAGGAGATTTCAAAGAATTGAGAAGGGTGTCAAGTTCAACACTCTGAAACTTGTG TTGATTTGTATAATGCTTGGAGCTTTGTTCACGATCTACCGTTTTCGTTATCCACCGCTA CAAATTCCTGAAATTCCAACTAGTTTTGGTCTTACTACTGATCCTCGCTATGTAGCTACA GCTGAGATCAACTGGAACCATATGTCAAATCTTGTTGAGAAGCACGTATTTGGTAGAAGC GAGTATCAAGGAATTGGTCTTATAAATCTTAACGATAACGAGATTGATCGATTCAAGGAG GTAACGAAATCTGACTGTGATCATGTAGCTTTGCATCTAGATTATGCTGCAAAGAACATA ACATGGGAATCTTTATACCCGGAATGGATTGATGAAGTTGAAGAATTCGAAGTCCCTACT TGTCCTTCTCTGCCTTTGATTCAAATTCCTGGCAAGCCTCGGATTGATCTTGTAATTGCC AAGCTTCCGTGTGATAAATCAGGAAAATGGTCTAGAGATGTGGCTCGCTTGCATTTACAA CTTGCAGCAGCTCGAGTGGCGGCTTCTTCTAAAGGACTTCATAATGTTCATGTGATTTTG GTATCTGATTGCTTTCCAATACCGAATCTTTTTACGGGTCAAGAACTTGTTGCCCGTCAA GGAAACATATGGCTGTATAAGCCTAATCTTCACCAGCTAAGACAAAAGTTACAGCTTCCT GTTGGTTCCTGTGAACTTTCTGTTCCTCTTCAAGCTAAAGATAATTTCTACTCCGCAGGT GCAAAGAAAGAAGCTTACGCGACTATCTTGCATTCTGCCCAATTTTATGTCTGTGGAGCC ATTGCAGCTGCACAGAGCATTCGAATGTCAGGCTCTACTCGTGATCTGGTCATACTTGTT GATGAAACGATAAGCGAATACCATAAAAGTGGCTTGGTAGCTGCTGGATGGAAGATTCAA ATGTTTCAAAGAATCAGGAACCCGAATGCTGTACCAAATGCCTACAACGAATGGAACTAC AGCAAGTTTCGTCTTTGGCAACTGACTGAATACAGTAAGATCATCTTCATCGATGCAGAC ATGCTTATCCTGAGAAACATTGATTTCCTCTTCGAGTTCCCTGAGATATCAGCAACTGGA AACAATGCTACGCTCTTCAACTCTGGTCTAATGGTGGTTGAGCCATCTAATTCAACATTC CAGTTACTAATGGATAACATTAATGAAGTTGTGTCTTACAACGGAGGAGACCAAGGTTAC CTTAACGAGATATTCACATGGTGGCATCGGATTCCAAAACACATGAATTTCTTGAAGCAT TTCTGGGAAGGAGACGAACCTGAGATTAAAAAAATGAAGACGAGTCTATTTGGAGCTGAT CCTCCGATCCTATACGTTCTTCATTACCTAGGTTATAACAAACCCTGGTTATGCTTCAGA GACTATGACTGCAATTGGAATGTCGATATTTTCCAGGAATTTGCTAGTGACGAGGCTCAT AAAACCTGGTGGAGAGTGCACGACGCAATGCCTGAAAACTTGCATAAGTTCTGTCTACTA AGATCGAAACAGAAGGCGCAACTTGAATGGGATAGGAGACAAGCAGAGAAAGGGAACTAC AAAGATGGACATTGGAAGATAAAGATCAAAGACAAGAGACTTAAGACTTGTTTCGAAGAT TTCTGCTTTTGGGAGAGTATGCTTTGGCATTGGGGTGAGACGAACTCTACCAACAATTCT TCCACCACCACCACTTCATCACCGCCGCATAAAACCGCTCTCCCTTCCCTGTGAATTCTT TTGGCTTTCTGGTTTGGTACAAATTACTCTGCCTTTCGCCAACCAAATGTGGGTTGGATA TGTTCTTTTGTTTTTTTATTATCAGCTTGAAACCTGTATACGAATCCCAGAAACAATGTA ATCATGAGGGGATAAAGGAATGAAAGACAAATAAAGAATTTACAGGAAGATGAAGCTTTG CATTCAAATTTTAAAA