Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G72440.1
CDS Infomation	\| CCAAT-binding factor \| Chr1:27268325-27273596 REVERSE LENGTH=3132 \| 201606
Sequence	ATGTCAAAGATAAAGCCTTTGAGTAAATCATCGCAGGACTTGAGTCTTCTCACATCTGAT ATCGCATCATTCGCTTCTTCTATTGGCTTAGCTTCTGCTCTTCCTTCTTCGGGTTTCAAC GACACTGATTTCCGAAAACCAGCTAAATCCAAAACCCAGAAACGGAAAAAGCCTAAGAAG GATCAGCAACACAAGGATGAAGATGAAGAAGGAGAGCCAAAATCGAACATTGGGAATGAA AAGGGAAAAGATTTTGGAGCGAGGAAGCAAAACAAAGATGCACCGGTGAAGCAAACGTTA CAACCGAAGCCAAAGCCTGGATTCTTATCGATTGATGATGAGAGTACTGGGTACAAGAAA AAACGTTTCGATGAATTCAAGAGTTTGCCTAAGTTACCATTGGTGAAAGCGAGTTTATTG AGCTCTGAATGGTACAACGATGCAGCTGAGTTTGAGGAGAAGGTGTTTGGTGGCCGGAAA GTGGCGGTGGCGAATAAGGAGGATTTTAAGGGTGTGGTGGAGAAGAAGAGAGAATTAGGA GAGAGATTGATGTGGCAATACGCAGAGGACTTTGCAACTTCGAAAGGAAAAGGTGGAGAT ATGAAGATGGTGATTTCTGCTCAAAAGTCTGGGACAGTTGCTGATAAAATCACTGCCTTT GAGATTATGGTTGGAGAGAATCCCATTGCAAATATGAGATCTCTTGATGCCTTATTGGGA ATGGTGACCTCAAAGGTTGGAAAAAGATTTGCATTTAAGGGTCTTAAGGCTCTATCAGAA ATTTTGATCAGGTTATTACCTGATCGCAAGCTGAAGTCACTTTTACAGCGACCTTTAAAC ATCATTCCGGAAAATAAGGATGGTTACTCGCTTTTGCTGTTTTGGTACTGGGAGGATTGC TTGAAACAGAGGTATGAGCGCTTCGTCACAGCCCTTGATGAATCATCTAAAGATATGCTT CCAGAGCTGAAGGACAAGGCTTTAAAGACAATATATTTCATGTTGACAAGCAAATCAGAA CAAGAGCGGAAATTGCTAGTGTCATTGGTGAACAAGTTGGGGGATCCTCAAAACAAGAGT GCATCTAATGCTGATTATCATCTGACAAATCTTTTGGCTGATCATCCTAACATGAAGGCT GTGGTTATAGATGAAGTTGACTCCTTTCTCTTCCGACCCCATCTTGGGTTACGAGCAAAG TATCATGCTGTTAACTTTTTGAGTCAGATCCGATTGAGCCACAAAGGAGAGGATCCAAAG GTGGCAAAACGTCTAATTGATGTATATTTTGCCCTGTTTAAGGTTTTAACTACAGAAGCA AATAGGAAACAAGGTGCAGATGACAAAGGAGCCGCTGATAAGAAAAAATCCAACCCAAAG GACACAAAGCAAGAAGTGTCAACTGATTCACCTATTGAGTTGGATTCAAGAATTCTATCA GCTCTACTGACGGGAGTTAACAGAGCTTTTCCATATGTTTCCACTGACGAGGCTGATGAT ATAATTGAATCCCAGACGCCAGTGCTTTTCAAACTGGTACATTCGGCGAATTTCAATGTA GGAGTCCAATCACTGATGCTTCTTGACAAGATCTCATCCAAGAATAAGATTGTTAGTGAC AGGTTTTACCGTGCATTGTACTCGAAACTTCTACTCCCCTCCGCAATGAATTCTTCCAAG GCTGAAATGTTTATTGGGCTTCTTCTCAGAGCCATGAAAAATGATATAAATATCAAGCGT GTGGCTGCCTTCTCCAAAAGAGTCTTGCAGGTTGCGCTTCAACAGCCACCACAGTATGCC TGTGGATGCCTTTTCCTATTATCTGAAGTCTTAAAATCAAGGCCACCTCTATGGAAGATG GTGGTCCAGAGGGAATCAGTTGAGGAAGAAGAAGATATAGAACATTTTGAGGATGTGATA GAGGGAGATGATGTTGATCCCAATAAGAAAGCAGAGAATGACGAGAATGTTGTTGAAGTT GATCATGATGGTGTCGAAAAGTCAAGTAGAGATGGTGATTCTTCTTCAGATGACGAAGAG GCTTTGGCAATCAGGCTATCTGATGAAGAAGATGATAATGCTTCTGATGATTCTGAAGAG CTAATTAGAAACGAAACTCCCCAGCTTGAAGAAGTCATGGAGGTTTCTAATGATATGGAA AAAAGAAGCCAACCGCCAATGAGACCGAGTTCTCTTCCTGGAGGATATGATCCTCGTCAT AGAGAACCTTCTTACTGTAACGCAGACCGTGCAAGTTGGTGGGAATTGGGGGTTCTTTCA AAACATGCTCACCCCTCGGTTGCTACAATGGCTGGAACCCTTCTCTCAGGAACAAATATT GTTTACAACGGAAACCCGCTGAACGATTTATCTCTAACTGCTTTCTTGGATAAATTCATG GAGAAGAAACCAAAGCAAAACACTTGGCATGGTGGTTCCCAGATTGAACCTTCCAAGAAG CTTGACATGTCAAACCGTGTGATTGGAGCTGAAATTCTCTCATTAGCAGAAGGAGATGTG GCTCCTGAAGATCTAGTCTTCCACAAGTTCTATGTGAACAAGATGACCAGTACGAAGCAG TCAAAGAAAAAGAAGAAGAAGAAGCTACCTGAAGAAGAAGCTGCTGAAGAACTTTACGAT GTGAATGATGGAGATGGTGGAGAAAACTACGATAGTGATGTTGAATTCGAGGCTGGTGAT GAGAGTGACAATGAGGAGATTGAGAATATGCTGGATGATGTTGATGATAATGCTGTGGAA GAAGAGGGCGGTGAATATGACTATGATGATCTAGATGGAGTAGCCGGCGAGGATGATGAA GAGCTCGTGGCTGATGTGAGCGATGCAGAGATGGACACAGACATGGACATGGACCTGATT GATGATGAAGATGATAACAACGTTGATGATGATGGTACTGGTGATGGTGGTGATGATGAT AGTGATGGTGATGATGGTCGTAGTAAGAAGAAAAAGAAAGAGAAAAGAAAACGGAAATCT CCATTTGCGAGTCTTGAAGAGTACAAGCATTTGATAGACCAAGACGAGAAAGAGGATTCG AAGACTAAAAGAAAAGCAACATCAGAGCCCACAAAGAAGAAGAAAAAGAAGAAGTCTAAA GCATCAGAGTAA

Peptide Sequence

PEP ID	AT1G72440.1
PEP Infomation	\| CCAAT-binding factor \| Chr1:27268325-27273596 REVERSE LENGTH=1043 \| 201606
Sequence	MSKIKPLSKSSQDLSLLTSDIASFASSIGLASALPSSGFNDTDFRKPAKSKTQKRKKPKK DQQHKDEDEEGEPKSNIGNEKGKDFGARKQNKDAPVKQTLQPKPKPGFLSIDDESTGYKK KRFDEFKSLPKLPLVKASLLSSEWYNDAAEFEEKVFGGRKVAVANKEDFKGVVEKKRELG ERLMWQYAEDFATSKGKGGDMKMVISAQKSGTVADKITAFEIMVGENPIANMRSLDALLG MVTSKVGKRFAFKGLKALSEILIRLLPDRKLKSLLQRPLNIIPENKDGYSLLLFWYWEDC LKQRYERFVTALDESSKDMLPELKDKALKTIYFMLTSKSEQERKLLVSLVNKLGDPQNKS ASNADYHLTNLLADHPNMKAVVIDEVDSFLFRPHLGLRAKYHAVNFLSQIRLSHKGEDPK VAKRLIDVYFALFKVLTTEANRKQGADDKGAADKKKSNPKDTKQEVSTDSPIELDSRILS ALLTGVNRAFPYVSTDEADDIIESQTPVLFKLVHSANFNVGVQSLMLLDKISSKNKIVSD RFYRALYSKLLLPSAMNSSKAEMFIGLLLRAMKNDINIKRVAAFSKRVLQVALQQPPQYA CGCLFLLSEVLKSRPPLWKMVVQRESVEEEEDIEHFEDVIEGDDVDPNKKAENDENVVEV DHDGVEKSSRDGDSSSDDEEALAIRLSDEEDDNASDDSEELIRNETPQLEEVMEVSNDME KRSQPPMRPSSLPGGYDPRHREPSYCNADRASWWELGVLSKHAHPSVATMAGTLLSGTNI VYNGNPLNDLSLTAFLDKFMEKKPKQNTWHGGSQIEPSKKLDMSNRVIGAEILSLAEGDV APEDLVFHKFYVNKMTSTKQSKKKKKKKLPEEEAAEELYDVNDGDGGENYDSDVEFEAGD ESDNEEIENMLDDVDDNAVEEEGGEYDYDDLDGVAGEDDEELVADVSDAEMDTDMDMDLI DDEDDNNVDDDGTGDGGDDDSDGDDGRSKKKKKEKRKRKSPFASLEEYKHLIDQDEKEDS KTKRKATSEPTKKKKKKKSKASE

Transcript Sequence

Transcript ID	AT1G72440.1
Transcript Infomation	\| CCAAT-binding factor \| Chr1:27268092-27273935 REVERSE LENGTH=3704 \| 201606
Sequence	GCATTGAATGTTCTAGCGATTGGGCTGGACCGTCTCAGGAACCCAACCTTAATGAAAAAA CATCGTCTCATTGATTTTAGGTCGTTAAGTCTGTTTTGCCCTTGTCTTATCCCGTAATTA CGAAATTAGCCTTCTACCATTTCCTCTGTCTGCTTCTCTCTTGCCGTTTTCTAAAACCCT AAAAATTTCTGTTGAACCCCAAACATTGAAGTTTATCTTTCTTTTTCATTGTTCGATCTC AAAGCACAGAGATTGCTTAAACCTAACTGTCTCAGTTCTTTTAAAAACAGTCATCTCTCA CAAAACTCTCTTAACCCTCTTCATATGCTTTGAGAAAAAATGTCAAAGATAAAGCCTTTG AGTAAATCATCGCAGGACTTGAGTCTTCTCACATCTGATATCGCATCATTCGCTTCTTCT ATTGGCTTAGCTTCTGCTCTTCCTTCTTCGGGTTTCAACGACACTGATTTCCGAAAACCA GCTAAATCCAAAACCCAGAAACGGAAAAAGCCTAAGAAGGATCAGCAACACAAGGATGAA GATGAAGAAGGAGAGCCAAAATCGAACATTGGGAATGAAAAGGGAAAAGATTTTGGAGCG AGGAAGCAAAACAAAGATGCACCGGTGAAGCAAACGTTACAACCGAAGCCAAAGCCTGGA TTCTTATCGATTGATGATGAGAGTACTGGGTACAAGAAAAAACGTTTCGATGAATTCAAG AGTTTGCCTAAGTTACCATTGGTGAAAGCGAGTTTATTGAGCTCTGAATGGTACAACGAT GCAGCTGAGTTTGAGGAGAAGGTGTTTGGTGGCCGGAAAGTGGCGGTGGCGAATAAGGAG GATTTTAAGGGTGTGGTGGAGAAGAAGAGAGAATTAGGAGAGAGATTGATGTGGCAATAC GCAGAGGACTTTGCAACTTCGAAAGGAAAAGGTGGAGATATGAAGATGGTGATTTCTGCT CAAAAGTCTGGGACAGTTGCTGATAAAATCACTGCCTTTGAGATTATGGTTGGAGAGAAT CCCATTGCAAATATGAGATCTCTTGATGCCTTATTGGGAATGGTGACCTCAAAGGTTGGA AAAAGATTTGCATTTAAGGGTCTTAAGGCTCTATCAGAAATTTTGATCAGGTTATTACCT GATCGCAAGCTGAAGTCACTTTTACAGCGACCTTTAAACATCATTCCGGAAAATAAGGAT GGTTACTCGCTTTTGCTGTTTTGGTACTGGGAGGATTGCTTGAAACAGAGGTATGAGCGC TTCGTCACAGCCCTTGATGAATCATCTAAAGATATGCTTCCAGAGCTGAAGGACAAGGCT TTAAAGACAATATATTTCATGTTGACAAGCAAATCAGAACAAGAGCGGAAATTGCTAGTG TCATTGGTGAACAAGTTGGGGGATCCTCAAAACAAGAGTGCATCTAATGCTGATTATCAT CTGACAAATCTTTTGGCTGATCATCCTAACATGAAGGCTGTGGTTATAGATGAAGTTGAC TCCTTTCTCTTCCGACCCCATCTTGGGTTACGAGCAAAGTATCATGCTGTTAACTTTTTG AGTCAGATCCGATTGAGCCACAAAGGAGAGGATCCAAAGGTGGCAAAACGTCTAATTGAT GTATATTTTGCCCTGTTTAAGGTTTTAACTACAGAAGCAAATAGGAAACAAGGTGCAGAT GACAAAGGAGCCGCTGATAAGAAAAAATCCAACCCAAAGGACACAAAGCAAGAAGTGTCA ACTGATTCACCTATTGAGTTGGATTCAAGAATTCTATCAGCTCTACTGACGGGAGTTAAC AGAGCTTTTCCATATGTTTCCACTGACGAGGCTGATGATATAATTGAATCCCAGACGCCA GTGCTTTTCAAACTGGTACATTCGGCGAATTTCAATGTAGGAGTCCAATCACTGATGCTT CTTGACAAGATCTCATCCAAGAATAAGATTGTTAGTGACAGGTTTTACCGTGCATTGTAC TCGAAACTTCTACTCCCCTCCGCAATGAATTCTTCCAAGGCTGAAATGTTTATTGGGCTT CTTCTCAGAGCCATGAAAAATGATATAAATATCAAGCGTGTGGCTGCCTTCTCCAAAAGA GTCTTGCAGGTTGCGCTTCAACAGCCACCACAGTATGCCTGTGGATGCCTTTTCCTATTA TCTGAAGTCTTAAAATCAAGGCCACCTCTATGGAAGATGGTGGTCCAGAGGGAATCAGTT GAGGAAGAAGAAGATATAGAACATTTTGAGGATGTGATAGAGGGAGATGATGTTGATCCC AATAAGAAAGCAGAGAATGACGAGAATGTTGTTGAAGTTGATCATGATGGTGTCGAAAAG TCAAGTAGAGATGGTGATTCTTCTTCAGATGACGAAGAGGCTTTGGCAATCAGGCTATCT GATGAAGAAGATGATAATGCTTCTGATGATTCTGAAGAGCTAATTAGAAACGAAACTCCC CAGCTTGAAGAAGTCATGGAGGTTTCTAATGATATGGAAAAAAGAAGCCAACCGCCAATG AGACCGAGTTCTCTTCCTGGAGGATATGATCCTCGTCATAGAGAACCTTCTTACTGTAAC GCAGACCGTGCAAGTTGGTGGGAATTGGGGGTTCTTTCAAAACATGCTCACCCCTCGGTT GCTACAATGGCTGGAACCCTTCTCTCAGGAACAAATATTGTTTACAACGGAAACCCGCTG AACGATTTATCTCTAACTGCTTTCTTGGATAAATTCATGGAGAAGAAACCAAAGCAAAAC ACTTGGCATGGTGGTTCCCAGATTGAACCTTCCAAGAAGCTTGACATGTCAAACCGTGTG ATTGGAGCTGAAATTCTCTCATTAGCAGAAGGAGATGTGGCTCCTGAAGATCTAGTCTTC CACAAGTTCTATGTGAACAAGATGACCAGTACGAAGCAGTCAAAGAAAAAGAAGAAGAAG AAGCTACCTGAAGAAGAAGCTGCTGAAGAACTTTACGATGTGAATGATGGAGATGGTGGA GAAAACTACGATAGTGATGTTGAATTCGAGGCTGGTGATGAGAGTGACAATGAGGAGATT GAGAATATGCTGGATGATGTTGATGATAATGCTGTGGAAGAAGAGGGCGGTGAATATGAC TATGATGATCTAGATGGAGTAGCCGGCGAGGATGATGAAGAGCTCGTGGCTGATGTGAGC GATGCAGAGATGGACACAGACATGGACATGGACCTGATTGATGATGAAGATGATAACAAC GTTGATGATGATGGTACTGGTGATGGTGGTGATGATGATAGTGATGGTGATGATGGTCGT AGTAAGAAGAAAAAGAAAGAGAAAAGAAAACGGAAATCTCCATTTGCGAGTCTTGAAGAG TACAAGCATTTGATAGACCAAGACGAGAAAGAGGATTCGAAGACTAAAAGAAAAGCAACA TCAGAGCCCACAAAGAAGAAGAAAAAGAAGAAGTCTAAAGCATCAGAGTAAGAAGCAAGA CTTGTTGCTTGCTATGCAAGGCTCCTTATGTTGAGTATTATTATTATACTGTGTAACGCT GGAGATAGTCACTCCAATTTTGTGGCGTTTGTTTTGTATTTCTTTCTTCCTAATGTTTTC ATCTTTGAAGAGAATAACTGTACGATTATGTTTTAATTTAATCACTTGAAACTTTGTTCA AATATCACAAAAATTGAGTATTTTTAAAATCAAATATTGAACTT