Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT1G66660.2
CDS Infomation

| Protein with RING/U-box and TRAF-like domain | Chr1:24862056-24863332 REVERSE LENGTH=1047 | 201606
Sequence

ATGGCAAGATCTGGAGGAAACGACGGACATAGAGCCGGCGACAGTCGTCTCTCGAAGAGG
CAACGACTTCCTCCTTCTCCCGATGAATCTGAAGAGGAATTAGACCCAGAGTTGTTCGAA
GAGCCAAGTAATTTAGAAGGATACGAAGATGGAGAATTCGAAGAAGATGAAGAAGAATTC
GAAGAAGAAGAAGAAGAATTAGAAGAGGAAGAAGACGAAGAAGAAGAAGAAGAAGAAAAC
GTTACTACTGATGAACAATCTGGAAGTCCTAAATCATCCCAACCGGTGAAGCTTCAGAGC
TCAGATGTTCTCGATTGTCCTACTTGTTGTGAACCACTCAAGAGACCAATCTATCAGTGT
AGTAATGGGCATCTAGCTTGTTCGTCATGCTGCCAAAAATTGAACAAGAAATGCTCGTTC
TGTAGATGTAACATCGGGGATATACGATGCAGAGCGATGGAGAAGGTTATCGAAGCATCT
ATAGTCCCGTGTCCAAATGCGAAACACGGGTGTAAAGAAACCACCACGTATTGTAATCAG
TCAAGCCATGAGAAGGTTTGCAAGTTTGTCCGATGTTCTTGCCCTGTATCGAACTGCAAC
TACGTGAGTTCATACTCGAATCTCAAAAGCCATGCTTGTAGTACTGCACACGTTTGGGGT
GAAGACGACATCCACTTCCAGTTAGTGATTGACCGTCCTAGAATTTTTAACATGAACCTT
GGTAGGAAGAAGACGGTTGTATTTAAGGAAGAGAAAGAGGGTGATTTGATTGTTGTTCAG
GCTTTCAAGGGATTGGAAGGTGTTTATGTGACTGTCAACCGTATTGCACATATGGCTCCG
GGAATACGTGACTTGTCATGTAGTTTGGCTAAGCTCAACGAGTATAGCACACTAAGGAGT
GGATCGTTGGTGAAGAAAATTCAGAAAGTGAGAGAGAAAATGCATCTTGAAGATGACTTG
ATGTGGATACCGCCTAAAATGTTGAGCGGTGACCACTGGAAGATGCAGATTTGCATTGCC
TATGGATATAAATTTATTCACATCTGA

Peptide Sequence

PEP ID

AT1G66660.2
PEP Infomation

| Protein with RING/U-box and TRAF-like domain | Chr1:24862056-24863332 REVERSE LENGTH=348 | 201606
Sequence

MARSGGNDGHRAGDSRLSKRQRLPPSPDESEEELDPELFEEPSNLEGYEDGEFEEDEEEF
EEEEEELEEEEDEEEEEEENVTTDEQSGSPKSSQPVKLQSSDVLDCPTCCEPLKRPIYQC
SNGHLACSSCCQKLNKKCSFCRCNIGDIRCRAMEKVIEASIVPCPNAKHGCKETTTYCNQ
SSHEKVCKFVRCSCPVSNCNYVSSYSNLKSHACSTAHVWGEDDIHFQLVIDRPRIFNMNL
GRKKTVVFKEEKEGDLIVVQAFKGLEGVYVTVNRIAHMAPGIRDLSCSLAKLNEYSTLRS
GSLVKKIQKVREKMHLEDDLMWIPPKMLSGDHWKMQICIAYGYKFIHI

Transcript Sequence

Transcript ID

AT1G66660.2
Transcript Infomation

| Protein with RING/U-box and TRAF-like domain | Chr1:24861876-24863426 REVERSE LENGTH=1321 | 201606
Sequence

GTTTGGTTCGGCTACTCAAAACCCCCATATTAAAACGAAAGGCCCATAAGATCAGCATAG
AGCCGGCGAAAACCCCATCGGAGGAGATTTAGGAATGGCAAGATCTGGAGGAAACGACGG
ACATAGAGCCGGCGACAGTCGTCTCTCGAAGAGGCAACGACTTCCTCCTTCTCCCGATGA
ATCTGAAGAGGAATTAGACCCAGAGTTGTTCGAAGAGCCAAGTAATTTAGAAGGATACGA
AGATGGAGAATTCGAAGAAGATGAAGAAGAATTCGAAGAAGAAGAAGAAGAATTAGAAGA
GGAAGAAGACGAAGAAGAAGAAGAAGAAGAAAACGTTACTACTGATGAACAATCTGGAAG
TCCTAAATCATCCCAACCGGTGAAGCTTCAGAGCTCAGATGTTCTCGATTGTCCTACTTG
TTGTGAACCACTCAAGAGACCAATCTATCAGTGTAGTAATGGGCATCTAGCTTGTTCGTC
ATGCTGCCAAAAATTGAACAAGAAATGCTCGTTCTGTAGATGTAACATCGGGGATATACG
ATGCAGAGCGATGGAGAAGGTTATCGAAGCATCTATAGTCCCGTGTCCAAATGCGAAACA
CGGGTGTAAAGAAACCACCACGTATTGTAATCAGTCAAGCCATGAGAAGGTTTGCAAGTT
TGTCCGATGTTCTTGCCCTGTATCGAACTGCAACTACGTGAGTTCATACTCGAATCTCAA
AAGCCATGCTTGTAGTACTGCACACGTTTGGGGTGAAGACGACATCCACTTCCAGTTAGT
GATTGACCGTCCTAGAATTTTTAACATGAACCTTGGTAGGAAGAAGACGGTTGTATTTAA
GGAAGAGAAAGAGGGTGATTTGATTGTTGTTCAGGCTTTCAAGGGATTGGAAGGTGTTTA
TGTGACTGTCAACCGTATTGCACATATGGCTCCGGGAATACGTGACTTGTCATGTAGTTT
GGCTAAGCTCAACGAGTATAGCACACTAAGGAGTGGATCGTTGGTGAAGAAAATTCAGAA
AGTGAGAGAGAAAATGCATCTTGAAGATGACTTGATGTGGATACCGCCTAAAATGTTGAG
CGGTGACCACTGGAAGATGCAGATTTGCATTGCCTATGGATATAAATTTATTCACATCTG
AAGAATCCTCTCAAAGTCTCAATTCTTTTGCTCTGCTCTTATAACTTAGAAGTAGACGGT
CGTTGGATCATAAACCCTGCTTCATGTGTTATGTGAAAATTCTTTTTTAGAGATAAAATG
TTAATTGTATTGGTCCGGGTTCGACTGATTTAGTTGGTACCGACTTGAACTCAAACTTAA
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