Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G63020.1
CDS Infomation	\| nuclear RNA polymerase D1A \| Chr1:23355329-23361126 REVERSE LENGTH=4362 \| 201606
Sequence	ATGGAAGACGATTGTGAGGAGCTTCAGGTTCCCGTGGGAACTCTAACCTCGATAGGTTTT AGCATTTCAAACAACAATGATCGAGATAAAATGTCTGTGCTAGAGGTTGAAGCACCGAAT CAGGTGACTGATTCTCGGCTAGGATTACCGAATCCGGATTCTGTCTGCAGAACCTGTGGC AGCAAAGATCGAAAAGTTTGCGAAGGGCATTTCGGGGTTATAAACTTCGCGTACTCGATA ATAAACCCGTATTTCCTCAAGGAGGTAGCTGCGTTGTTAAACAAAATCTGTCCGGGGTGT AAATACATTCGAAAAAAGCAGTTTCAGATTACCGAAGACCAGCCTGAGAGATGTAGATAC TGCACTTTGAATACCGGTTATCCTCTAATGAAGTTTAGGGTAACTACTAAAGAAGTCTTC AGGCGATCCGGAATCGTTGTTGAAGTAAACGAAGAGAGTCTGATGAAACTCAAGAAACGG GGAGTGTTAACATTGCCTCCTGACTATTGGAGTTTTTTGCCGCAAGACTCTAATATCGAC GAGAGCTGTTTGAAACCAACAAGGCGAATAATAACGCATGCACAGGTTTATGCTCTGTTA TTAGGGATTGATCAGAGGCTCATCAAGAAGGATATCCCTATGTTCAACTCTCTTGGTCTG ACATCTTTTCCTGTTACACCAAATGGTTACCGTGTAACCGAAATAGTTCATCAGTTCAAC GGAGCTCGGCTAATATTTGATGAACGGACTCGGATCTACAAGAAACTAGTCGGCTTTGAG GGAAACACACTTGAATTGAGTTCTCGTGTGATGGAATGCATGCAATATTCCAGACTCTTT TCGGAAACTGTGTCTTCGAGTAAAGATTCCGCAAATCCGTACCAGAAGAAGTCTGATACA CCAAAACTTTGCGGTCTAAGGTTCATGAAAGACGTGCTGCTCGGTAAAAGAAGTGATCAT ACATTCCGGACAGTAGTTGTTGGTGATCCGTCCTTGAAGCTCAACGAGATTGGCATACCC GAGAGTATCGCAAAAAGGCTTCAAGTATCAGAGCATCTCAACCAGTGCAATAAAGAAAGG CTTGTCACTTCCTTTGTCCCCACACTGTTGGACAATAAAGAGATGCATGTGAGAAGAGGA GATAGATTGGTGGCTATTCAAGTCAATGACCTCCAAACCGGAGACAAAATATTCCGGAGT TTAATGGATGGAGACACTGTGCTGATGAACAGACCGCCTTCGATTCATCAGCATTCGCTT ATTGCAATGACAGTTAGAATCCTCCCAACGACTTCTGTTGTCTCCTTGAACCCGATCTGC TGTTTGCCGTTCCGTGGTGATTTTGATGGAGATTGTCTCCACGGTTACGTTCCTCAGTCC ATTCAAGCAAAGGTCGAGCTTGATGAGCTTGTTGCTTTGGATAAGCAGCTTATCAACAGA CAGAATGGTCGGAACTTGCTTTCTTTAGGACAAGATAGCTTGACGGCGGCTTATCTGGTC AATGTTGAGAAGAACTGTTATCTTAATCGAGCTCAGATGCAGCAGCTTCAAATGTATTGC CCATTTCAGCTTCCTCCGCCTGCAATTATCAAAGCTTCTCCTTCGAGCACTGAGCCTCAA TGGACGGGAATGCAGCTATTCGGAATGCTGTTTCCTCCCGGGTTTGACTACACTTATCCT CTGAATAATGTAGTTGTGAGTAACGGCGAGCTTTTGTCTTTCTCTGAAGGATCTGCTTGG CTCAGAGATGGAGAAGGGAATTTCATCGAGAGATTGCTCAAACACGACAAAGGGAAAGTT CTTGATATCATCTATTCCGCTCAAGAAATGCTATCTCAGTGGTTGCTGATGCGCGGTTTG AGTGTGTCCTTGGCGGATTTGTACCTTTCCTCTGATCTGCAGTCTCGAAAAAACTTGACT GAAGAGATATCATACGGGTTGCGGGAAGCTGAGCAAGTTTGCAACAAGCAACAGCTAATG GTTGAATCTTGGAGAGATTTCCTTGCAGTTAATGGGGAGGATAAGGAAGAGGATTCAGTA TCGGATTTGGCCCGATTCTGCTATGAGAGACAAAAATCCGCTACATTAAGCGAACTTGCA GTCAGTGCTTTTAAGGATGCTTACAGAGATGTTCAGGCACTAGCATATAGGTATGGTGAT CAATCCAACTCTTTTTTGATCATGTCGAAAGCCGGCAGCAAAGGGAATATCGGGAAGCTG GTTCAGCACAGCATGTGTATCGGTCTGCAGAATTCAGCAGTTTCTTTGTCCTTTGGGTTT CCGCGTGAACTGACTTGCGCTGCTTGGAATGACCCGAACAGTCCACTTCGTGGCGCAAAG GGAAAAGACAGTACCACTACTGAGTCATATGTTCCTTATGGAGTCATTGAGAACTCGTTT CTAACGGGTCTGAATCCATTGGAATCTTTTGTTCATTCAGTTACAAGTCGTGACAGTTCA TTCAGTGGTAATGCTGATCTCCCGGGGACACTGAGCAGAAGATTAATGTTCTTCATGCGG GACATATACGCTGCTTATGATGGCACTGTGAGAAATTCTTTCGGAAACCAGTTAGTCCAG TTTACTTATGAGACTGATGGTCCCGTTGAAGATATCACAGGTGAGGCACTTGGCTCACTT TCTGCTTGTGCATTATCTGAGGCAGCTTACAGCGCGCTGGACCAGCCAATCAGCCTTCTT GAAACTTCGCCGCTTCTGAATCTTAAGAATGTATTGGAGTGTGGATCAAAGAAAGGTCAA CGAGAACAGACAATGTCTTTGTATTTGTCTGAATACCTTTCAAAGAAAAAGCACGGGTTC GAATACGGGTCACTTGAGATCAAGAACCACTTGGAGAAACTTAGTTTCTCAGAGATCGTT TCAACATCTATGATAATATTCTCTCCAAGTTCTAACACGAAAGTACCGTTAAGCCCGTGG GTTTGCCATTTTCATATCTCTGAGAAAGTACTGAAGCGGAAACAACTGAGCGCAGAATCC GTTGTTTCATCTTTAAACGAGCAGTACAAGAGCAGGAACAGAGAACTGAAGCTTGATATA GTTGACTTAGATATACAAAACACAAACCACTGCTCTTCAGACGATCAGGCAATGAAGGAT GATAACGTTTGCATCACGGTGACTGTAGTTGAAGCCTCAAAGCACTCGGTTTTGGAACTG GATGCTATTCGTCTCGTTTTGATCCCTTTTCTTCTTGACTCTCCTGTCAAAGGTGATCAA GGGATCAAAAAGGTGAATATTTTGTGGACTGACCGACCAAAAGCGCCAAAAAGGAATGGG AATCATTTGGCGGGTGAGCTGTACTTGAAGGTTACAATGTATGGAGATCGGGGCAAAAGA AACTGTTGGACCGCTCTTTTAGAAACCTGCCTTCCCATCATGGATATGATTGACTGGGGC CGAAGCCATCCTGATAATATCCGACAATGCTGCTCAGTTTATGGAATAGATGCTGGACGC AGCATTTTCGTAGCAAATTTGGAGTCCGCGGTGTCAGATACTGGTAAGGAGATACTAAGA GAGCATCTGCTTCTCGTAGCTGATAGTCTCTCTGTTACGGGAGAGTTTGTGGCATTAAAC GCCAAAGGTTGGAGTAAACAAAGACAGGTCGAGTCCACGCCTGCACCTTTTACTCAAGCA TGCTTCTCAAGCCCAAGTCAATGCTTTCTCAAAGCTGCTAAGGAAGGTGTCAGAGACGAT CTTCAAGGGTCTATCGACGCTTTAGCTTGGGGAAAAGTTCCTGGTTTCGGAACTGGAGAT CAGTTCGAAATCATCATTTCGCCAAAGGTTCACGGGTTTACTACACCGGTAGATGTGTAT GACCTTTTGAGTAGTACAAAGACGATGCGTAGAACAAACTCTGCGCCTAAATCAGACAAA GCCACGGTCCAGCCTTTTGGCTTGCTACATTCCGCATTCCTGAAAGATATCAAGGTACTC GATGGGAAAGGGATTCCTATGTCACTGCTTAGAACGATCTTTACATGGAAAAACATCGAG TTGCTTTCCCAGTCATTGAAACGCATTCTCCACAGTTACGAGATCAATGAACTGTTGAAT GAGAGGGACGAAGGACTTGTGAAGATGGTTCTGCAGTTGCACCCCAACAGTGTTGAGAAA ATTGGACCAGGCGTCAAAGGAATCCGGGTCGCTAAATCGAAGCACGGAGATTCTTGTTGC TTCGAGGTTGTAAGAATAGACGGGACATTCGAAGACTTCTCATACCACAAGTGTGTCTTG GGAGCAACAAAGATAATTGCCCCAAAGAAAATGAACTTCTACAAGTCAAAGTATCTTAAA AATGGTACACTCGAGTCCGGTGGTTTCTCCGAAAACCCGTGA

Peptide Sequence

PEP ID	AT1G63020.1
PEP Infomation	\| nuclear RNA polymerase D1A \| Chr1:23355329-23361126 REVERSE LENGTH=1453 \| 201606
Sequence	MEDDCEELQVPVGTLTSIGFSISNNNDRDKMSVLEVEAPNQVTDSRLGLPNPDSVCRTCG SKDRKVCEGHFGVINFAYSIINPYFLKEVAALLNKICPGCKYIRKKQFQITEDQPERCRY CTLNTGYPLMKFRVTTKEVFRRSGIVVEVNEESLMKLKKRGVLTLPPDYWSFLPQDSNID ESCLKPTRRIITHAQVYALLLGIDQRLIKKDIPMFNSLGLTSFPVTPNGYRVTEIVHQFN GARLIFDERTRIYKKLVGFEGNTLELSSRVMECMQYSRLFSETVSSSKDSANPYQKKSDT PKLCGLRFMKDVLLGKRSDHTFRTVVVGDPSLKLNEIGIPESIAKRLQVSEHLNQCNKER LVTSFVPTLLDNKEMHVRRGDRLVAIQVNDLQTGDKIFRSLMDGDTVLMNRPPSIHQHSL IAMTVRILPTTSVVSLNPICCLPFRGDFDGDCLHGYVPQSIQAKVELDELVALDKQLINR QNGRNLLSLGQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPPAIIKASPSSTEPQ WTGMQLFGMLFPPGFDYTYPLNNVVVSNGELLSFSEGSAWLRDGEGNFIERLLKHDKGKV LDIIYSAQEMLSQWLLMRGLSVSLADLYLSSDLQSRKNLTEEISYGLREAEQVCNKQQLM VESWRDFLAVNGEDKEEDSVSDLARFCYERQKSATLSELAVSAFKDAYRDVQALAYRYGD QSNSFLIMSKAGSKGNIGKLVQHSMCIGLQNSAVSLSFGFPRELTCAAWNDPNSPLRGAK GKDSTTTESYVPYGVIENSFLTGLNPLESFVHSVTSRDSSFSGNADLPGTLSRRLMFFMR DIYAAYDGTVRNSFGNQLVQFTYETDGPVEDITGEALGSLSACALSEAAYSALDQPISLL ETSPLLNLKNVLECGSKKGQREQTMSLYLSEYLSKKKHGFEYGSLEIKNHLEKLSFSEIV STSMIIFSPSSNTKVPLSPWVCHFHISEKVLKRKQLSAESVVSSLNEQYKSRNRELKLDI VDLDIQNTNHCSSDDQAMKDDNVCITVTVVEASKHSVLELDAIRLVLIPFLLDSPVKGDQ GIKKVNILWTDRPKAPKRNGNHLAGELYLKVTMYGDRGKRNCWTALLETCLPIMDMIDWG RSHPDNIRQCCSVYGIDAGRSIFVANLESAVSDTGKEILREHLLLVADSLSVTGEFVALN AKGWSKQRQVESTPAPFTQACFSSPSQCFLKAAKEGVRDDLQGSIDALAWGKVPGFGTGD QFEIIISPKVHGFTTPVDVYDLLSSTKTMRRTNSAPKSDKATVQPFGLLHSAFLKDIKVL DGKGIPMSLLRTIFTWKNIELLSQSLKRILHSYEINELLNERDEGLVKMVLQLHPNSVEK IGPGVKGIRVAKSKHGDSCCFEVVRIDGTFEDFSYHKCVLGATKIIAPKKMNFYKSKYLK NGTLESGGFSENP

Transcript Sequence

Transcript ID	AT1G63020.1
Transcript Infomation	\| nuclear RNA polymerase D1A \| Chr1:23354947-23362564 REVERSE LENGTH=5018 \| 201606
Sequence	TTGGACTTAGAGAAGAGTTTTTTTTTCGTTTTCTCTGCTTTCTCACTTTTTCCCGTTTCC TTTGGGAATACAAACGGCGGCTTCTCAAAAGCCTCCGATTTCGATTTTTTTTTCCTCTCT TTTTTTTTGTTCTTTCTTTAGAGTCTCTTCTTCAACTTCTTCTCCGGCATCTTCCGTCGG AGCTAAGGATCAGAAGTTTTTGTCTGTGCACTGTTTCAATTGGATCATTACATAGTGAGG ATTCTCTGTTCGACGAAACGAGAAACTCTTCAACATGGAAGACGATTGTGAGGAGCTTCA GGTTCCCGTGGGAACTCTAACCTCGATAGGTTTTAGCATTTCAAACAACAATGATCGAGA TAAAATGTCTGTGCTAGAGGTTGAAGCACCGAATCAGGTGACTGATTCTCGGCTAGGATT ACCGAATCCGGATTCTGTCTGCAGAACCTGTGGCAGCAAAGATCGAAAAGTTTGCGAAGG GCATTTCGGGGTTATAAACTTCGCGTACTCGATAATAAACCCGTATTTCCTCAAGGAGGT AGCTGCGTTGTTAAACAAAATCTGTCCGGGGTGTAAATACATTCGAAAAAAGCAGTTTCA GATTACCGAAGACCAGCCTGAGAGATGTAGATACTGCACTTTGAATACCGGTTATCCTCT AATGAAGTTTAGGGTAACTACTAAAGAAGTCTTCAGGCGATCCGGAATCGTTGTTGAAGT AAACGAAGAGAGTCTGATGAAACTCAAGAAACGGGGAGTGTTAACATTGCCTCCTGACTA TTGGAGTTTTTTGCCGCAAGACTCTAATATCGACGAGAGCTGTTTGAAACCAACAAGGCG AATAATAACGCATGCACAGGTTTATGCTCTGTTATTAGGGATTGATCAGAGGCTCATCAA GAAGGATATCCCTATGTTCAACTCTCTTGGTCTGACATCTTTTCCTGTTACACCAAATGG TTACCGTGTAACCGAAATAGTTCATCAGTTCAACGGAGCTCGGCTAATATTTGATGAACG GACTCGGATCTACAAGAAACTAGTCGGCTTTGAGGGAAACACACTTGAATTGAGTTCTCG TGTGATGGAATGCATGCAATATTCCAGACTCTTTTCGGAAACTGTGTCTTCGAGTAAAGA TTCCGCAAATCCGTACCAGAAGAAGTCTGATACACCAAAACTTTGCGGTCTAAGGTTCAT GAAAGACGTGCTGCTCGGTAAAAGAAGTGATCATACATTCCGGACAGTAGTTGTTGGTGA TCCGTCCTTGAAGCTCAACGAGATTGGCATACCCGAGAGTATCGCAAAAAGGCTTCAAGT ATCAGAGCATCTCAACCAGTGCAATAAAGAAAGGCTTGTCACTTCCTTTGTCCCCACACT GTTGGACAATAAAGAGATGCATGTGAGAAGAGGAGATAGATTGGTGGCTATTCAAGTCAA TGACCTCCAAACCGGAGACAAAATATTCCGGAGTTTAATGGATGGAGACACTGTGCTGAT GAACAGACCGCCTTCGATTCATCAGCATTCGCTTATTGCAATGACAGTTAGAATCCTCCC AACGACTTCTGTTGTCTCCTTGAACCCGATCTGCTGTTTGCCGTTCCGTGGTGATTTTGA TGGAGATTGTCTCCACGGTTACGTTCCTCAGTCCATTCAAGCAAAGGTCGAGCTTGATGA GCTTGTTGCTTTGGATAAGCAGCTTATCAACAGACAGAATGGTCGGAACTTGCTTTCTTT AGGACAAGATAGCTTGACGGCGGCTTATCTGGTCAATGTTGAGAAGAACTGTTATCTTAA TCGAGCTCAGATGCAGCAGCTTCAAATGTATTGCCCATTTCAGCTTCCTCCGCCTGCAAT TATCAAAGCTTCTCCTTCGAGCACTGAGCCTCAATGGACGGGAATGCAGCTATTCGGAAT GCTGTTTCCTCCCGGGTTTGACTACACTTATCCTCTGAATAATGTAGTTGTGAGTAACGG CGAGCTTTTGTCTTTCTCTGAAGGATCTGCTTGGCTCAGAGATGGAGAAGGGAATTTCAT CGAGAGATTGCTCAAACACGACAAAGGGAAAGTTCTTGATATCATCTATTCCGCTCAAGA AATGCTATCTCAGTGGTTGCTGATGCGCGGTTTGAGTGTGTCCTTGGCGGATTTGTACCT TTCCTCTGATCTGCAGTCTCGAAAAAACTTGACTGAAGAGATATCATACGGGTTGCGGGA AGCTGAGCAAGTTTGCAACAAGCAACAGCTAATGGTTGAATCTTGGAGAGATTTCCTTGC AGTTAATGGGGAGGATAAGGAAGAGGATTCAGTATCGGATTTGGCCCGATTCTGCTATGA GAGACAAAAATCCGCTACATTAAGCGAACTTGCAGTCAGTGCTTTTAAGGATGCTTACAG AGATGTTCAGGCACTAGCATATAGGTATGGTGATCAATCCAACTCTTTTTTGATCATGTC GAAAGCCGGCAGCAAAGGGAATATCGGGAAGCTGGTTCAGCACAGCATGTGTATCGGTCT GCAGAATTCAGCAGTTTCTTTGTCCTTTGGGTTTCCGCGTGAACTGACTTGCGCTGCTTG GAATGACCCGAACAGTCCACTTCGTGGCGCAAAGGGAAAAGACAGTACCACTACTGAGTC ATATGTTCCTTATGGAGTCATTGAGAACTCGTTTCTAACGGGTCTGAATCCATTGGAATC TTTTGTTCATTCAGTTACAAGTCGTGACAGTTCATTCAGTGGTAATGCTGATCTCCCGGG GACACTGAGCAGAAGATTAATGTTCTTCATGCGGGACATATACGCTGCTTATGATGGCAC TGTGAGAAATTCTTTCGGAAACCAGTTAGTCCAGTTTACTTATGAGACTGATGGTCCCGT TGAAGATATCACAGGTGAGGCACTTGGCTCACTTTCTGCTTGTGCATTATCTGAGGCAGC TTACAGCGCGCTGGACCAGCCAATCAGCCTTCTTGAAACTTCGCCGCTTCTGAATCTTAA GAATGTATTGGAGTGTGGATCAAAGAAAGGTCAACGAGAACAGACAATGTCTTTGTATTT GTCTGAATACCTTTCAAAGAAAAAGCACGGGTTCGAATACGGGTCACTTGAGATCAAGAA CCACTTGGAGAAACTTAGTTTCTCAGAGATCGTTTCAACATCTATGATAATATTCTCTCC AAGTTCTAACACGAAAGTACCGTTAAGCCCGTGGGTTTGCCATTTTCATATCTCTGAGAA AGTACTGAAGCGGAAACAACTGAGCGCAGAATCCGTTGTTTCATCTTTAAACGAGCAGTA CAAGAGCAGGAACAGAGAACTGAAGCTTGATATAGTTGACTTAGATATACAAAACACAAA CCACTGCTCTTCAGACGATCAGGCAATGAAGGATGATAACGTTTGCATCACGGTGACTGT AGTTGAAGCCTCAAAGCACTCGGTTTTGGAACTGGATGCTATTCGTCTCGTTTTGATCCC TTTTCTTCTTGACTCTCCTGTCAAAGGTGATCAAGGGATCAAAAAGGTGAATATTTTGTG GACTGACCGACCAAAAGCGCCAAAAAGGAATGGGAATCATTTGGCGGGTGAGCTGTACTT GAAGGTTACAATGTATGGAGATCGGGGCAAAAGAAACTGTTGGACCGCTCTTTTAGAAAC CTGCCTTCCCATCATGGATATGATTGACTGGGGCCGAAGCCATCCTGATAATATCCGACA ATGCTGCTCAGTTTATGGAATAGATGCTGGACGCAGCATTTTCGTAGCAAATTTGGAGTC CGCGGTGTCAGATACTGGTAAGGAGATACTAAGAGAGCATCTGCTTCTCGTAGCTGATAG TCTCTCTGTTACGGGAGAGTTTGTGGCATTAAACGCCAAAGGTTGGAGTAAACAAAGACA GGTCGAGTCCACGCCTGCACCTTTTACTCAAGCATGCTTCTCAAGCCCAAGTCAATGCTT TCTCAAAGCTGCTAAGGAAGGTGTCAGAGACGATCTTCAAGGGTCTATCGACGCTTTAGC TTGGGGAAAAGTTCCTGGTTTCGGAACTGGAGATCAGTTCGAAATCATCATTTCGCCAAA GGTTCACGGGTTTACTACACCGGTAGATGTGTATGACCTTTTGAGTAGTACAAAGACGAT GCGTAGAACAAACTCTGCGCCTAAATCAGACAAAGCCACGGTCCAGCCTTTTGGCTTGCT ACATTCCGCATTCCTGAAAGATATCAAGGTACTCGATGGGAAAGGGATTCCTATGTCACT GCTTAGAACGATCTTTACATGGAAAAACATCGAGTTGCTTTCCCAGTCATTGAAACGCAT TCTCCACAGTTACGAGATCAATGAACTGTTGAATGAGAGGGACGAAGGACTTGTGAAGAT GGTTCTGCAGTTGCACCCCAACAGTGTTGAGAAAATTGGACCAGGCGTCAAAGGAATCCG GGTCGCTAAATCGAAGCACGGAGATTCTTGTTGCTTCGAGGTTGTAAGAATAGACGGGAC ATTCGAAGACTTCTCATACCACAAGTGTGTCTTGGGAGCAACAAAGATAATTGCCCCAAA GAAAATGAACTTCTACAAGTCAAAGTATCTTAAAAATGGTACACTCGAGTCCGGTGGTTT CTCCGAAAACCCGTGAACAGCCAAGTAAGAGTAAAAAAAAAGACTGGCTCTTCTGCGGTA TAATATCGAACAATGTATGAAGTTGTGTGTAATTTTGTTTAAAAAGTGATTAGATAGATA TAGGGGAAAAGCCTTTTGGCTTTGCTCTAAGCTTCTTTTTGCTCCTTTCACTATGTAATA CCTTTTGCCTTCCACCTAAAGGCTTAAAGGTTAATTACTTAGTGGAAGCAGCAACGAGAA GCTGGCAAAGGAGGCTTCTGTTCTGTTTCTGTTTCTGTATGTAAACCATGCAAATTCCGG TTTGACTATGAAATATCCGGTTATGTTTCTGTTCTTTACCTTGTTTATATCCGTCTTCAT GCAATTGCAAATGATCCTTATTACATCTTCGGTTTTCC