Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G60995.1
CDS Infomation	\| S3 self-incompatibility locus-linked pollen protein \| Chr1:22465768-22470575 REVERSE LENGTH=1872 \| 201606
Sequence	ATGGATCCGGAGCAGACGTTTATTAGGGTTCAGGAGAGGTTTTCGCAGATCTTAACGCCA AGGATTAGAGGTTTCTTAGAGTATACTTACCTCTTCGTTGCCATCACTTTGTTCTGTATC CTCGTTGTTATGCACGCCAATTATGTTCAGCAGCCTGGTTGTTCAAGTGAGCTGACTGGA GTTGAGTTAGCTGAAGCAGAGCTTATGCAAATCAAGATAACAAGTGCAGGGTTGTGGTCA CGTAATGATGAAAGTACTGCTGCAGATGTTCCTCGAGTTGTTGCTGCAACTGATAGTTTA GAAGTGTCAAAGACTGATCAAGAAAGCTCTACCAGTGAAGAAAATACCGATGATACATTT GTGAAAATTGATAAGGAAGAGCCCCGCAGTAGTTTCTCAGTGTCTGCAAAAGAGAATGTC AGAGCAGCTATTCTTCGCTTTCTTAAAAAGTGTTACAGGCGCATATCTTTCGTTTTACAG CATACAGCACGGATCCTCAGAGGTGTTAGAAAAATATGGAACATCATTGGCATACCGCTA AATCTTGATGTGCCCAAATTGTTGCATGTACTGTATATGGATAAAGTCAACTACTATGCA GTTCAGTGGCTTGAGAGTAAAACTCAAGAGTTTGAGCCAACATATCTATATACCATGGAA AAGGGTTACTTCTTGCTGCCTGATGAAGCAAAATCACGGCATAACATTCGCACTGCAAAT GTCAGCATATCGGCACGGCATCCCTGCTTTGGCAACAGGTGGCAGCAACTTCTTATAAAC AGAGTTGTTGGATATGATACTATTATAATGAATAGCTTACAGAACTCTGCTGGTCAAGGT TATCTATACAACTACCAGACAAGAGAATTTTACAATCTCAGTTACTCCCAAGAACTTCCT GACGGTTCTGCGCATTTCGGAGATTACTTGGTGACGAAATGTGGTGTCCTAATGATGTCA CTTTTTGTGTTTTTCACAACCACAATGTCTGTATCATTCACATTGCGAGAGACACAAACT CGCATGTTGAAGTTTACAGTGCAGCTTCAACACCATGCCCAGCATCGGTTACCAACATTT CAGTTGATCTTTGTACACGTGATCGAATCGCTTGTCTTTGTACCGATTATGATTGGGATT TTGTTCTTCCTGTTTGAGTTTTACGACGATCAGCTATTGGCTTTTATGGTTCTAGTTCTT GTCTGGCTTTGCGAATTATTCACCCTGATAAGTGTCAGGACACCAATATCGATGAAGTTC TTCCCGCGTTTCTTCTTGCTGTACTTCTTGGTGTTCCATATTTATTTCTTCTCATATGCA TATGGTTTTTCTTATCTCGCCCTAATGACAACCGCTGCATTCATGCAACACTTAATTTTA TACTTCTGGAACCGTTTTGAGGTACCAGCTCTTCAGAGGTTCCTTCAAAGCCGACAGTCA CACCTTCAGCAACACCCAGACTTTCACATCACTTCCTCAACAATCCTAGCATCAACTCTT CACATCACAAGGCTGAACAGAACAACAAGAAACCGAACTCCGTCTGGTCCTAACCACACA ACCCCAAACCAAAACACGGAAACAAGATCTTTTACAGCGGATGGAGGAGGTGTCGGGAAT CCGGCACAATATCAAGAGCAGCAAGAAGAGAATGAAGCAAACACCGTTCCTGCAGAGCCT AACCCACAACAAGCAGGCGCAATGAGCTCGTTCAGCTCGATGCTTCTATGGATTTTAGGC GGGGCTTCGTCAGAAGGACTTAACTCGTTTCTTTCGATGTTTAGAGATGTGAGAGATGAA GATGAAGCACAAGTGTTTGCAGATACTAGTCCACCTCAAAACCCGCATCATGATCCTCTT TCAGTTGATTAA

Peptide Sequence

PEP ID	AT1G60995.1
PEP Infomation	\| S3 self-incompatibility locus-linked pollen protein \| Chr1:22465768-22470575 REVERSE LENGTH=623 \| 201606
Sequence	MDPEQTFIRVQERFSQILTPRIRGFLEYTYLFVAITLFCILVVMHANYVQQPGCSSELTG VELAEAELMQIKITSAGLWSRNDESTAADVPRVVAATDSLEVSKTDQESSTSEENTDDTF VKIDKEEPRSSFSVSAKENVRAAILRFLKKCYRRISFVLQHTARILRGVRKIWNIIGIPL NLDVPKLLHVLYMDKVNYYAVQWLESKTQEFEPTYLYTMEKGYFLLPDEAKSRHNIRTAN VSISARHPCFGNRWQQLLINRVVGYDTIIMNSLQNSAGQGYLYNYQTREFYNLSYSQELP DGSAHFGDYLVTKCGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFTVQLQHHAQHRLPTF QLIFVHVIESLVFVPIMIGILFFLFEFYDDQLLAFMVLVLVWLCELFTLISVRTPISMKF FPRFFLLYFLVFHIYFFSYAYGFSYLALMTTAAFMQHLILYFWNRFEVPALQRFLQSRQS HLQQHPDFHITSSTILASTLHITRLNRTTRNRTPSGPNHTTPNQNTETRSFTADGGGVGN PAQYQEQQEENEANTVPAEPNPQQAGAMSSFSSMLLWILGGASSEGLNSFLSMFRDVRDE DEAQVFADTSPPQNPHHDPLSVD

Transcript Sequence

Transcript ID	AT1G60995.1
Transcript Infomation	\| S3 self-incompatibility locus-linked pollen protein \| Chr1:22465571-22470839 REVERSE LENGTH=2333 \| 201606
Sequence	GCAAAAGAATCCTATCGCTTTCCCAATTGCGCCACTCTCACTAGGGATTTTTGAAGAAAA ATAAAAACAATTTAACAGCAAACAAAGTGTAAAATTTGCTTCGCGGTGCTTTTCTTTTCA ATCATCTTCACTCTTCAATTTCTGTGGATTCGACAATCTCCCAGAACGAGAAGAAATCTA CGATCCTCGCAACGGAGCAATTCAAATTCGATGACTACGTAGTGTTAACGAAGAAGACGA AAAAGTGCATCGGAGATCCGAAATATGGATCCGGAGCAGACGTTTATTAGGGTTCAGGAG AGGTTTTCGCAGATCTTAACGCCAAGGATTAGAGGTTTCTTAGAGTATACTTACCTCTTC GTTGCCATCACTTTGTTCTGTATCCTCGTTGTTATGCACGCCAATTATGTTCAGCAGCCT GGTTGTTCAAGTGAGCTGACTGGAGTTGAGTTAGCTGAAGCAGAGCTTATGCAAATCAAG ATAACAAGTGCAGGGTTGTGGTCACGTAATGATGAAAGTACTGCTGCAGATGTTCCTCGA GTTGTTGCTGCAACTGATAGTTTAGAAGTGTCAAAGACTGATCAAGAAAGCTCTACCAGT GAAGAAAATACCGATGATACATTTGTGAAAATTGATAAGGAAGAGCCCCGCAGTAGTTTC TCAGTGTCTGCAAAAGAGAATGTCAGAGCAGCTATTCTTCGCTTTCTTAAAAAGTGTTAC AGGCGCATATCTTTCGTTTTACAGCATACAGCACGGATCCTCAGAGGTGTTAGAAAAATA TGGAACATCATTGGCATACCGCTAAATCTTGATGTGCCCAAATTGTTGCATGTACTGTAT ATGGATAAAGTCAACTACTATGCAGTTCAGTGGCTTGAGAGTAAAACTCAAGAGTTTGAG CCAACATATCTATATACCATGGAAAAGGGTTACTTCTTGCTGCCTGATGAAGCAAAATCA CGGCATAACATTCGCACTGCAAATGTCAGCATATCGGCACGGCATCCCTGCTTTGGCAAC AGGTGGCAGCAACTTCTTATAAACAGAGTTGTTGGATATGATACTATTATAATGAATAGC TTACAGAACTCTGCTGGTCAAGGTTATCTATACAACTACCAGACAAGAGAATTTTACAAT CTCAGTTACTCCCAAGAACTTCCTGACGGTTCTGCGCATTTCGGAGATTACTTGGTGACG AAATGTGGTGTCCTAATGATGTCACTTTTTGTGTTTTTCACAACCACAATGTCTGTATCA TTCACATTGCGAGAGACACAAACTCGCATGTTGAAGTTTACAGTGCAGCTTCAACACCAT GCCCAGCATCGGTTACCAACATTTCAGTTGATCTTTGTACACGTGATCGAATCGCTTGTC TTTGTACCGATTATGATTGGGATTTTGTTCTTCCTGTTTGAGTTTTACGACGATCAGCTA TTGGCTTTTATGGTTCTAGTTCTTGTCTGGCTTTGCGAATTATTCACCCTGATAAGTGTC AGGACACCAATATCGATGAAGTTCTTCCCGCGTTTCTTCTTGCTGTACTTCTTGGTGTTC CATATTTATTTCTTCTCATATGCATATGGTTTTTCTTATCTCGCCCTAATGACAACCGCT GCATTCATGCAACACTTAATTTTATACTTCTGGAACCGTTTTGAGGTACCAGCTCTTCAG AGGTTCCTTCAAAGCCGACAGTCACACCTTCAGCAACACCCAGACTTTCACATCACTTCC TCAACAATCCTAGCATCAACTCTTCACATCACAAGGCTGAACAGAACAACAAGAAACCGA ACTCCGTCTGGTCCTAACCACACAACCCCAAACCAAAACACGGAAACAAGATCTTTTACA GCGGATGGAGGAGGTGTCGGGAATCCGGCACAATATCAAGAGCAGCAAGAAGAGAATGAA GCAAACACCGTTCCTGCAGAGCCTAACCCACAACAAGCAGGCGCAATGAGCTCGTTCAGC TCGATGCTTCTATGGATTTTAGGCGGGGCTTCGTCAGAAGGACTTAACTCGTTTCTTTCG ATGTTTAGAGATGTGAGAGATGAAGATGAAGCACAAGTGTTTGCAGATACTAGTCCACCT CAAAACCCGCATCATGATCCTCTTTCAGTTGATTAAAGTTTTTTTTTTCTTTGTTTGCTG TATATTTTGTATTTTTGGCCTCTGGTTTTTGTTCCTTGTTTGCTTGTATAGTCACTGGCC AAAAACAGACTAGCTTTTGAAATATTAAGGTGATCAAAAATTGGTAAAGAAGGGAGAAAA AAAAATGATTCTGAAAAGCTTTTGAGAAAATGTGGTAAAGTCATAATTTTCGC