Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G60390.1
CDS Infomation	\| polygalacturonase 1 \| Chr1:22247611-22249556 REVERSE LENGTH=1875 \| 201606
Sequence	ATGAACAATATTGAAGCAACTCTATTCCTCTGCTTCTTCTGCATCTTCTCATCTTCTAAT GTGCATTTCGCCGGAGCTAAACAAACCGCCGGCAACATCACGCCATCGGAGAATCCATTC ACACCAAAAGCTTCTTTGATTCGTTATTGGAACAATCACATCAATGGCGATTCACCAAAA CCTTCTTTTTTCCTCTCAAAGGCCTCTCCTCTAACCGCCGTGGACTCCACGCGTTTCGCC TCACTCGCTTCTAATCACGCGCTTAACACGCATCACTCTGATTTCTGCTCCGCCGCGAAA CTCTTCTGCTTCCCTGAGCTCGCCGCTCATTCCCTGGAAAAACACGGCGATGACGTCAAC TTCGCCGCTTACAGCGGCAAGAACTTCACAAACTACGGCTCCGACCGTCTCTCCGGAGCA GACTCATTCAAAAACTATTCCGGCGGTGACAACATCGCCGTAGACTCATTCCGACGTTAC AGCCGAAACTCCGCCGGACACGACGATGGATTTACAAATTACGCCGGAGAAGTAAACGTA GCTGACCAAAGCTTCACAACTTACGCCACCGGAACAACAGGAGGCTCCGGCGAATTCACG AACTACAACACAGACGCAAACGAACCAAACGGAAGATTCACTTCTTACTCCGATAAAGCC AACGGAAGATCACAAACCTTCACTACCTACTCCGAGAACGGCAACACCGGATATCAATCA TTCACAAGCTACAGCAAAAACGGAAACGGAGCTCCGAATGAGTTCTCGGGTTACGGAACC GGGTCAAACGTAGTTAATACGGGTTTTACCAAATACGGAGAATCCGCTAACGGAGCTAAC GACAGTTTCACGAGCTACGGAGAAAACGGTAATGTTCCGGTTAACGAATTTAAAGGATAC GGTGACGGAGGTAACGGCGCCGTTTATGGGTTTAAAAATTACAGAGACCAATCAAACATC GGAGTTGATTCTTTCTCTTCTTACGCTAAAAACTCAAACAACGAGAAGGTCAATTTCGTA AATTACGGTAAATCTTTTAACCTTGGCTCTGATAATTTCACCGGTTACGGCCAAGATAAC GTCGGAGGTAACGTCAGCTTCAAAACTTACGGCCAAGGACAGAGTTTTAAGGTTTACACT AAAGACGGCGTCGTTTTTGCGCGTTATTCTAATAATGTGAGTTCTAATGGCAAAACGGTG AATAAGTGGGTTGAGGAGGGTAAATTCTTCAGAGAAGCGATGTTGAAAGAAGGGACTTTG ATGCAAATGCCGGATATTAAAGATAAAATGCCTAAAAGGACATTTTTACCCCGAAACATA GTTAAGAATTTACCGTTTTCGTCATCTACGATCGGAGAGATTTGGAGGGTTTTTGGTGCC GGTGAGAATTCATCAATGGCGGGGATAATCTCGTCGGCGGTTTCAGAGTGTGAGAGACCG GCGAGTCACGGTGAGACAAAGCGGTGTGTTGGATCAGCGGAGGATATGATAGATTTCGCT ACGTCGGTGCTCGGACGCGGCGTAGTGGTGAGGACGACGGAAAATGTTGTCGGGTCAAAG AAGAAGGTCGTCATTGGAAAAGTCAATGGAATCAACGGTGGAGATGTAACAAGAGCAGTT TCGTGTCACCAGAGTTTGTACCCGTATTTACTGTATTATTGTCACTCGGTTCCTCGGGTA CGTGTTTATGAAACGGATCTACTTGACCCGAAGAGTTTAGAGAAGATTAACCATGGTGTT GCCATCTGTCACATTGATACGTCAGCTTGGAGTCCGAGTCATGGAGCGTTTTTGGCTTTA GGTTCTGGTCCGGGTCAGATTGAAGTTTGCCATTGGATCTTTGAGAATGATATGACGTGG AATATTATTGATTAA

Peptide Sequence

PEP ID	AT1G60390.1
PEP Infomation	\| polygalacturonase 1 \| Chr1:22247611-22249556 REVERSE LENGTH=624 \| 201606
Sequence	MNNIEATLFLCFFCIFSSSNVHFAGAKQTAGNITPSENPFTPKASLIRYWNNHINGDSPK PSFFLSKASPLTAVDSTRFASLASNHALNTHHSDFCSAAKLFCFPELAAHSLEKHGDDVN FAAYSGKNFTNYGSDRLSGADSFKNYSGGDNIAVDSFRRYSRNSAGHDDGFTNYAGEVNV ADQSFTTYATGTTGGSGEFTNYNTDANEPNGRFTSYSDKANGRSQTFTTYSENGNTGYQS FTSYSKNGNGAPNEFSGYGTGSNVVNTGFTKYGESANGANDSFTSYGENGNVPVNEFKGY GDGGNGAVYGFKNYRDQSNIGVDSFSSYAKNSNNEKVNFVNYGKSFNLGSDNFTGYGQDN VGGNVSFKTYGQGQSFKVYTKDGVVFARYSNNVSSNGKTVNKWVEEGKFFREAMLKEGTL MQMPDIKDKMPKRTFLPRNIVKNLPFSSSTIGEIWRVFGAGENSSMAGIISSAVSECERP ASHGETKRCVGSAEDMIDFATSVLGRGVVVRTTENVVGSKKKVVIGKVNGINGGDVTRAV SCHQSLYPYLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHIDTSAWSPSHGAFLAL GSGPGQIEVCHWIFENDMTWNIID

Transcript Sequence

Transcript ID	AT1G60390.1
Transcript Infomation	\| polygalacturonase 1 \| Chr1:22247472-22249721 REVERSE LENGTH=2179 \| 201606
Sequence	TGATAAAAATAAAAAATAAACTGTAGTTCTAAAATTTTATAATTATGACTCACTTCATAG TGAAGTCTCGATAGACTCTCTCTTCATGAAATCATAGTGAAATCTCATTACTCTCTCTTC ATCTTATTTCTTCTTCTCAACCAACAAATCTCTCTCACCAAGAAGATGAACAATATTGAA GCAACTCTATTCCTCTGCTTCTTCTGCATCTTCTCATCTTCTAATGTGCATTTCGCCGGA GCTAAACAAACCGCCGGCAACATCACGCCATCGGAGAATCCATTCACACCAAAAGCTTCT TTGATTCGTTATTGGAACAATCACATCAATGGCGATTCACCAAAACCTTCTTTTTTCCTC TCAAAGGCCTCTCCTCTAACCGCCGTGGACTCCACGCGTTTCGCCTCACTCGCTTCTAAT CACGCGCTTAACACGCATCACTCTGATTTCTGCTCCGCCGCGAAACTCTTCTGCTTCCCT GAGCTCGCCGCTCATTCCCTGGAAAAACACGGCGATGACGTCAACTTCGCCGCTTACAGC GGCAAGAACTTCACAAACTACGGCTCCGACCGTCTCTCCGGAGCAGACTCATTCAAAAAC TATTCCGGCGGTGACAACATCGCCGTAGACTCATTCCGACGTTACAGCCGAAACTCCGCC GGACACGACGATGGATTTACAAATTACGCCGGAGAAGTAAACGTAGCTGACCAAAGCTTC ACAACTTACGCCACCGGAACAACAGGAGGCTCCGGCGAATTCACGAACTACAACACAGAC GCAAACGAACCAAACGGAAGATTCACTTCTTACTCCGATAAAGCCAACGGAAGATCACAA ACCTTCACTACCTACTCCGAGAACGGCAACACCGGATATCAATCATTCACAAGCTACAGC AAAAACGGAAACGGAGCTCCGAATGAGTTCTCGGGTTACGGAACCGGGTCAAACGTAGTT AATACGGGTTTTACCAAATACGGAGAATCCGCTAACGGAGCTAACGACAGTTTCACGAGC TACGGAGAAAACGGTAATGTTCCGGTTAACGAATTTAAAGGATACGGTGACGGAGGTAAC GGCGCCGTTTATGGGTTTAAAAATTACAGAGACCAATCAAACATCGGAGTTGATTCTTTC TCTTCTTACGCTAAAAACTCAAACAACGAGAAGGTCAATTTCGTAAATTACGGTAAATCT TTTAACCTTGGCTCTGATAATTTCACCGGTTACGGCCAAGATAACGTCGGAGGTAACGTC AGCTTCAAAACTTACGGCCAAGGACAGAGTTTTAAGGTTTACACTAAAGACGGCGTCGTT TTTGCGCGTTATTCTAATAATGTGAGTTCTAATGGCAAAACGGTGAATAAGTGGGTTGAG GAGGGTAAATTCTTCAGAGAAGCGATGTTGAAAGAAGGGACTTTGATGCAAATGCCGGAT ATTAAAGATAAAATGCCTAAAAGGACATTTTTACCCCGAAACATAGTTAAGAATTTACCG TTTTCGTCATCTACGATCGGAGAGATTTGGAGGGTTTTTGGTGCCGGTGAGAATTCATCA ATGGCGGGGATAATCTCGTCGGCGGTTTCAGAGTGTGAGAGACCGGCGAGTCACGGTGAG ACAAAGCGGTGTGTTGGATCAGCGGAGGATATGATAGATTTCGCTACGTCGGTGCTCGGA CGCGGCGTAGTGGTGAGGACGACGGAAAATGTTGTCGGGTCAAAGAAGAAGGTCGTCATT GGAAAAGTCAATGGAATCAACGGTGGAGATGTAACAAGAGCAGTTTCGTGTCACCAGAGT TTGTACCCGTATTTACTGTATTATTGTCACTCGGTTCCTCGGGTACGTGTTTATGAAACG GATCTACTTGACCCGAAGAGTTTAGAGAAGATTAACCATGGTGTTGCCATCTGTCACATT GATACGTCAGCTTGGAGTCCGAGTCATGGAGCGTTTTTGGCTTTAGGTTCTGGTCCGGGT CAGATTGAAGTTTGCCATTGGATCTTTGAGAATGATATGACGTGGAATATTATTGATTAA GGTTTAGGTCATTTTTGGCCTTTTGTGGTACATTTTTTTTTTTAGTTTGAGATTTGCTTC ATCCGGTTTTTTTATTTTCTGCAAAATATGTCACTCTCTCCCATTTTGTTCATATATAAT ATGTTTGAAGTTTGATCAA