Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G58340.1
CDS Infomation	\| MATE efflux family protein \| Chr1:21653162-21655117 FORWARD LENGTH=1599 \| 201606
Sequence	ATGTGTAATTCAAAACCATCTTCTGCTTCATCTTCCTTATTATCTTGTAAAGACAAAACC CATATCTCAAAACTCGAAACCTGTGATACAGATAATCCTCATTATTCTGAATTCAGGGAT ACTGATTCTCTAGACCTTAAAAGATGGCCAAGTTTTCTGGAGGGCTTAGAGGAAGTGAAG GCGATCGGAAAAATCTCTGGGCCGACGGCGATGACCGGGCTTCTTATGTACTCAAGAGCG ATGATATCGATGCTGTTCTTAGGCTACCTCGGTGAGCTTGAGTTAGCCGGAGGATCTCTC TCCATAGGCTTTGCCAATATCACCGGCTACTCCGTCATCTCCGGTTTGTCCATGGGGATG GAACCAATCTGTGGCCAAGCATACGGAGCTAAACAAATGAAGCTTTTAGGACTAACCCTT CAAAGAACCGTCCTCCTACTCCTCTCCTGCTCGGTCCCTATCTCCTTCTCGTGGCTCAAC ATGCGCCGAATCCTCTTATGGTGCGGCCAAGATGAAGAGATCTCCTCTGTTGCTCAACAG TTCCTTCTATTCGCCATCCCTGACCTCTTCCTTCTCTCTCTGCTTCACCCTCTTCGAATT TACCTCCGAACACAAAACATTACATTGCCCGTGACTTACTCCACGGCCGTGTCCGTTCTC CTCCACGTTCCTTTGAACTACCTCCTAGTGGTGAAACTTGAGATGGGAGTAGCGGGAGTC GCTATAGCTATGGTTTTGACAAATCTCAACCTTGTAGTCCTCTTATCCTCTTTTGTGTAT TTCACTAGCGTGCATAGTGATACATGGGTCCCAATTACTATTGACTCTCTTAAAGGTTGG TCGGCTTTGCTCTCACTTGCCATACCCACTTGTGTATCTGTTTGTTTGGAGTGGTGGTGG TACGAGTTTATGATCATTTTGTGTGGACTTTTGGCTAACCCAAGAGCCACCGTGGCTTCC ATGGGAATCTTGATCCAAACGACGGCTTTGGTCTACGTCTTCCCATCCTCTCTCAGCCTT GGTGTCTCTACAAGAATTAGCAACGAGCTTGGGGCTAAACGTCCGGCGAAAGCTCGGGTA TCCATGATCATCTCACTCTTCTGCGCGATCGCCTTAGGCCTAATGGCGATGGTGTTTGCT GTGCTGGTTAGGCACCATTGGGGACGCTTGTTTACCACGGATGCAGAGATTCTTCAGCTG ACTTCCATCGCATTACCCATTGTGGGGTTATGTGAGCTCGGAAACTGTCCTCAAACAACC GGTTGTGGGGTTTTAAGAGGCTGTGCAAGACCTACACTTGGTGCCAACATAAACTTGGGT TCATTTTACTTTGTGGGCATGCCAGTCGCTATTCTGTTTGGGTTTGTTTTCAAACAAGGG TTTCCAGGTCTCTGGTTCGGGTTGCTTGCAGCTCAAGCAACTTGTGCTTCTCTCATGTTG TGTGCACTTTTGAGAACAGATTGGAAAGTCCAAGCCGAGAGAGCTGAAGAGCTGACGTCA CAAACTCCCGGAAAGTCTCCGCCCCTTCTCCCCATCGCAAGCTCAAAGAGCCGGTCTACC TCCGGTACAGAAGATATGATGAGAACCATGTTGGTTTAG

Peptide Sequence

PEP ID	AT1G58340.1
PEP Infomation	\| MATE efflux family protein \| Chr1:21653162-21655117 FORWARD LENGTH=532 \| 201606
Sequence	MCNSKPSSASSSLLSCKDKTHISKLETCDTDNPHYSEFRDTDSLDLKRWPSFLEGLEEVK AIGKISGPTAMTGLLMYSRAMISMLFLGYLGELELAGGSLSIGFANITGYSVISGLSMGM EPICGQAYGAKQMKLLGLTLQRTVLLLLSCSVPISFSWLNMRRILLWCGQDEEISSVAQQ FLLFAIPDLFLLSLLHPLRIYLRTQNITLPVTYSTAVSVLLHVPLNYLLVVKLEMGVAGV AIAMVLTNLNLVVLLSSFVYFTSVHSDTWVPITIDSLKGWSALLSLAIPTCVSVCLEWWW YEFMIILCGLLANPRATVASMGILIQTTALVYVFPSSLSLGVSTRISNELGAKRPAKARV SMIISLFCAIALGLMAMVFAVLVRHHWGRLFTTDAEILQLTSIALPIVGLCELGNCPQTT GCGVLRGCARPTLGANINLGSFYFVGMPVAILFGFVFKQGFPGLWFGLLAAQATCASLML CALLRTDWKVQAERAEELTSQTPGKSPPLLPIASSKSRSTSGTEDMMRTMLV

Transcript Sequence

Transcript ID	AT1G58340.1
Transcript Infomation	\| MATE efflux family protein \| Chr1:21652988-21655439 FORWARD LENGTH=2095 \| 201606
Sequence	CTTTCTCCTCCAAAAGGCCCAACCAATTCCATATTAAAAATATTAGTTCCTCTCGGTTCC TTTTATCATTTGCATAAAATCGTTTTGCCTCCAAAAGACTAAAAGCTCTAGACTTTGTCT CTTTGTCCTTTTATCTCTACTCCCAACAAAACCAGTTTACTCCTCTTAAGAATCATGTGT AATTCAAAACCATCTTCTGCTTCATCTTCCTTATTATCTTGTAAAGACAAAACCCATATC TCAAAACTCGAAACCTGTGATACAGATAATCCTCATTATTCTGAATTCAGGGATACTGAT TCTCTAGACCTTAAAAGATGGCCAAGTTTTCTGGAGGGCTTAGAGGAAGTGAAGGCGATC GGAAAAATCTCTGGGCCGACGGCGATGACCGGGCTTCTTATGTACTCAAGAGCGATGATA TCGATGCTGTTCTTAGGCTACCTCGGTGAGCTTGAGTTAGCCGGAGGATCTCTCTCCATA GGCTTTGCCAATATCACCGGCTACTCCGTCATCTCCGGTTTGTCCATGGGGATGGAACCA ATCTGTGGCCAAGCATACGGAGCTAAACAAATGAAGCTTTTAGGACTAACCCTTCAAAGA ACCGTCCTCCTACTCCTCTCCTGCTCGGTCCCTATCTCCTTCTCGTGGCTCAACATGCGC CGAATCCTCTTATGGTGCGGCCAAGATGAAGAGATCTCCTCTGTTGCTCAACAGTTCCTT CTATTCGCCATCCCTGACCTCTTCCTTCTCTCTCTGCTTCACCCTCTTCGAATTTACCTC CGAACACAAAACATTACATTGCCCGTGACTTACTCCACGGCCGTGTCCGTTCTCCTCCAC GTTCCTTTGAACTACCTCCTAGTGGTGAAACTTGAGATGGGAGTAGCGGGAGTCGCTATA GCTATGGTTTTGACAAATCTCAACCTTGTAGTCCTCTTATCCTCTTTTGTGTATTTCACT AGCGTGCATAGTGATACATGGGTCCCAATTACTATTGACTCTCTTAAAGGTTGGTCGGCT TTGCTCTCACTTGCCATACCCACTTGTGTATCTGTTTGTTTGGAGTGGTGGTGGTACGAG TTTATGATCATTTTGTGTGGACTTTTGGCTAACCCAAGAGCCACCGTGGCTTCCATGGGA ATCTTGATCCAAACGACGGCTTTGGTCTACGTCTTCCCATCCTCTCTCAGCCTTGGTGTC TCTACAAGAATTAGCAACGAGCTTGGGGCTAAACGTCCGGCGAAAGCTCGGGTATCCATG ATCATCTCACTCTTCTGCGCGATCGCCTTAGGCCTAATGGCGATGGTGTTTGCTGTGCTG GTTAGGCACCATTGGGGACGCTTGTTTACCACGGATGCAGAGATTCTTCAGCTGACTTCC ATCGCATTACCCATTGTGGGGTTATGTGAGCTCGGAAACTGTCCTCAAACAACCGGTTGT GGGGTTTTAAGAGGCTGTGCAAGACCTACACTTGGTGCCAACATAAACTTGGGTTCATTT TACTTTGTGGGCATGCCAGTCGCTATTCTGTTTGGGTTTGTTTTCAAACAAGGGTTTCCA GGTCTCTGGTTCGGGTTGCTTGCAGCTCAAGCAACTTGTGCTTCTCTCATGTTGTGTGCA CTTTTGAGAACAGATTGGAAAGTCCAAGCCGAGAGAGCTGAAGAGCTGACGTCACAAACT CCCGGAAAGTCTCCGCCCCTTCTCCCCATCGCAAGCTCAAAGAGCCGGTCTACCTCCGGT ACAGAAGATATGATGAGAACCATGTTGGTTTAGATTGATAGCTATTCTCTGGAGGCATTT GCCATCAACATTGACGTACATATATGTTCTTGTCATCATTTTTTGGAGTTTATAGTGCTC CTTAATTTCTACTTTTTGATTTAAGAACGACTTTGTTTTGTGGGCTTTAGTGGTGTTTGT GTTATTTATGGTTGTATTGGTGTGATAGTTCTAATTAGCTTTGACTTCAGCAGTTTGTAT TTTATGTGTTCCCTTTTGTAATAACTCGTGGTTTGATTATCTTTATATATTTGTCCATTT TCTAGGAGAATGTGAATTTTTTTTGTTAAACTAAGAATAAATTTATTTTATTTTA