Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT1G55820.1
CDS Infomation

| lysine-specific demethylase%2C putative (DUF1296) | Chr1:20864397-20867418 FORWARD LENGTH=1728 | 201606
Sequence

ATGAGCTCCTCCGATGGCGGCTCCTCTAGGGTTTCGATTCCTTACCATCTCCGCAAAACC
CTTCAGAAAATCAGAGAGTATACCGGAAAGCAGCACTCGGATGAGGATATCTTTGCCGTC
TATAAGGATTCCTTCAATGATCCTCATGAGACCGCTCAGAAGCTCCTCTTCTTAGATACA
TTTCATGAGGTGAGAAGTAAAAGGGAGAAAAAGAAGGAGCCTATAGTGCCAGTTACACAA
CCAAGTGGCAGAGGTGGTCGGAGGAACTTTGCTTCAAGTAACTCTTATCAAGGTAGTGGA
AGAAATGCTTCTTTTAAAAGGGAAAATGGAGCTAATCATGTAACAAGAGGTTCTAGAACT
GCTCAGCCTGCCACTAACAAAGCAAGCAACATCACAGTACCTAATGAAACAAAGGTTTCT
GGTCCTGCTAGTATTCCGAGTGAGGTCAGCAATCATAAAGCTCAAGATGATCCTTCTTTG
ATTTCTGCTTCACGTTGCAGTAGCAAGTCAGATCAAGCCATTGAAATTGAGACTGCGTCC
AAACAAGGCAAAAATCAATCGCTTCCTAAGCCAGATGTTAGCGAACAGTCACACGTAACA
TTCCCTTTCCACCTTCAGGTTGCCAAAGGACTGCAAAATGGTCTGACGTTTGGCAGTTTT
GATTCCAATTTTGTGAAAGAGGTATCTTCTAGCAATGGTGCTAGTGGGGGATATGACTCA
AATTTTGAGTCTTCTCACGGGACAGGGGATGATGAGAGGGAATCTTCTCCCACTACCAAT
GGTATTACTGGGGTTGCTTCGGCTAGAGAAGAAACATCAACAGTTTCTGAAGATAAGGAT
TATGGGATATCAAATTCTGCAACTGGAGCTGAGCCTGTGGTGCACTCGGATCACATTGTC
CCACCTGTAGAAGAAGTACCGAAGGAGGAAGCTTTATCAAACACAGAAACTCATCAAATT
GCTTATGGTCAAGAAGCTCCACTCAGTGTGTTTGGTCTTGTCCCCTCGTTGTCAGCAATA
GGCCAACCCGTTAACACAGAAGCAGCGGAGACTCAGCCCGGAAATTCCAACTCTCCACCT
ATTTCATTAGTATCATATCCTCCAGATCAGAGCTCCATAGCAGCAGCCACTCAACAGACA
AATTTTCTTAGGCAGCAATACCCTCCCAATTTCTTCCCTTACGGCTATTACTCACCGTAT
TATATGCCACCGCCGTACATTCACCAGTTCTTGAGCCCAAACGGGATCCCTCAGCAGTCT
TATTTTCCACAAGGAGCTGCTCTAACAGCACCTTCTCATGCAAAACCAGTTGACAACACT
GAAAACCCTCCCACCACAAACCCTTACCTACACACTTCTCCCATGGTTGCTAGCAGCATC
CCATCTACAACCACCTTAAATTCTATCCATAGTGAAGAAAAGGCATCTCACCTGACTGAA
AGTGCAGCTGCATGGATTGGGCAGGGATTTGGCAACCTGCAGGTGAATCCAATGTATAAC
CTAGCATACCAAGGTCAGCCACTTGGTTTTCCAGTCGTGCAGGCTGGTCATGGTGGCCTC
ATGGGAATGCACCAACCAACACAGCCCATGGCAGCTGCTTCAACTACATATCAGACCTTA
CCACCACCGCCACACACAACAACGGCTATGGGTGAACCCATAGGACACCCGCACATTGCT
TATCAGCAACCTCAAGCTGCTCTAACGAATTGGGTTAACAACTATTAG

Peptide Sequence

PEP ID

AT1G55820.1
PEP Infomation

| lysine-specific demethylase%2C putative (DUF1296) | Chr1:20864397-20867418 FORWARD LENGTH=575 | 201606
Sequence

MSSSDGGSSRVSIPYHLRKTLQKIREYTGKQHSDEDIFAVYKDSFNDPHETAQKLLFLDT
FHEVRSKREKKKEPIVPVTQPSGRGGRRNFASSNSYQGSGRNASFKRENGANHVTRGSRT
AQPATNKASNITVPNETKVSGPASIPSEVSNHKAQDDPSLISASRCSSKSDQAIEIETAS
KQGKNQSLPKPDVSEQSHVTFPFHLQVAKGLQNGLTFGSFDSNFVKEVSSSNGASGGYDS
NFESSHGTGDDERESSPTTNGITGVASAREETSTVSEDKDYGISNSATGAEPVVHSDHIV
PPVEEVPKEEALSNTETHQIAYGQEAPLSVFGLVPSLSAIGQPVNTEAAETQPGNSNSPP
ISLVSYPPDQSSIAAATQQTNFLRQQYPPNFFPYGYYSPYYMPPPYIHQFLSPNGIPQQS
YFPQGAALTAPSHAKPVDNTENPPTTNPYLHTSPMVASSIPSTTTLNSIHSEEKASHLTE
SAAAWIGQGFGNLQVNPMYNLAYQGQPLGFPVVQAGHGGLMGMHQPTQPMAAASTTYQTL
PPPPHTTTAMGEPIGHPHIAYQQPQAALTNWVNNY

Transcript Sequence

Transcript ID

AT1G55820.1
Transcript Infomation

| lysine-specific demethylase%2C putative (DUF1296) | Chr1:20864339-20867761 FORWARD LENGTH=2129 | 201606
Sequence

AATTGCTCTCTCAATTTCTCTCTCCTCCCGCTTCTGCTTCTCTCCCTTAACAAGAACCAT
GAGCTCCTCCGATGGCGGCTCCTCTAGGGTTTCGATTCCTTACCATCTCCGCAAAACCCT
TCAGAAAATCAGAGAGTATACCGGAAAGCAGCACTCGGATGAGGATATCTTTGCCGTCTA
TAAGGATTCCTTCAATGATCCTCATGAGACCGCTCAGAAGCTCCTCTTCTTAGATACATT
TCATGAGGTGAGAAGTAAAAGGGAGAAAAAGAAGGAGCCTATAGTGCCAGTTACACAACC
AAGTGGCAGAGGTGGTCGGAGGAACTTTGCTTCAAGTAACTCTTATCAAGGTAGTGGAAG
AAATGCTTCTTTTAAAAGGGAAAATGGAGCTAATCATGTAACAAGAGGTTCTAGAACTGC
TCAGCCTGCCACTAACAAAGCAAGCAACATCACAGTACCTAATGAAACAAAGGTTTCTGG
TCCTGCTAGTATTCCGAGTGAGGTCAGCAATCATAAAGCTCAAGATGATCCTTCTTTGAT
TTCTGCTTCACGTTGCAGTAGCAAGTCAGATCAAGCCATTGAAATTGAGACTGCGTCCAA
ACAAGGCAAAAATCAATCGCTTCCTAAGCCAGATGTTAGCGAACAGTCACACGTAACATT
CCCTTTCCACCTTCAGGTTGCCAAAGGACTGCAAAATGGTCTGACGTTTGGCAGTTTTGA
TTCCAATTTTGTGAAAGAGGTATCTTCTAGCAATGGTGCTAGTGGGGGATATGACTCAAA
TTTTGAGTCTTCTCACGGGACAGGGGATGATGAGAGGGAATCTTCTCCCACTACCAATGG
TATTACTGGGGTTGCTTCGGCTAGAGAAGAAACATCAACAGTTTCTGAAGATAAGGATTA
TGGGATATCAAATTCTGCAACTGGAGCTGAGCCTGTGGTGCACTCGGATCACATTGTCCC
ACCTGTAGAAGAAGTACCGAAGGAGGAAGCTTTATCAAACACAGAAACTCATCAAATTGC
TTATGGTCAAGAAGCTCCACTCAGTGTGTTTGGTCTTGTCCCCTCGTTGTCAGCAATAGG
CCAACCCGTTAACACAGAAGCAGCGGAGACTCAGCCCGGAAATTCCAACTCTCCACCTAT
TTCATTAGTATCATATCCTCCAGATCAGAGCTCCATAGCAGCAGCCACTCAACAGACAAA
TTTTCTTAGGCAGCAATACCCTCCCAATTTCTTCCCTTACGGCTATTACTCACCGTATTA
TATGCCACCGCCGTACATTCACCAGTTCTTGAGCCCAAACGGGATCCCTCAGCAGTCTTA
TTTTCCACAAGGAGCTGCTCTAACAGCACCTTCTCATGCAAAACCAGTTGACAACACTGA
AAACCCTCCCACCACAAACCCTTACCTACACACTTCTCCCATGGTTGCTAGCAGCATCCC
ATCTACAACCACCTTAAATTCTATCCATAGTGAAGAAAAGGCATCTCACCTGACTGAAAG
TGCAGCTGCATGGATTGGGCAGGGATTTGGCAACCTGCAGGTGAATCCAATGTATAACCT
AGCATACCAAGGTCAGCCACTTGGTTTTCCAGTCGTGCAGGCTGGTCATGGTGGCCTCAT
GGGAATGCACCAACCAACACAGCCCATGGCAGCTGCTTCAACTACATATCAGACCTTACC
ACCACCGCCACACACAACAACGGCTATGGGTGAACCCATAGGACACCCGCACATTGCTTA
TCAGCAACCTCAAGCTGCTCTAACGAATTGGGTTAACAACTATTAGGTCAAGGGGAAGCA
GCTATAAAGATACACATCAAATGCGTAAAAGAGATGTAGAAGTCTGGATTTTTGGGTGTA
AATACTTAGGAACCATCATCCCCAGAGAAATTTAGGTTGACAATTACAAGAGGGAAGAAA
GATGTGCATCAATGTAGCAAACCTTTTACCTTATTTTTTGTTGTGAGACTATACAGAAAA
TACATAAAGAATGTTTGGGAAGATCCTTTTGGAAACGTTTTTTGAAGCTGTGACTGCTCT
CTATATGCCTGCCTAGTTTGTCTCTCTATTCCTAGCTTTTTACAAACTATTTGCTGTGAC
TTAGCTGAATCAGCTTTAGGCTCTCTTTA