Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G55630.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:20791817-20793250 REVERSE LENGTH=1434 \| 201606
Sequence	ATGAACTCTGTAATTCATTATAGCACTAGTGTTGCGGTTCGTAAAGCTTCTCGCTTTCTC TTCACATCGAGGAAATTTTGCAATGGTAGCATCGGTGGTGATGTAACCGATAACGGGACC GAAGAGCCCTTGAAGATAACTTGGGAATCTTCGGAGATGGATTGTGAGTTTGACCAGGAG GAAAATGGTGAGAAAATCTCTGTTAGAAAAAGGTTTATGGAGAGTACTAAACTCAGTGCG TCTCGGGTTCTCGATACGTTACAGCAAGATTGTCCCGGTTTCAATACGAAATCAGCTTTA GATGAATTGAATGTTTCAATCTCAGGGCTATTAGTGAGAGAGGTTCTTGTTGGGATCTTA AGAACTCTGAGCTTTGATAATAAAACAAGGTGTGCTAAGCTCGCTTACAAGTTCTTTGTG TGGTGTGGTGGACAAGAGAATTTCAGGCACACTGCGAATTGTTATCATTTACTTATGAAG ATATTTGCTGAATGTGGTGAGTATAAAGCCATGTGCAGGCTAATTGATGAGATGATCAAA GACGGTTATCCAACAACAGCATGCACGTTTAATCTATTGATATGTACTTGCGGGGAAGCA GGCCTTGCTAGAGATGTTGTTGAGCAGTTCATCAAGTCGAAAACTTTCAATTACCGACCT TATAAACACTCTTACAATGCCATTTTGCATTCTTTGCTAGGGGTGAAACAGTACAAGCTG ATTGATTGGGTTTACGAGCAGATGTTAGAAGACGGGTTTACGCCAGATGTTCTGACTTAC AACATTGTAATGTTTGCAAACTTTAGGTTAGGGAAAACAGATCGGCTTTATAGATTGCTA GATGAAATGGTTAAAGACGGGTTTTCTCCTGATTTGTATACATACAACATCCTCCTCCAT CATCTAGCAACAGGAAACAAGCCTCTCGCTGCTCTTAACCTTCTGAATCATATGAGGGAA GTAGGAGTTGAGCCCGGTGTCATCCATTTCACTACTCTGATAGACGGGCTGAGCCGAGCT GGGAAGTTAGAAGCTTGCAAATACTTTATGGACGAAACGGTGAAAGTTGGATGCACGCCA GATGTTGTTTGCTACACTGTTATGATCACAGGATATATATCAGGTGGGGAGCTCGAGAAA GCCGAAGAAATGTTCAAAGAAATGACAGAAAAGGGGCAACTCCCGAATGTTTTCACATAC AATTCGATGATCCGCGGGTTTTGTATGGCGGGGAAATTCAAAGAGGCGTGCGCGTTGCTC AAGGAAATGGAGTCAAGAGGGTGTAACCCTAATTTTGTAGTGTATAGTACACTGGTGAAC AATCTAAAAAACGCGGGGAAGGTTTTAGAGGCTCATGAAGTAGTGAAGGACATGGTAGAG AAAGGGCATTATGTTCATCTTATTTCAAAGTTGAAAAAATATAGAAGATCTTAG

Peptide Sequence

PEP ID	AT1G55630.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:20791817-20793250 REVERSE LENGTH=477 \| 201606
Sequence	MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTEEPLKITWESSEMDCEFDQE ENGEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREVLVGIL RTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK DGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKL IDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTP DVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALL KEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRRS

Transcript Sequence

Transcript ID	AT1G55630.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:20791635-20793581 REVERSE LENGTH=1947 \| 201606
Sequence	TCAGCGATTCTCTTCTCGGTAGTTCTCAAAAGCAGAGAGCAGCGGCAGAGACGTCTGAGT AGAACCTGGGATCCAGGTTCAGTTATTTTACCATTATACCCCTTGAACTCGTCTTCTTCG TCAAGGTAATCTTCGATTTCAGATGGAATCTGTAGAAATCTAGATTCCAATTTGCTTAAT TGCCAATAGTTTGATGGGTTTTTGCGGTTTTGCGAATCCGAGGCTCTCGGAGGTGAGATT TTCGTCTTTGAATTTAGAGTTCTCGGGTCTGCTTAGTTCCTTTAAGTTCCAGAGATGATG AAGAAAAATCTATTTTGGATTAAGCTCAAATATGAACTCTGTAATTCATTATAGCACTAG TGTTGCGGTTCGTAAAGCTTCTCGCTTTCTCTTCACATCGAGGAAATTTTGCAATGGTAG CATCGGTGGTGATGTAACCGATAACGGGACCGAAGAGCCCTTGAAGATAACTTGGGAATC TTCGGAGATGGATTGTGAGTTTGACCAGGAGGAAAATGGTGAGAAAATCTCTGTTAGAAA AAGGTTTATGGAGAGTACTAAACTCAGTGCGTCTCGGGTTCTCGATACGTTACAGCAAGA TTGTCCCGGTTTCAATACGAAATCAGCTTTAGATGAATTGAATGTTTCAATCTCAGGGCT ATTAGTGAGAGAGGTTCTTGTTGGGATCTTAAGAACTCTGAGCTTTGATAATAAAACAAG GTGTGCTAAGCTCGCTTACAAGTTCTTTGTGTGGTGTGGTGGACAAGAGAATTTCAGGCA CACTGCGAATTGTTATCATTTACTTATGAAGATATTTGCTGAATGTGGTGAGTATAAAGC CATGTGCAGGCTAATTGATGAGATGATCAAAGACGGTTATCCAACAACAGCATGCACGTT TAATCTATTGATATGTACTTGCGGGGAAGCAGGCCTTGCTAGAGATGTTGTTGAGCAGTT CATCAAGTCGAAAACTTTCAATTACCGACCTTATAAACACTCTTACAATGCCATTTTGCA TTCTTTGCTAGGGGTGAAACAGTACAAGCTGATTGATTGGGTTTACGAGCAGATGTTAGA AGACGGGTTTACGCCAGATGTTCTGACTTACAACATTGTAATGTTTGCAAACTTTAGGTT AGGGAAAACAGATCGGCTTTATAGATTGCTAGATGAAATGGTTAAAGACGGGTTTTCTCC TGATTTGTATACATACAACATCCTCCTCCATCATCTAGCAACAGGAAACAAGCCTCTCGC TGCTCTTAACCTTCTGAATCATATGAGGGAAGTAGGAGTTGAGCCCGGTGTCATCCATTT CACTACTCTGATAGACGGGCTGAGCCGAGCTGGGAAGTTAGAAGCTTGCAAATACTTTAT GGACGAAACGGTGAAAGTTGGATGCACGCCAGATGTTGTTTGCTACACTGTTATGATCAC AGGATATATATCAGGTGGGGAGCTCGAGAAAGCCGAAGAAATGTTCAAAGAAATGACAGA AAAGGGGCAACTCCCGAATGTTTTCACATACAATTCGATGATCCGCGGGTTTTGTATGGC GGGGAAATTCAAAGAGGCGTGCGCGTTGCTCAAGGAAATGGAGTCAAGAGGGTGTAACCC TAATTTTGTAGTGTATAGTACACTGGTGAACAATCTAAAAAACGCGGGGAAGGTTTTAGA GGCTCATGAAGTAGTGAAGGACATGGTAGAGAAAGGGCATTATGTTCATCTTATTTCAAA GTTGAAAAAATATAGAAGATCTTAGTTTTTTTTAGTTTGTTTCATAAGGCTTTTTTGTGA TATCGATTAAACGGATTTTTTTTTTTGCCTACCTCATGTTCCTTAACATGTTTTAGTAGG CTGTTGTGTATTAGCCATTTTAACCGAACCAAATGTATTGAACCGAAGTGAAAAGAACCA ATCAGAACCAAACGAATGGATACTAAA