Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G54940.1
CDS Infomation	\| plant glycogenin-like starch initiation protein 4 \| Chr1:20481690-20484541 FORWARD LENGTH=1674 \| 201606
Sequence	ATGGGGACAAAAACCCATAATTCTAGAGGGAAAATCTTCATGATCTATCTAATCCTAGTC TCATTGTCACTTCTAGGTTTGATCTTACCTTTTAAACCTCTTTTCCGGATTACTTCTCCA TCTTCAACGTTACGGATTGATCTTCCATCGCCGCAAGTCAACAAAAACCCGAAATGGCTT CGACTCATCCGTAACTATCTACCAGAGAAAAGAATCCAAGTCGGCTTCCTTAACATAGAC GAGAAAGAGCGTGAGAGCTACGAGGCTCGTGGACCGTTGGTACTTAAGAACATCCACGTG CCGCTTGATCATATACCCAAGAATGTCACTTGGAAGAGTCTTTACCCGGAGTGGATCAAC GAGGAAGCTTCTACCTGTCCGGAGATCCCTCTCCCTCAGCCAGAAGGTTCTGATGCTAAC GTGGACGTTATTGTTGCTAGAGTTCCATGTGATGGTTGGTCGGCGAATAAAGGGCTTAGG GACGTTTTTAGGCTTCAGGTTAATTTGGCCGCAGCGAATCTAGCCGTCCAAAGTGGGTTG AGGACGGTTAATCAGGCGGTCTACGTTGTATTCATCGGCTCATGTGGGCCTATGCATGAG ATTTTCCCGTGCGATGAGCGCGTGATGCGCGTGGAGGATTATTGGGTGTATAAGCCTTAT CTCCCAAGGTTGAAGCAGAAGCTTCTCATGCCTGTTGGTTCATGTCAGATTGCTCCTTCA TTTGCTCAATTTGGTCAAGAAGCATGGAGACCAAAACATGAAGATAATCTTGCATCAAAG GCAGTCACAGCCTTACCCCGTCGCTTACGGGTTGCCTACGTGACAGTACTACACTCGTCA GAAGCCTATGTTTGTGGGGCAATAGCTTTAGCGCAAAGTATAAGACAATCAGGATCGCAT AAGGACATGATTCTCCTCCATGATCATACCATAACCAACAAGTCTCTTATTGGTCTCAGC GCTGCGGGATGGAATCTCCGGCTAATCGACAGGATCCGCAGTCCTTTTTCGCAAAAAGAC TCTTATAATGAGTGGAACTATAGCAAATTACGTGTGTGGCAAGTAACTGACTACGATAAA CTTGTGTTCATAGACGCAGATTTCATCATCCTCAAGAAACTTGATCATCTCTTCTACTAT CCACAACTCTCAGCTTCAGGCAACGACAAAGTGTTATTCAACTCCGGAATCATGGTTCTC GAGCCATCGGCATGTATGTTTAAAGATTTAATGGAGAAATCGTTCAAGATTGAGTCATAC AACGGAGGAGACCAAGGATTCCTTAATGAGATATTTGTATGGTGGCACAGGTTATCGAAA CGAGTGAACACAATGAAGTACTTCGACGAAAAAAATCATCGAAGACACGATCTTCCTGAG AATGTAGAAGGTCTGCACTACTTGGGGTTGAAACCATGGGTATGTTATAGAGACTATGAT TGCAATTGGGACATTAGCGAACGACGCGTGTTTGCAAGCGATTCTGTGCACGAAAAATGG TGGAAAGTGTATGACAAAATGTCAGAGCAGTTGAAAGGTTATTGTGGTTTGAATAAGAAT ATGGAGAAGAGGATTGAGAAGTGGAGAAGAATCGCTAAGAACAATAGTTTGCCTGATAGG CATTGGGAGATTGAAGTGAGAGATCCTAGGAAGACGAATCTTCTTGTTCAGTGA

Peptide Sequence

PEP ID	AT1G54940.1
PEP Infomation	\| plant glycogenin-like starch initiation protein 4 \| Chr1:20481690-20484541 FORWARD LENGTH=557 \| 201606
Sequence	MGTKTHNSRGKIFMIYLILVSLSLLGLILPFKPLFRITSPSSTLRIDLPSPQVNKNPKWL RLIRNYLPEKRIQVGFLNIDEKERESYEARGPLVLKNIHVPLDHIPKNVTWKSLYPEWIN EEASTCPEIPLPQPEGSDANVDVIVARVPCDGWSANKGLRDVFRLQVNLAAANLAVQSGL RTVNQAVYVVFIGSCGPMHEIFPCDERVMRVEDYWVYKPYLPRLKQKLLMPVGSCQIAPS FAQFGQEAWRPKHEDNLASKAVTALPRRLRVAYVTVLHSSEAYVCGAIALAQSIRQSGSH KDMILLHDHTITNKSLIGLSAAGWNLRLIDRIRSPFSQKDSYNEWNYSKLRVWQVTDYDK LVFIDADFIILKKLDHLFYYPQLSASGNDKVLFNSGIMVLEPSACMFKDLMEKSFKIESY NGGDQGFLNEIFVWWHRLSKRVNTMKYFDEKNHRRHDLPENVEGLHYLGLKPWVCYRDYD CNWDISERRVFASDSVHEKWWKVYDKMSEQLKGYCGLNKNMEKRIEKWRRIAKNNSLPDR HWEIEVRDPRKTNLLVQ

Transcript Sequence

Transcript ID	AT1G54940.1
Transcript Infomation	\| plant glycogenin-like starch initiation protein 4 \| Chr1:20481648-20484799 FORWARD LENGTH=1974 \| 201606
Sequence	TATAGGTATAGGAGCGAGACACAAGAGAAATATTACCAAAAAATGGGGACAAAAACCCAT AATTCTAGAGGGAAAATCTTCATGATCTATCTAATCCTAGTCTCATTGTCACTTCTAGGT TTGATCTTACCTTTTAAACCTCTTTTCCGGATTACTTCTCCATCTTCAACGTTACGGATT GATCTTCCATCGCCGCAAGTCAACAAAAACCCGAAATGGCTTCGACTCATCCGTAACTAT CTACCAGAGAAAAGAATCCAAGTCGGCTTCCTTAACATAGACGAGAAAGAGCGTGAGAGC TACGAGGCTCGTGGACCGTTGGTACTTAAGAACATCCACGTGCCGCTTGATCATATACCC AAGAATGTCACTTGGAAGAGTCTTTACCCGGAGTGGATCAACGAGGAAGCTTCTACCTGT CCGGAGATCCCTCTCCCTCAGCCAGAAGGTTCTGATGCTAACGTGGACGTTATTGTTGCT AGAGTTCCATGTGATGGTTGGTCGGCGAATAAAGGGCTTAGGGACGTTTTTAGGCTTCAG GTTAATTTGGCCGCAGCGAATCTAGCCGTCCAAAGTGGGTTGAGGACGGTTAATCAGGCG GTCTACGTTGTATTCATCGGCTCATGTGGGCCTATGCATGAGATTTTCCCGTGCGATGAG CGCGTGATGCGCGTGGAGGATTATTGGGTGTATAAGCCTTATCTCCCAAGGTTGAAGCAG AAGCTTCTCATGCCTGTTGGTTCATGTCAGATTGCTCCTTCATTTGCTCAATTTGGTCAA GAAGCATGGAGACCAAAACATGAAGATAATCTTGCATCAAAGGCAGTCACAGCCTTACCC CGTCGCTTACGGGTTGCCTACGTGACAGTACTACACTCGTCAGAAGCCTATGTTTGTGGG GCAATAGCTTTAGCGCAAAGTATAAGACAATCAGGATCGCATAAGGACATGATTCTCCTC CATGATCATACCATAACCAACAAGTCTCTTATTGGTCTCAGCGCTGCGGGATGGAATCTC CGGCTAATCGACAGGATCCGCAGTCCTTTTTCGCAAAAAGACTCTTATAATGAGTGGAAC TATAGCAAATTACGTGTGTGGCAAGTAACTGACTACGATAAACTTGTGTTCATAGACGCA GATTTCATCATCCTCAAGAAACTTGATCATCTCTTCTACTATCCACAACTCTCAGCTTCA GGCAACGACAAAGTGTTATTCAACTCCGGAATCATGGTTCTCGAGCCATCGGCATGTATG TTTAAAGATTTAATGGAGAAATCGTTCAAGATTGAGTCATACAACGGAGGAGACCAAGGA TTCCTTAATGAGATATTTGTATGGTGGCACAGGTTATCGAAACGAGTGAACACAATGAAG TACTTCGACGAAAAAAATCATCGAAGACACGATCTTCCTGAGAATGTAGAAGGTCTGCAC TACTTGGGGTTGAAACCATGGGTATGTTATAGAGACTATGATTGCAATTGGGACATTAGC GAACGACGCGTGTTTGCAAGCGATTCTGTGCACGAAAAATGGTGGAAAGTGTATGACAAA ATGTCAGAGCAGTTGAAAGGTTATTGTGGTTTGAATAAGAATATGGAGAAGAGGATTGAG AAGTGGAGAAGAATCGCTAAGAACAATAGTTTGCCTGATAGGCATTGGGAGATTGAAGTG AGAGATCCTAGGAAGACGAATCTTCTTGTTCAGTGAGAGGGTAATAGCTTTTTGATTTTT ATTGGAGTCTTAAAGGACATTTGGGAACTGGGAATTGAAGAACCTTCTAATTCAAGAAAG GGTTTCGCTTTAGTATTTATAGTATGAAAATGTACAATGTAGAATCTTACTTTGACGGAT GAGAGTGGGATGTGGTAGACACCAAATGATCCTTTGAATTTTTCACATTGTTTTTCCTAT ATATTCATTTATTGATGTTTAAATCAATGAGAATTCTAAAATTATACTTATAAA