Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G54710.1
CDS Infomation	\| autophagy 18h-like protein \| Chr1:20417019-20420733 REVERSE LENGTH=2784 \| 201606
Sequence	ATGAAGAGTAACTCCAAGGTCAACATCAACAACAACGGAGATAATCATAATCAAACGAAG AATAATGGTACTAATGGCTTTTTGCCCAATTCGTTAAAATTCATCTCTACTTGCATCAGA ACTGCTTCCTCCGGTGTTCGCTCAGCTAGCGCCTCCGTCGCTGCTTCCCTCTCTTCTGAT TCTCACGAGCTTAAAGATCAGGTGTTGTGGTCTTCATTTGATAGATTGCACACAAGTGAA TCATCTTTCAAGAACGTTCTATTACTAGGTTATACAAACGGGTTTCAAGTTCTTGATATC GATGATTCAAATGATGTTACCGAATTCGTGTCGAGGCGGGATGATCCGGTTACATTTTTA CAGATGCAGCCATTACCTGCTAAATGTGATGGAGTTGAAGGGTTTAGATCATCACATCCT ATACTTTTAGCTGTTGCTGATGAAGCTAAAGGTTCAGGTCCTATTGTTACTAGTAGAGAT GGATCTGTTAGAAATGGTTATGAGGATCCTCTTGCACTCTCTCCCACGGTTGTGCGATTT TATTCGCTTAGATCGCATAACTATGTTCATGTTTTGAGGTTTAGATCTACTGTTTATATG GTTAGATGCAGTCCTCGGATTGTCGCTGTTGGCCTCGGTTCGCAGATATATTGTTTTGAT GCGCTAACTCTTGAAAACAAATTCAGTGTCCTCTCGTATCCTGTACCTCAGCTTGGAAAC CAAGGGATATCTGGGGTTAATGTTGGATATGGTCCAATGGCTGTCGGGGCTAGATGGTTA GCGTATGCTTCCAATAGTCCCTTGTCTTCTAGTATAGGTCGTCTGAGCCCTCAGAATGTT ACTCCTCCTGGTGTCAGTCCATCTACCTCGCCAAATAATGGTAATCTGGTGGCAAGATAC GCTATGGAATCTAGTAAGCATTTGGCAGCTGGGTTACTCAATTTGGGTGACAAGGGTTAC AAAACTATATCTAAATACTGTCAAGATCTCAAGCATGACGGTCCTGGTCCTTCTCTTTCG TCCAGCCCTGGCCGGAAAGTTGGTCGGGTCGGTTCTCATTCAGCTGAGTCAGATGTTGTT GGAACGGTAATTGTCAAAGATTTTGAGTCCCGAGCTATTATAGCACAATTCAGGGCTCAC ACTAGTCCAATCTCTGCTCTCTGTTTCGACCCTAGTGGCACTTTACTAGTAACAGCCTCA ATCCACGGTAACAATATTAACGTTTTCCGGATTATGCCGACACCTACAAAGAATGGACCG GGTGCTCAAAGCTATGATTGGAGCTCTTCCCATGTGCCTCTTTACAAACTACATCGTGGC ATGACATCAGCTGTGATACAAGATATTTGCTTTAGTAGCTACAGTCAGTGGATTGCAATT GTTTCATCTAAGAGCACCTGCCATATTTATGTTTTATCCCCGTTCGGGGGAGAAAATGTT CTTGAAATACGAAACTCTCAATTCGATGGACCGACGCTTGCTCCAACATTATCCCTGCCA TGGTGGTCAAGTCCGTCGTTTATGACCACCCATTTTTCATATCCACCACCAGCGTCAGTT ACTCTTTCTGTGGTTAGCCGAATCAAATGCAACAATTTCTTCCATGCTGCAAGTTCCGTT GTAGGAAAACCCACCTTCCCCTCTGGCTGTCTTGCTGCTGTTTTCCATCAATCTGTGCCA CAAGAATCGCAGTCGTCATCTCCTGCCTTGGACTACTTACTGGTTTACACTCCATCAGGT CATGTAGTTCAATACAAACTCATTCCATCTCTTGGAGGAGACCAGGCTGAGAGCAATACG CGAAATGGAGCAACTTCTGGGCTGACCTCTGAAGAGGAACTGAGAGTGAAAGTTGAACCA GTTCAGTGTTGGGATGTCTGTCGAAGAGCGGATTGGCCAGAGAGGGAGGAGAACATATGC GGGCTTACTTATGGTGGACGAAAAAATGCTGAGTTAACTGTTGATACTTCTGATAGTGAA GATCAAACAAAGCCTCTGGAGAAACACCATGTTTATCTTGCCAATGCAGAGGTGCTGATA AACTCCGGAAGAAAACCAATCTGGCAAAATTCAGAGATATCTTTCTATCCGATGTATCCA CCAGACTCTGATGGCAAGAACCTGAATTCGCATCAAGGTGGTGGGGAGACAGAAATCGGG AAAGTATCTGCGAACGAGGTTGACATTAGGCGAAAGGATCTTCTGCCGGTATATGATAAT TTTCACAGTGTGTATACCAGTATGCGCAACAGAGGATTTTCTGGGGAAAGAGATTCAGAT TCTTCTTCTTCTTCTGACCCTGGACAAGTTAAAGAAATGCATCCATTCAATGGTATGGTT TACCCCGAAGATGAGGAAAGAAGAGGGAGTGCCCATTTTGCACTAACTCCAAACCAAAAT CCTCATACCGGAATTGTAACATTTAAACAGCCTGTAGTTTCCATTTCTTCTGCTGTGAAA GACACTGATTATATAGACGACGACGCTCATGTCTTGCCAAAGAACGCCTCCCTGCCCGCT GAAACAAAAATTGAAAACAGCAGTGGGATAAGTGGAGATTCAAATGTAAGTTCTAACCGT TCTGATATGAGCATGAATGCAGCAGACGAGGGTGAAGGACCCATTGACGGCTCCCCAAAC TTCGAGCAGTTTTTCGAGGAGGTGGTCTCCAATGAAACTGTTACAGAAACTGAGCATAAG GATGCTCCATCTGATGGAAAACTCGATGATGATGAGGACGATGACATGCTTGGTGGTGTT TTCGCTTTCTCCGAAGAAGGTTGA

Peptide Sequence

PEP ID	AT1G54710.1
PEP Infomation	\| autophagy 18h-like protein \| Chr1:20417019-20420733 REVERSE LENGTH=927 \| 201606
Sequence	MKSNSKVNINNNGDNHNQTKNNGTNGFLPNSLKFISTCIRTASSGVRSASASVAASLSSD SHELKDQVLWSSFDRLHTSESSFKNVLLLGYTNGFQVLDIDDSNDVTEFVSRRDDPVTFL QMQPLPAKCDGVEGFRSSHPILLAVADEAKGSGPIVTSRDGSVRNGYEDPLALSPTVVRF YSLRSHNYVHVLRFRSTVYMVRCSPRIVAVGLGSQIYCFDALTLENKFSVLSYPVPQLGN QGISGVNVGYGPMAVGARWLAYASNSPLSSSIGRLSPQNVTPPGVSPSTSPNNGNLVARY AMESSKHLAAGLLNLGDKGYKTISKYCQDLKHDGPGPSLSSSPGRKVGRVGSHSAESDVV GTVIVKDFESRAIIAQFRAHTSPISALCFDPSGTLLVTASIHGNNINVFRIMPTPTKNGP GAQSYDWSSSHVPLYKLHRGMTSAVIQDICFSSYSQWIAIVSSKSTCHIYVLSPFGGENV LEIRNSQFDGPTLAPTLSLPWWSSPSFMTTHFSYPPPASVTLSVVSRIKCNNFFHAASSV VGKPTFPSGCLAAVFHQSVPQESQSSSPALDYLLVYTPSGHVVQYKLIPSLGGDQAESNT RNGATSGLTSEEELRVKVEPVQCWDVCRRADWPEREENICGLTYGGRKNAELTVDTSDSE DQTKPLEKHHVYLANAEVLINSGRKPIWQNSEISFYPMYPPDSDGKNLNSHQGGGETEIG KVSANEVDIRRKDLLPVYDNFHSVYTSMRNRGFSGERDSDSSSSSDPGQVKEMHPFNGMV YPEDEERRGSAHFALTPNQNPHTGIVTFKQPVVSISSAVKDTDYIDDDAHVLPKNASLPA ETKIENSSGISGDSNVSSNRSDMSMNAADEGEGPIDGSPNFEQFFEEVVSNETVTETEHK DAPSDGKLDDDEDDDMLGGVFAFSEEG

Transcript Sequence

Transcript ID	AT1G54710.1
Transcript Infomation	\| autophagy 18h-like protein \| Chr1:20416770-20421156 REVERSE LENGTH=3456 \| 201606
Sequence	CGCCAAAGCACTACAGTAACTCTTTCTTTTAGGACAGTGACTTTTAAGTTTTACTCAAAA ACCAAATAGACAAAACAAAACTAACTAAAACTTAAAGCCACAAAGGCCCAAAGAACAAAA CAAAAAGCAAACCCAAAAAAAAAAAAAAAACAGAAACCAAAAAAAAGCAAAGAACCGTTT CTTCTCCATCATCATCATCATCTTCTTCGCTTCTTCTTCTTCTTCCGTGAAGAAGGTCAA AAAACACACCACCGCTTAACCCCAATTACCAAAAAATGGCAAAGCTTCAAAATTTCTCAA ATTAAACAATCTCTTTACTTATTCTTCTTCTTCGAAATCGCCGCCGGCTTATGCTGTTTC CGATCGTTGTCTCTTCTCCGGTGTATCTCCGGTGGTATCTTCCACGAAGAATTCATAATT ACTATGAAGAGTAACTCCAAGGTCAACATCAACAACAACGGAGATAATCATAATCAAACG AAGAATAATGGTACTAATGGCTTTTTGCCCAATTCGTTAAAATTCATCTCTACTTGCATC AGAACTGCTTCCTCCGGTGTTCGCTCAGCTAGCGCCTCCGTCGCTGCTTCCCTCTCTTCT GATTCTCACGAGCTTAAAGATCAGGTGTTGTGGTCTTCATTTGATAGATTGCACACAAGT GAATCATCTTTCAAGAACGTTCTATTACTAGGTTATACAAACGGGTTTCAAGTTCTTGAT ATCGATGATTCAAATGATGTTACCGAATTCGTGTCGAGGCGGGATGATCCGGTTACATTT TTACAGATGCAGCCATTACCTGCTAAATGTGATGGAGTTGAAGGGTTTAGATCATCACAT CCTATACTTTTAGCTGTTGCTGATGAAGCTAAAGGTTCAGGTCCTATTGTTACTAGTAGA GATGGATCTGTTAGAAATGGTTATGAGGATCCTCTTGCACTCTCTCCCACGGTTGTGCGA TTTTATTCGCTTAGATCGCATAACTATGTTCATGTTTTGAGGTTTAGATCTACTGTTTAT ATGGTTAGATGCAGTCCTCGGATTGTCGCTGTTGGCCTCGGTTCGCAGATATATTGTTTT GATGCGCTAACTCTTGAAAACAAATTCAGTGTCCTCTCGTATCCTGTACCTCAGCTTGGA AACCAAGGGATATCTGGGGTTAATGTTGGATATGGTCCAATGGCTGTCGGGGCTAGATGG TTAGCGTATGCTTCCAATAGTCCCTTGTCTTCTAGTATAGGTCGTCTGAGCCCTCAGAAT GTTACTCCTCCTGGTGTCAGTCCATCTACCTCGCCAAATAATGGTAATCTGGTGGCAAGA TACGCTATGGAATCTAGTAAGCATTTGGCAGCTGGGTTACTCAATTTGGGTGACAAGGGT TACAAAACTATATCTAAATACTGTCAAGATCTCAAGCATGACGGTCCTGGTCCTTCTCTT TCGTCCAGCCCTGGCCGGAAAGTTGGTCGGGTCGGTTCTCATTCAGCTGAGTCAGATGTT GTTGGAACGGTAATTGTCAAAGATTTTGAGTCCCGAGCTATTATAGCACAATTCAGGGCT CACACTAGTCCAATCTCTGCTCTCTGTTTCGACCCTAGTGGCACTTTACTAGTAACAGCC TCAATCCACGGTAACAATATTAACGTTTTCCGGATTATGCCGACACCTACAAAGAATGGA CCGGGTGCTCAAAGCTATGATTGGAGCTCTTCCCATGTGCCTCTTTACAAACTACATCGT GGCATGACATCAGCTGTGATACAAGATATTTGCTTTAGTAGCTACAGTCAGTGGATTGCA ATTGTTTCATCTAAGAGCACCTGCCATATTTATGTTTTATCCCCGTTCGGGGGAGAAAAT GTTCTTGAAATACGAAACTCTCAATTCGATGGACCGACGCTTGCTCCAACATTATCCCTG CCATGGTGGTCAAGTCCGTCGTTTATGACCACCCATTTTTCATATCCACCACCAGCGTCA GTTACTCTTTCTGTGGTTAGCCGAATCAAATGCAACAATTTCTTCCATGCTGCAAGTTCC GTTGTAGGAAAACCCACCTTCCCCTCTGGCTGTCTTGCTGCTGTTTTCCATCAATCTGTG CCACAAGAATCGCAGTCGTCATCTCCTGCCTTGGACTACTTACTGGTTTACACTCCATCA GGTCATGTAGTTCAATACAAACTCATTCCATCTCTTGGAGGAGACCAGGCTGAGAGCAAT ACGCGAAATGGAGCAACTTCTGGGCTGACCTCTGAAGAGGAACTGAGAGTGAAAGTTGAA CCAGTTCAGTGTTGGGATGTCTGTCGAAGAGCGGATTGGCCAGAGAGGGAGGAGAACATA TGCGGGCTTACTTATGGTGGACGAAAAAATGCTGAGTTAACTGTTGATACTTCTGATAGT GAAGATCAAACAAAGCCTCTGGAGAAACACCATGTTTATCTTGCCAATGCAGAGGTGCTG ATAAACTCCGGAAGAAAACCAATCTGGCAAAATTCAGAGATATCTTTCTATCCGATGTAT CCACCAGACTCTGATGGCAAGAACCTGAATTCGCATCAAGGTGGTGGGGAGACAGAAATC GGGAAAGTATCTGCGAACGAGGTTGACATTAGGCGAAAGGATCTTCTGCCGGTATATGAT AATTTTCACAGTGTGTATACCAGTATGCGCAACAGAGGATTTTCTGGGGAAAGAGATTCA GATTCTTCTTCTTCTTCTGACCCTGGACAAGTTAAAGAAATGCATCCATTCAATGGTATG GTTTACCCCGAAGATGAGGAAAGAAGAGGGAGTGCCCATTTTGCACTAACTCCAAACCAA AATCCTCATACCGGAATTGTAACATTTAAACAGCCTGTAGTTTCCATTTCTTCTGCTGTG AAAGACACTGATTATATAGACGACGACGCTCATGTCTTGCCAAAGAACGCCTCCCTGCCC GCTGAAACAAAAATTGAAAACAGCAGTGGGATAAGTGGAGATTCAAATGTAAGTTCTAAC CGTTCTGATATGAGCATGAATGCAGCAGACGAGGGTGAAGGACCCATTGACGGCTCCCCA AACTTCGAGCAGTTTTTCGAGGAGGTGGTCTCCAATGAAACTGTTACAGAAACTGAGCAT AAGGATGCTCCATCTGATGGAAAACTCGATGATGATGAGGACGATGACATGCTTGGTGGT GTTTTCGCTTTCTCCGAAGAAGGTTGAGTTTAGTTAAACTATGGCCAAAGAAAGCTCTAA TGGAGAAGGGGTCACATACTAATCCCGTTTGCTGCAACTTTTACTCACTGATGATCTTTA ATACCCTGAAAAAATAACATTTAAAATCAATTTCTTTTATCATCTGTTTCTGTAAATGCT TGTAAATGTAATGTTCATTATCAACAGTCTCTCGATTTCCATGGACTGTTTCTTTGTAAT CTTTTTTTTTCGTGTAACTCTCTCTATTCATTCATC