Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G53645.1
CDS Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr1:20026434-20028587 REVERSE LENGTH=1572 \| 201606
Sequence	ATGAGAAGTGCTATAGGAAGAAGATTCTCAAACCCTAATGGCTTCACCATTGCATCCTTA GTCAAACAAACTCCATTTCTCACCCAATCCACATCTCATTTCTCCTCTTCCTCCGACTCC TCCGGCCGTGGTCGTGGACGCGGTTCCGGTGAAGATGGAGGATTTCCCGCCGCTGGAAGA GGACAATTCGGTGTAAATCGTGAACCGGTGGTTCCTGGACGTGAACCGTCATCTGCCGGA GGTTATGGTCATGGTCGTGGTCGTCCGATCCAATCTGATTCGATTTCTCCTGCGTTTACG TCATTTGTCAAATCAGATTCTCCTAGTATTGGCCGTGGAAGAGGATCCGTTGGATCAGAC ACCGTTTCACCTTTCGCTGCTGAACCTCCTCGCCAATCGCCGCCTCCACCGCAGCAACAA CAGTCTCAATCGCAGCAACAGCGTTCACAACCACAACAGCAGCAGCCGCGTTCGCAACCA CAGCAGCAGCCTAATGATGAATCTCAGGGAAGTCCTGTATTTGTGAAGCTGCAGGAGATG CAGGACGCAACTTCGTCTCCACCACCACCAGAGTCTAAACCTGGTCAAGCTGATCCACCT GATAACATATTCAATGCATTAGGAAACGAATTTTCACATCCTAGTGGAGCAGGTCGAGGA AAGCCTCTTGTGGAATCTGCTCCAATCCGACAAGAAGATAACCGCCAAATTCGACGCCCT CCGCCTCCACCGCAGCAGCAGAGAGTACAACCTCAGCAGAAGCGGGCTCCAACGGTCAAA GATGGAACTCCTAAGCCGCAATTGAGTGCGGAAGAGGCTGGAAGAAGAGCAAGGAGTGAG CTTTCGCGTGGTGAAGCTGAAGGAAGCAGTGTGGGAGGAAGAGGAGGGAGAGGGAGAGGG AGAGGAAGAGGAGCAAGAGGGAGAGGCAGAGGAAGAGGTGGTGATGGATGGAGAGATGAT AAGAAAGAAGAAGAAGGTGAACAAGAGGCTATGCGTATATTTGCTGGAGATTCAGCTGAT GGAGAGAAGTTTGCTGAGAAAATGGGACCTGAATTGATGAAAACGCTTGCGGAAGGTTTT GAGGAAATTTGCGAAAAGGCGTTGCCTTCTACTACTCACGATGCCATTATAGATGCTTAT GATACCAATCTCATGATTGAGTGTGAGCCTGAATACATTATGCCAGACTTTGGATCAAAT CCTGACATTGATGAGAAACCACCAATGTCTCTGCGTGAGTGCCTTGAGAAGGTGAAGCCT TTCATAGTGGCTTACGAAGGAATCAAGGATCAAGAAGAATGGGAGGAAGCAATTAATGAA GCGATGACACAGGCTCCCCTTATGAAAGAGATTGTTGATCACTACAGTGGTCCTGATCGT GTAACTGCTAAGAAACAGAACGAGGAACTCGATAGAATTGCTACAACGCTTCCCGCAAGT GCACCTGATTCCGTGAAACGATTTGCAGATCGTGCAGCTCTTACTCTTAAGAGTAATCCA GGTTGGGGATTTGATAAGAAATACCAGTTCATGGACAAGCTCGTTTTAGAGGTGTCACAA AGCTACAAATAG

Peptide Sequence

PEP ID	AT1G53645.1
PEP Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr1:20026434-20028587 REVERSE LENGTH=523 \| 201606
Sequence	MRSAIGRRFSNPNGFTIASLVKQTPFLTQSTSHFSSSSDSSGRGRGRGSGEDGGFPAAGR GQFGVNREPVVPGREPSSAGGYGHGRGRPIQSDSISPAFTSFVKSDSPSIGRGRGSVGSD TVSPFAAEPPRQSPPPPQQQQSQSQQQRSQPQQQQPRSQPQQQPNDESQGSPVFVKLQEM QDATSSPPPPESKPGQADPPDNIFNALGNEFSHPSGAGRGKPLVESAPIRQEDNRQIRRP PPPPQQQRVQPQQKRAPTVKDGTPKPQLSAEEAGRRARSELSRGEAEGSSVGGRGGRGRG RGRGARGRGRGRGGDGWRDDKKEEEGEQEAMRIFAGDSADGEKFAEKMGPELMKTLAEGF EEICEKALPSTTHDAIIDAYDTNLMIECEPEYIMPDFGSNPDIDEKPPMSLRECLEKVKP FIVAYEGIKDQEEWEEAINEAMTQAPLMKEIVDHYSGPDRVTAKKQNEELDRIATTLPAS APDSVKRFADRAALTLKSNPGWGFDKKYQFMDKLVLEVSQSYK

Transcript Sequence

Transcript ID	AT1G53645.1
Transcript Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr1:20026016-20028756 REVERSE LENGTH=2159 \| 201606
Sequence	CAGGTACTCAAACTACAGGGATGAATTTACAAATATGCAGCAATAAGTCAACAGAAACGG CGACGTTTCGGAAAACCCCCATTTTCCGATTAACACAGTAACTCAAAACCCTCAAATCCT CAATCGCCAGTGTTTACGAAAGTTCTTGAAATTTGAAGAGATCTCACAGATGAGAAGTGC TATAGGAAGAAGATTCTCAAACCCTAATGGCTTCACCATTGCATCCTTAGTCAAACAAAC TCCATTTCTCACCCAATCCACATCTCATTTCTCCTCTTCCTCCGACTCCTCCGGCCGTGG TCGTGGACGCGGTTCCGGTGAAGATGGAGGATTTCCCGCCGCTGGAAGAGGACAATTCGG TGTAAATCGTGAACCGGTGGTTCCTGGACGTGAACCGTCATCTGCCGGAGGTTATGGTCA TGGTCGTGGTCGTCCGATCCAATCTGATTCGATTTCTCCTGCGTTTACGTCATTTGTCAA ATCAGATTCTCCTAGTATTGGCCGTGGAAGAGGATCCGTTGGATCAGACACCGTTTCACC TTTCGCTGCTGAACCTCCTCGCCAATCGCCGCCTCCACCGCAGCAACAACAGTCTCAATC GCAGCAACAGCGTTCACAACCACAACAGCAGCAGCCGCGTTCGCAACCACAGCAGCAGCC TAATGATGAATCTCAGGGAAGTCCTGTATTTGTGAAGCTGCAGGAGATGCAGGACGCAAC TTCGTCTCCACCACCACCAGAGTCTAAACCTGGTCAAGCTGATCCACCTGATAACATATT CAATGCATTAGGAAACGAATTTTCACATCCTAGTGGAGCAGGTCGAGGAAAGCCTCTTGT GGAATCTGCTCCAATCCGACAAGAAGATAACCGCCAAATTCGACGCCCTCCGCCTCCACC GCAGCAGCAGAGAGTACAACCTCAGCAGAAGCGGGCTCCAACGGTCAAAGATGGAACTCC TAAGCCGCAATTGAGTGCGGAAGAGGCTGGAAGAAGAGCAAGGAGTGAGCTTTCGCGTGG TGAAGCTGAAGGAAGCAGTGTGGGAGGAAGAGGAGGGAGAGGGAGAGGGAGAGGAAGAGG AGCAAGAGGGAGAGGCAGAGGAAGAGGTGGTGATGGATGGAGAGATGATAAGAAAGAAGA AGAAGGTGAACAAGAGGCTATGCGTATATTTGCTGGAGATTCAGCTGATGGAGAGAAGTT TGCTGAGAAAATGGGACCTGAATTGATGAAAACGCTTGCGGAAGGTTTTGAGGAAATTTG CGAAAAGGCGTTGCCTTCTACTACTCACGATGCCATTATAGATGCTTATGATACCAATCT CATGATTGAGTGTGAGCCTGAATACATTATGCCAGACTTTGGATCAAATCCTGACATTGA TGAGAAACCACCAATGTCTCTGCGTGAGTGCCTTGAGAAGGTGAAGCCTTTCATAGTGGC TTACGAAGGAATCAAGGATCAAGAAGAATGGGAGGAAGCAATTAATGAAGCGATGACACA GGCTCCCCTTATGAAAGAGATTGTTGATCACTACAGTGGTCCTGATCGTGTAACTGCTAA GAAACAGAACGAGGAACTCGATAGAATTGCTACAACGCTTCCCGCAAGTGCACCTGATTC CGTGAAACGATTTGCAGATCGTGCAGCTCTTACTCTTAAGAGTAATCCAGGTTGGGGATT TGATAAGAAATACCAGTTCATGGACAAGCTCGTTTTAGAGGTGTCACAAAGCTACAAATA GAGAACTCAGGTTTCAAACTTCTTAAAAAACTTCATCGCCGGTTGAGTTTATAGATCGTA CTCTAGATCTTGCCTCTACTTAAAACGGTACCCATTTCTTTTGAACTAGTACTCAAAATT TGGGCGTTAGCTTTTTCGTCATACGTTTTGAGGGTTTCCGTAATAACGGCATTGTTCTTT CGATCTTTGTTACTGAGGAGATTGTATTGTATCCCTTTTCATCAATGGGTTATTAAGGGT TTAAGCCTGTTTTTGGATGTGTAATTGAAAAGAGAATGGTTCTTGAGTGTTGGTTCTAGT GTCTTATACATGCCGTAATAGAGAAGAAAAGAGAGAGAGAGTAGTGTATTTGTTCAATGA AATCTTATCGAATGAACAATTCCGTAAACACACATATGGTCACACTTGCGATAATTGCA