Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G53470.1
CDS Infomation	\| mechanosensitive channel of small conductance-like 4 \| Chr1:19958587-19961578 FORWARD LENGTH=2646 \| 201606
Sequence	ATGGCCGTTGATTCAACTGATCAACGGCGAGATTTTGTTGTAAGGATCGACGGTGAAGAC AATGGTGACTCAGAAAAGTTTTGGAGAGAGTCAAGCATTAACTTCTGGCATAATGATAAG AGCTCTAAACCACCCGGAGGTGAAGAAGACGACGGAAGCTTTGATTTCATGCGGCGGAGT AGTGAGAAATCGGAGGAGCCAGATCCACCGTCGAAGCTTATAAATCAATTTCTCAACAAG CAAAAAGCTTCCGGTGATGAAATCTCTCTCGACATGGAAGCTAACATGCCTGAGCTTCAA AAAAATACGGTTCCTCCTCTGTCGTCAACGGCAGTTTCCGGTTCTGCTTCACCAGTAACC GCGCCAGTGACGGCGAGTTATCGTAATGGAACCGGTGATGCGATTAGACGGAGACAGAAC AGAGTCACGCTTTCTCCGTCTGTTAAAGATGGTGATAGTAGTGAAGATGAAGAAAACAGA GTAGATGGATCAGAGGTTGTGAAGTGTACCTCTAATAGATCGACGATGAGGACTAAGACT TTGATGAAGATGAAGACTAGATCTAGATTGATGGATCCTCCTACTCCGACGTATCCGGAT ATGGTTTCGGGTCGGACTCCAAGGTCCGGGAATCTAAATCCCGGGTTTAGTGGGAGAAAC ACTAAACCGGGAACTCCAAACCAAGGAGGATCCAAGGATTTGGAAGAAGAGGAAGATCCC TTCTCAGAGGAGGATTTACCTGAAGGTTTAAGGAAGGAGAAGATTTGTGTTTGGGTTATT ATAGAATGGATATTTCTGATTTTGATCATTGCTAGTTTGATTTGTAGCCTAGTCATACCT TACTTGCGTGGCAAGACACTTTGGGACCTAGCTCTATGGAAATGGGAAGTGATGGTTCTT GTCTTGATATGTGGGAGATTGGTTTCTAGTTGGATTGTGAAGCTATTCGTTTACTTCGTT GAAAGCAATTTTCTTTGGAGGAAAAAGGTTTTGTATTTCGTTTACGGGATTCGAAAGCCG GTGCAGAATTGTCTATGGCTAGGGCTTGTGTTGATCGCATGGCATTTCTTGTTCGACAAG AAAGTTGAAAGAGAGATGCGAAGTACTGTGCTTAAGTATGTGACTAAAGTATTAATCTGT TTACTTGTTGCTGTTATCATCTGGCTCATAAAGACTTTACTGGTTAAAGTTCTTGCTTCC TCTTTCCATATGAGTACTTACTTCGATCGGATTCAAGAATCGTTGTTTACTCAATACGTG ATTGAGACGCTCTCGGGACCTCCTCGTATTGAGATTCATATAGAAGAGGAGAAAGTAGCA AATGATGTTAAAACCTTCGAGATAGTTGGACGTAAGCTATCTCCTCTAGGTCCAAAGGCG GTTTCTTCTCCACCACAAGTGACTGTTGGAAGCGGAAGGCTGCAGAAGAGTCCAAGCAGA GTTGGGAAAAGTCCGGTGCTTTCGCGGTCTGGTTCTAAGAAAGAAGGAGGGGAAGAAGGG ATACGGATCGATCATTTGCAGAGAATGAACACTAAGAACGTTTCAGCTTGGAAAATGAAG AAACTGATGAATGTTATCAAAAAAGGAACTCTTTCTACTTTAGATGAACAGATACAAGAC ACGACGACTCAGGAAGATGATAAGGCCACACAGATAAGAAGTGAATTCGAAGCAAAACTT GCAGCGAGGAAGATTTTTCAGAATGTTGCTGAGCCTGGATCCAGGTACATATATATGGAA GACTTTATGCGTTTTCTGTCCGAAGATGAGTCTGAAAGAGCAATGGATCTATTTGAAGGA GCTTCTGAATGTCACAAAATCAGCAAATCTTGTCTGAAGAATTGGGTGGTTAATGCCTTT AGAGAACGAAGAGCACTAGCTTTAACATTAAACGATACAAAAACAGCAGTGAACAGGCTT CATCGAATCGTTGATGTATTGGTCAGCATTGTGATTTTAATCATCTGGCTTCTCATTCTG GGAATCGCTACAACCAAGTTCTTGCTTGTCATAAGCTCTCAGCTTCTTCTTGTAGTCTTT GTGTTTGGAAATTCATGTAAAACCATCTTTGAAGCGGTCATCTTCGTCTTCGTTATGCAT CCATTTGATGTCGGTGACAGGTGTGAAATAGACGGTGTCCAGATGATTGTGGAAGAGATG AACATTTTGACTACTGTCTTTCTTCGATTTGATAATCAGAAGATTGTATATCCAAACAGT CTTCTCGGAACAAAACCTATCGCTAACTATTACCGCAGTCCTGATATGCAAGATGCCATT GAATTCTTTGTCCATATAGCAACTCCACCTGAAAAGACAACTGCCTTAAGACAGAGGATA CTCAGCTATGTAGATAACAAGAAGGATCATTGGCATCCATCGCCGATGATTGTGTTTAGA GATATGTGTGGATTAAACAGTGTGAAGATCGCAATGTGGCCAACACATAAGATGAATCAT CAAAATATGGGAGAGAGATATGTGAGGAGAGGTCAATTACTTGAAGAGATTGGTAGATTA TGCAGAGAGTTGGATATCGAATATCGGTTATATCCTCTTAACATCAACGTAAAAAGTCTT CCTGCTGCTACTCCCATCACTTCTGATCGCATTCCTCCTAGCTGGAATCAACAACGCAGT GTTTGA

Peptide Sequence

PEP ID	AT1G53470.1
PEP Infomation	\| mechanosensitive channel of small conductance-like 4 \| Chr1:19958587-19961578 FORWARD LENGTH=881 \| 201606
Sequence	MAVDSTDQRRDFVVRIDGEDNGDSEKFWRESSINFWHNDKSSKPPGGEEDDGSFDFMRRS SEKSEEPDPPSKLINQFLNKQKASGDEISLDMEANMPELQKNTVPPLSSTAVSGSASPVT APVTASYRNGTGDAIRRRQNRVTLSPSVKDGDSSEDEENRVDGSEVVKCTSNRSTMRTKT LMKMKTRSRLMDPPTPTYPDMVSGRTPRSGNLNPGFSGRNTKPGTPNQGGSKDLEEEEDP FSEEDLPEGLRKEKICVWVIIEWIFLILIIASLICSLVIPYLRGKTLWDLALWKWEVMVL VLICGRLVSSWIVKLFVYFVESNFLWRKKVLYFVYGIRKPVQNCLWLGLVLIAWHFLFDK KVEREMRSTVLKYVTKVLICLLVAVIIWLIKTLLVKVLASSFHMSTYFDRIQESLFTQYV IETLSGPPRIEIHIEEEKVANDVKTFEIVGRKLSPLGPKAVSSPPQVTVGSGRLQKSPSR VGKSPVLSRSGSKKEGGEEGIRIDHLQRMNTKNVSAWKMKKLMNVIKKGTLSTLDEQIQD TTTQEDDKATQIRSEFEAKLAARKIFQNVAEPGSRYIYMEDFMRFLSEDESERAMDLFEG ASECHKISKSCLKNWVVNAFRERRALALTLNDTKTAVNRLHRIVDVLVSIVILIIWLLIL GIATTKFLLVISSQLLLVVFVFGNSCKTIFEAVIFVFVMHPFDVGDRCEIDGVQMIVEEM NILTTVFLRFDNQKIVYPNSLLGTKPIANYYRSPDMQDAIEFFVHIATPPEKTTALRQRI LSYVDNKKDHWHPSPMIVFRDMCGLNSVKIAMWPTHKMNHQNMGERYVRRGQLLEEIGRL CRELDIEYRLYPLNINVKSLPAATPITSDRIPPSWNQQRSV

Transcript Sequence

Transcript ID	AT1G53470.1
Transcript Infomation	\| mechanosensitive channel of small conductance-like 4 \| Chr1:19958380-19961827 FORWARD LENGTH=3102 \| 201606
Sequence	GTTCAACATTACCAAAAATAAATAAAACAAAATCAATCAAAAAGATTTAAATATTTAGAA AAATCAACATTACCATTACATCTAGAAATCAAGAACCAACTTTTCTTTTTCCTCTTTCTC AAAAAAATATATAAACGAACGTTTTACTTTGAAGAAAAACAAAAATCTCGGCGAGATTTT ACTATAGAAAGTTTCATTCCTTCTAACATGGCCGTTGATTCAACTGATCAACGGCGAGAT TTTGTTGTAAGGATCGACGGTGAAGACAATGGTGACTCAGAAAAGTTTTGGAGAGAGTCA AGCATTAACTTCTGGCATAATGATAAGAGCTCTAAACCACCCGGAGGTGAAGAAGACGAC GGAAGCTTTGATTTCATGCGGCGGAGTAGTGAGAAATCGGAGGAGCCAGATCCACCGTCG AAGCTTATAAATCAATTTCTCAACAAGCAAAAAGCTTCCGGTGATGAAATCTCTCTCGAC ATGGAAGCTAACATGCCTGAGCTTCAAAAAAATACGGTTCCTCCTCTGTCGTCAACGGCA GTTTCCGGTTCTGCTTCACCAGTAACCGCGCCAGTGACGGCGAGTTATCGTAATGGAACC GGTGATGCGATTAGACGGAGACAGAACAGAGTCACGCTTTCTCCGTCTGTTAAAGATGGT GATAGTAGTGAAGATGAAGAAAACAGAGTAGATGGATCAGAGGTTGTGAAGTGTACCTCT AATAGATCGACGATGAGGACTAAGACTTTGATGAAGATGAAGACTAGATCTAGATTGATG GATCCTCCTACTCCGACGTATCCGGATATGGTTTCGGGTCGGACTCCAAGGTCCGGGAAT CTAAATCCCGGGTTTAGTGGGAGAAACACTAAACCGGGAACTCCAAACCAAGGAGGATCC AAGGATTTGGAAGAAGAGGAAGATCCCTTCTCAGAGGAGGATTTACCTGAAGGTTTAAGG AAGGAGAAGATTTGTGTTTGGGTTATTATAGAATGGATATTTCTGATTTTGATCATTGCT AGTTTGATTTGTAGCCTAGTCATACCTTACTTGCGTGGCAAGACACTTTGGGACCTAGCT CTATGGAAATGGGAAGTGATGGTTCTTGTCTTGATATGTGGGAGATTGGTTTCTAGTTGG ATTGTGAAGCTATTCGTTTACTTCGTTGAAAGCAATTTTCTTTGGAGGAAAAAGGTTTTG TATTTCGTTTACGGGATTCGAAAGCCGGTGCAGAATTGTCTATGGCTAGGGCTTGTGTTG ATCGCATGGCATTTCTTGTTCGACAAGAAAGTTGAAAGAGAGATGCGAAGTACTGTGCTT AAGTATGTGACTAAAGTATTAATCTGTTTACTTGTTGCTGTTATCATCTGGCTCATAAAG ACTTTACTGGTTAAAGTTCTTGCTTCCTCTTTCCATATGAGTACTTACTTCGATCGGATT CAAGAATCGTTGTTTACTCAATACGTGATTGAGACGCTCTCGGGACCTCCTCGTATTGAG ATTCATATAGAAGAGGAGAAAGTAGCAAATGATGTTAAAACCTTCGAGATAGTTGGACGT AAGCTATCTCCTCTAGGTCCAAAGGCGGTTTCTTCTCCACCACAAGTGACTGTTGGAAGC GGAAGGCTGCAGAAGAGTCCAAGCAGAGTTGGGAAAAGTCCGGTGCTTTCGCGGTCTGGT TCTAAGAAAGAAGGAGGGGAAGAAGGGATACGGATCGATCATTTGCAGAGAATGAACACT AAGAACGTTTCAGCTTGGAAAATGAAGAAACTGATGAATGTTATCAAAAAAGGAACTCTT TCTACTTTAGATGAACAGATACAAGACACGACGACTCAGGAAGATGATAAGGCCACACAG ATAAGAAGTGAATTCGAAGCAAAACTTGCAGCGAGGAAGATTTTTCAGAATGTTGCTGAG CCTGGATCCAGGTACATATATATGGAAGACTTTATGCGTTTTCTGTCCGAAGATGAGTCT GAAAGAGCAATGGATCTATTTGAAGGAGCTTCTGAATGTCACAAAATCAGCAAATCTTGT CTGAAGAATTGGGTGGTTAATGCCTTTAGAGAACGAAGAGCACTAGCTTTAACATTAAAC GATACAAAAACAGCAGTGAACAGGCTTCATCGAATCGTTGATGTATTGGTCAGCATTGTG ATTTTAATCATCTGGCTTCTCATTCTGGGAATCGCTACAACCAAGTTCTTGCTTGTCATA AGCTCTCAGCTTCTTCTTGTAGTCTTTGTGTTTGGAAATTCATGTAAAACCATCTTTGAA GCGGTCATCTTCGTCTTCGTTATGCATCCATTTGATGTCGGTGACAGGTGTGAAATAGAC GGTGTCCAGATGATTGTGGAAGAGATGAACATTTTGACTACTGTCTTTCTTCGATTTGAT AATCAGAAGATTGTATATCCAAACAGTCTTCTCGGAACAAAACCTATCGCTAACTATTAC CGCAGTCCTGATATGCAAGATGCCATTGAATTCTTTGTCCATATAGCAACTCCACCTGAA AAGACAACTGCCTTAAGACAGAGGATACTCAGCTATGTAGATAACAAGAAGGATCATTGG CATCCATCGCCGATGATTGTGTTTAGAGATATGTGTGGATTAAACAGTGTGAAGATCGCA ATGTGGCCAACACATAAGATGAATCATCAAAATATGGGAGAGAGATATGTGAGGAGAGGT CAATTACTTGAAGAGATTGGTAGATTATGCAGAGAGTTGGATATCGAATATCGGTTATAT CCTCTTAACATCAACGTAAAAAGTCTTCCTGCTGCTACTCCCATCACTTCTGATCGCATT CCTCCTAGCTGGAATCAACAACGCAGTGTTTGAAGATTGGAAAATTTTGAGTACTTTTTG GTGTTTTTGGTATTTGCAGTGAGTGAAAAAGAGAGATTTTTCTGTCTTCATTTTCTTTCT CTTTTATTGTTTTAAGGACTTGAGGATTCTTCATTTTCATTGCAAAAAGCGAGTCTGCTT TTGTGTATATCTGTGTTGAGTGGTTATAGACTTATAGTCGATAAAATAAAAAGCTTACAG CATTTGAATCTTTATATTAATGTTACGTAAGTACCTTTAAAA