Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G52620.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:19603828-19606287 FORWARD LENGTH=2460 \| 201606
Sequence	ATGTCTAAAACCCTTCTCTCTCGCATCAAACCTCTCTCCAATCCTCATGCATCTAATTCC TTCCGATCTCATCTTCCGATTACTCCCCGTATCAAGAAACTAGTCAGCGACACTGTATCC ATCCTCAAAACCCAACAAAACTGGTCTCAAATTCTCGACGATTGCTTCGCTGATGAAGAA GTCCGCTTTGTCGACATTTCACCTTTCGTATTCGATCGAATCCAGGATGTTGAAATCGGC GTTAAGCTTTTTGATTGGCTATCGAGTGAGAAGAAAGATGAGTTCTTTTCTAATGGGTTC GCTTGTTCTTCGTTTCTGAAGCTCTTAGCGAGGTATAGGATCTTCAATGAGATTGAAGAT GTGTTGGGTAATCTCAGAAACGAAAATGTGAAGCTTACACATGAAGCATTGAGTCATGTT CTTCACGCTTATGCTGAATCTGGAAGTTTAAGTAAAGCAGTGGAGATTTATGATTATGTT GTTGAGTTATATGATTCTGTGCCTGATGTTATTGCTTGTAACTCGTTGTTGAGTTTATTG GTGAAAAGTAGGAGACTTGGAGATGCACGGAAGGTGTATGACGAAATGTGTGATAGAGGT GATAGTGTTGATAATTACAGTACTTGTATATTGGTCAAGGGTATGTGTAATGAAGGAAAG GTAGAAGTAGGTAGAAAGCTGATTGAAGGTCGATGGGGTAAAGGTTGTATTCCGAATATT GTGTTCTACAACACAATCATTGGTGGATACTGCAAGCTGGGCGATATCGAAAATGCGTAT TTAGTTTTCAAGGAGTTGAAGTTGAAGGGATTTATGCCTACTTTGGAAACTTTTGGTACA ATGATTAACGGGTTCTGCAAGGAAGGGGATTTTGTGGCGAGTGATCGACTTTTGAGTGAA GTGAAAGAAAGGGGTTTAAGGGTTAGTGTTTGGTTCCTTAATAATATCATTGATGCTAAG TATAGGCACGGTTATAAGGTTGATCCTGCTGAGAGTATAGGATGGATAATAGCTAATGAC TGCAAGCCTGATGTAGCAACATATAACATTTTGATTAATCGCTTGTGTAAAGAAGGGAAA AAGGAGGTCGCTGTTGGGTTTTTGGATGAAGCATCAAAGAAAGGGTTGATTCCAAACAAT TTAAGCTATGCCCCTCTGATACAAGCCTATTGCAAAAGTAAAGAGTATGATATTGCTTCT AAGTTGCTTCTACAGATGGCTGAAAGAGGATGCAAACCAGATATAGTTACGTATGGAATT CTTATCCATGGTCTTGTTGTTTCAGGCCATATGGATGATGCAGTTAATATGAAAGTTAAA TTGATAGATAGAGGAGTTTCACCGGATGCCGCCATCTACAATATGTTGATGAGTGGATTG TGCAAGACCGGTAGGTTTTTACCTGCCAAACTCCTCTTCTCGGAGATGCTTGACCGGAAT ATCTTACCAGATGCTTATGTTTATGCCACGCTCATAGATGGATTCATCAGAAGTGGTGAT TTTGATGAGGCAAGGAAAGTTTTCAGTCTCTCAGTCGAAAAGGGTGTGAAGGTTGATGTC GTGCACCACAATGCTATGATAAAAGGGTTTTGCAGATCTGGAATGTTGGATGAGGCATTG GCGTGCATGAATAGGATGAATGAAGAACACCTTGTACCCGATAAGTTTACTTATTCCACA ATTATTGACGGATATGTAAAGCAACAGGATATGGCTACTGCCATAAAGATTTTTCGATAC ATGGAGAAGAATAAATGTAAGCCAAACGTTGTAACATACACATCACTTATCAATGGTTTT TGTTGCCAAGGAGACTTCAAAATGGCTGAAGAGACTTTCAAAGAGATGCAATTGCGGGAC CTTGTGCCTAACGTTGTCACCTACACAACACTTATTCGAAGTCTTGCTAAAGAGAGTAGT ACCCTTGAAAAAGCAGTTTACTATTGGGAGCTAATGATGACAAACAAATGTGTTCCTAAT GAAGTTACCTTCAATTGTCTACTTCAGGGATTTGTGAAGAAAACATCTGGAAAAGTTCTT GCTGAACCGGATGGTTCTAATCATGGACAAAGTTCTCTGTTTTCTGAGTTTTTCCATAGA ATGAAATCAGATGGGTGGTCGGACCACGCTGCTGCTTACAATTCTGCCCTTGTTTGTCTC TGTGTACATGGAATGGTGAAGACCGCATGCATGTTTCAGGATAAGATGGTGAAGAAAGGC TTCTCTCCTGATCCTGTTTCATTTGCTGCTATTTTACATGGTTTTTGTGTGGTTGGGAAC TCAAAGCAATGGAGGAACATGGACTTCTGCAATCTGGGTGAGAAGGGTCTTGAAGTAGCT GTTAGGTATTCGCAGGTTTTAGAGCAACACTTACCTCAACCAGTGATATGCGAGGCTTCA ACTATTTTGCATGCAATGGTTGAAAAAGCTGACACCAAAGAACCGGTAGAATCTCCGTAA

Peptide Sequence

PEP ID	AT1G52620.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:19603828-19606287 FORWARD LENGTH=819 \| 201606
Sequence	MSKTLLSRIKPLSNPHASNSFRSHLPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEE VRFVDISPFVFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIED VLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLL VKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNI VFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGK KEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGI LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL ACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF CCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPN EVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCL CVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVA VRYSQVLEQHLPQPVICEASTILHAMVEKADTKEPVESP

Transcript Sequence

Transcript ID	AT1G52620.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:19603796-19606287 FORWARD LENGTH=2492 \| 201606
Sequence	GTTGACGACGAAACCACTCACCGTCGTCTGTAATGTCTAAAACCCTTCTCTCTCGCATCA AACCTCTCTCCAATCCTCATGCATCTAATTCCTTCCGATCTCATCTTCCGATTACTCCCC GTATCAAGAAACTAGTCAGCGACACTGTATCCATCCTCAAAACCCAACAAAACTGGTCTC AAATTCTCGACGATTGCTTCGCTGATGAAGAAGTCCGCTTTGTCGACATTTCACCTTTCG TATTCGATCGAATCCAGGATGTTGAAATCGGCGTTAAGCTTTTTGATTGGCTATCGAGTG AGAAGAAAGATGAGTTCTTTTCTAATGGGTTCGCTTGTTCTTCGTTTCTGAAGCTCTTAG CGAGGTATAGGATCTTCAATGAGATTGAAGATGTGTTGGGTAATCTCAGAAACGAAAATG TGAAGCTTACACATGAAGCATTGAGTCATGTTCTTCACGCTTATGCTGAATCTGGAAGTT TAAGTAAAGCAGTGGAGATTTATGATTATGTTGTTGAGTTATATGATTCTGTGCCTGATG TTATTGCTTGTAACTCGTTGTTGAGTTTATTGGTGAAAAGTAGGAGACTTGGAGATGCAC GGAAGGTGTATGACGAAATGTGTGATAGAGGTGATAGTGTTGATAATTACAGTACTTGTA TATTGGTCAAGGGTATGTGTAATGAAGGAAAGGTAGAAGTAGGTAGAAAGCTGATTGAAG GTCGATGGGGTAAAGGTTGTATTCCGAATATTGTGTTCTACAACACAATCATTGGTGGAT ACTGCAAGCTGGGCGATATCGAAAATGCGTATTTAGTTTTCAAGGAGTTGAAGTTGAAGG GATTTATGCCTACTTTGGAAACTTTTGGTACAATGATTAACGGGTTCTGCAAGGAAGGGG ATTTTGTGGCGAGTGATCGACTTTTGAGTGAAGTGAAAGAAAGGGGTTTAAGGGTTAGTG TTTGGTTCCTTAATAATATCATTGATGCTAAGTATAGGCACGGTTATAAGGTTGATCCTG CTGAGAGTATAGGATGGATAATAGCTAATGACTGCAAGCCTGATGTAGCAACATATAACA TTTTGATTAATCGCTTGTGTAAAGAAGGGAAAAAGGAGGTCGCTGTTGGGTTTTTGGATG AAGCATCAAAGAAAGGGTTGATTCCAAACAATTTAAGCTATGCCCCTCTGATACAAGCCT ATTGCAAAAGTAAAGAGTATGATATTGCTTCTAAGTTGCTTCTACAGATGGCTGAAAGAG GATGCAAACCAGATATAGTTACGTATGGAATTCTTATCCATGGTCTTGTTGTTTCAGGCC ATATGGATGATGCAGTTAATATGAAAGTTAAATTGATAGATAGAGGAGTTTCACCGGATG CCGCCATCTACAATATGTTGATGAGTGGATTGTGCAAGACCGGTAGGTTTTTACCTGCCA AACTCCTCTTCTCGGAGATGCTTGACCGGAATATCTTACCAGATGCTTATGTTTATGCCA CGCTCATAGATGGATTCATCAGAAGTGGTGATTTTGATGAGGCAAGGAAAGTTTTCAGTC TCTCAGTCGAAAAGGGTGTGAAGGTTGATGTCGTGCACCACAATGCTATGATAAAAGGGT TTTGCAGATCTGGAATGTTGGATGAGGCATTGGCGTGCATGAATAGGATGAATGAAGAAC ACCTTGTACCCGATAAGTTTACTTATTCCACAATTATTGACGGATATGTAAAGCAACAGG ATATGGCTACTGCCATAAAGATTTTTCGATACATGGAGAAGAATAAATGTAAGCCAAACG TTGTAACATACACATCACTTATCAATGGTTTTTGTTGCCAAGGAGACTTCAAAATGGCTG AAGAGACTTTCAAAGAGATGCAATTGCGGGACCTTGTGCCTAACGTTGTCACCTACACAA CACTTATTCGAAGTCTTGCTAAAGAGAGTAGTACCCTTGAAAAAGCAGTTTACTATTGGG AGCTAATGATGACAAACAAATGTGTTCCTAATGAAGTTACCTTCAATTGTCTACTTCAGG GATTTGTGAAGAAAACATCTGGAAAAGTTCTTGCTGAACCGGATGGTTCTAATCATGGAC AAAGTTCTCTGTTTTCTGAGTTTTTCCATAGAATGAAATCAGATGGGTGGTCGGACCACG CTGCTGCTTACAATTCTGCCCTTGTTTGTCTCTGTGTACATGGAATGGTGAAGACCGCAT GCATGTTTCAGGATAAGATGGTGAAGAAAGGCTTCTCTCCTGATCCTGTTTCATTTGCTG CTATTTTACATGGTTTTTGTGTGGTTGGGAACTCAAAGCAATGGAGGAACATGGACTTCT GCAATCTGGGTGAGAAGGGTCTTGAAGTAGCTGTTAGGTATTCGCAGGTTTTAGAGCAAC ACTTACCTCAACCAGTGATATGCGAGGCTTCAACTATTTTGCATGCAATGGTTGAAAAAG CTGACACCAAAGAACCGGTAGAATCTCCGTAA