Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G52240.1
CDS Infomation	\| rop guanine nucleotide exchange factor-like protein \| Chr1:19455766-19457878 REVERSE LENGTH=1632 \| 201606
Sequence	ATGGTAAAAGCAATGGAGCAAGAACAAGAGACTTACAAATCAAGATTGTTTCATTTCAAG AACATGAACGAAAACTCAGCTTCAAGACATGTTAAAAGCTGGAGCTCAGATTGTGCAATG AGAATGGATGGTTCTGACAATTTGGATGATGATGATAATGACATGATGATGTTTAGGAGT CAACCCGGAAAATGTGGCAGCGTTGACCGACCTTCTTTGCCTATAGGCGGAGTAACGCCT AATCGCAATGACAAGCTTCCGAGAGTCTCTTCATCGGATTCCATGGAGGCACTAATAATA TTGCAAGCAGCAATGGAGCAAATGAAAGAGAAATTTTCGAAATTGCTTCTTGGAGAAGAT ATGTCAGGAGGAGGAAAAGGTGTTTCATCGGCTTTGGCTTTATCTAACGCCATTACCAAT CTCGCAGCGTCTGCGTTTGGAGAACAACGGCGTTTAGAGCCAATGGCGGTGGATAGAAAA ACGCGTTGGAGGAGAGAAATTGGATGGCTTATCTCTGTGGCTGATTATATAGTTGAATTC GCTCCAACACAACAAACAAACAAAGATGGTACTTCAATGGAAGTCATGTCAACAAGACAA AGAACAGATCTTCTCTGTAACATCCCTGCACTTAAGAAACTCGATGCTATGCTTCTCGAT TGTCTTGATAAATTCAAGGATCAGGATGAGTTTTATTATGTTAAAAAAGATTCTCCTGAT TCTTGCGAGACAAGGAACGATGAGAAATGGTGGTTACCGGCAGTAAAAGTCCCACCTAAC GGCCTCTCAGAGATATCAAGAAGGTTTCTACAGAGCCAGAAGGAATGTGTGAATCAAGTC CTTAAAGCTGCAATGGCGATAAACGCTCAAGTTCTGTCTGAAATGGAGATTCCTGAAAGC TACCTTGAGTCACTTCCTAAGAATGGGAGAGCTAGCTTGGGAGATGTGATATACAGAATG ATAACAGTAGAGATGTTTGATGCAGATCAATTCCTAATTGAAATGGATTTATCATCTGAG CACAAGATTCTTGATCTAAAGAACAGAATCGAAGCATCGATTGTGATATGGAAGAGGAAA ATGGTGCAGAAGGACACAAAGTCTCCTTGGGGATCAACAGTGAGTATTGAGAAAAGAGAA CAGTTTGAAGAAAGAGCTGAAACCATCTTGCTACTATTAAAACAAGGGTTTCCCGGAATC TCACAGTCCTCGCTCGATATCAGCAAGATTCAATTCAACAGAGATGTAGGACTTGCGATA TTGGAGAGTTATTCAAGAGTGCTTGAGAGTTTAGCTCACACCGTGATGTCGAGAATAGAA GACGTGCTTTACGCTGATCAGCTTACTCAAGAACCTACAAATAATGCACCTTCTAAGAAC AGATATAGCTTGAAGGAGAATGAGAAACTAAGAGAGGAAAGACTAAGTTTCACAGAGGAT ATGGCTTCAGGAACACTTTCTGATGTTATGCAATGGGGTAACAAAAACAATGAAATGAAG AAAGAAAGCTTTTTCGGAGATAGAGAGAAACCGTTGTTGTCGAAAGTCACAGGTATAATG ACTAACAACAAGAAGAGTTCTTATCTTGATAATCTTGGAGCTATGAGGAGTCCAACCGCA AGATACTCCTGA

Peptide Sequence

PEP ID	AT1G52240.1
PEP Infomation	\| rop guanine nucleotide exchange factor-like protein \| Chr1:19455766-19457878 REVERSE LENGTH=543 \| 201606
Sequence	MVKAMEQEQETYKSRLFHFKNMNENSASRHVKSWSSDCAMRMDGSDNLDDDDNDMMMFRS QPGKCGSVDRPSLPIGGVTPNRNDKLPRVSSSDSMEALIILQAAMEQMKEKFSKLLLGED MSGGGKGVSSALALSNAITNLAASAFGEQRRLEPMAVDRKTRWRREIGWLISVADYIVEF APTQQTNKDGTSMEVMSTRQRTDLLCNIPALKKLDAMLLDCLDKFKDQDEFYYVKKDSPD SCETRNDEKWWLPAVKVPPNGLSEISRRFLQSQKECVNQVLKAAMAINAQVLSEMEIPES YLESLPKNGRASLGDVIYRMITVEMFDADQFLIEMDLSSEHKILDLKNRIEASIVIWKRK MVQKDTKSPWGSTVSIEKREQFEERAETILLLLKQGFPGISQSSLDISKIQFNRDVGLAI LESYSRVLESLAHTVMSRIEDVLYADQLTQEPTNNAPSKNRYSLKENEKLREERLSFTED MASGTLSDVMQWGNKNNEMKKESFFGDREKPLLSKVTGIMTNNKKSSYLDNLGAMRSPTA RYS

Transcript Sequence

Transcript ID	AT1G52240.1
Transcript Infomation	\| rop guanine nucleotide exchange factor-like protein \| Chr1:19455495-19458069 REVERSE LENGTH=2094 \| 201606
Sequence	GTGTTCTGTATTTGCTAAGTCTGAAATTAAAATCAAACACCGTTTTTTGGTTAATTAAGT TTGTTTTTTCTTCATGATCTCCTAAAACTCCTCTTTATTACACGAAGAGGAGAACAAATG GAGATTAAAAAGAATTTTCAAATCATAGAAATCTTTTCATTTTTTTTATTGTTTTGATTA ACTAGTAATTAATGGTAAAAGCAATGGAGCAAGAACAAGAGACTTACAAATCAAGATTGT TTCATTTCAAGAACATGAACGAAAACTCAGCTTCAAGACATGTTAAAAGCTGGAGCTCAG ATTGTGCAATGAGAATGGATGGTTCTGACAATTTGGATGATGATGATAATGACATGATGA TGTTTAGGAGTCAACCCGGAAAATGTGGCAGCGTTGACCGACCTTCTTTGCCTATAGGCG GAGTAACGCCTAATCGCAATGACAAGCTTCCGAGAGTCTCTTCATCGGATTCCATGGAGG CACTAATAATATTGCAAGCAGCAATGGAGCAAATGAAAGAGAAATTTTCGAAATTGCTTC TTGGAGAAGATATGTCAGGAGGAGGAAAAGGTGTTTCATCGGCTTTGGCTTTATCTAACG CCATTACCAATCTCGCAGCGTCTGCGTTTGGAGAACAACGGCGTTTAGAGCCAATGGCGG TGGATAGAAAAACGCGTTGGAGGAGAGAAATTGGATGGCTTATCTCTGTGGCTGATTATA TAGTTGAATTCGCTCCAACACAACAAACAAACAAAGATGGTACTTCAATGGAAGTCATGT CAACAAGACAAAGAACAGATCTTCTCTGTAACATCCCTGCACTTAAGAAACTCGATGCTA TGCTTCTCGATTGTCTTGATAAATTCAAGGATCAGGATGAGTTTTATTATGTTAAAAAAG ATTCTCCTGATTCTTGCGAGACAAGGAACGATGAGAAATGGTGGTTACCGGCAGTAAAAG TCCCACCTAACGGCCTCTCAGAGATATCAAGAAGGTTTCTACAGAGCCAGAAGGAATGTG TGAATCAAGTCCTTAAAGCTGCAATGGCGATAAACGCTCAAGTTCTGTCTGAAATGGAGA TTCCTGAAAGCTACCTTGAGTCACTTCCTAAGAATGGGAGAGCTAGCTTGGGAGATGTGA TATACAGAATGATAACAGTAGAGATGTTTGATGCAGATCAATTCCTAATTGAAATGGATT TATCATCTGAGCACAAGATTCTTGATCTAAAGAACAGAATCGAAGCATCGATTGTGATAT GGAAGAGGAAAATGGTGCAGAAGGACACAAAGTCTCCTTGGGGATCAACAGTGAGTATTG AGAAAAGAGAACAGTTTGAAGAAAGAGCTGAAACCATCTTGCTACTATTAAAACAAGGGT TTCCCGGAATCTCACAGTCCTCGCTCGATATCAGCAAGATTCAATTCAACAGAGATGTAG GACTTGCGATATTGGAGAGTTATTCAAGAGTGCTTGAGAGTTTAGCTCACACCGTGATGT CGAGAATAGAAGACGTGCTTTACGCTGATCAGCTTACTCAAGAACCTACAAATAATGCAC CTTCTAAGAACAGATATAGCTTGAAGGAGAATGAGAAACTAAGAGAGGAAAGACTAAGTT TCACAGAGGATATGGCTTCAGGAACACTTTCTGATGTTATGCAATGGGGTAACAAAAACA ATGAAATGAAGAAAGAAAGCTTTTTCGGAGATAGAGAGAAACCGTTGTTGTCGAAAGTCA CAGGTATAATGACTAACAACAAGAAGAGTTCTTATCTTGATAATCTTGGAGCTATGAGGA GTCCAACCGCAAGATACTCCTGAGAGAAACCGGTTTCTTTTTTCCGTTCTTGTTAAATTA GGGCTTCTTACTGCATTTTCAATCTGCTTAAAGATTCCACAAAATGCACCATTGTGTGTT GTAGCAGACTTGAAATGCAATTTCATTGATTCATCATAACTGATTTTCAGAATCACTAGC TTACAAAGCAATTAACACAACACAGTACAATATACATAAATAGGGTTCATAGAATTGGGG AGAAAGTTTCTGACTTTTTGAAAGATTTTAGAAAGCTAATTTAAAGCTTGCCGC