Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT1G50400.1
CDS Infomation

| Eukaryotic porin family protein | Chr1:18668155-18670322 FORWARD LENGTH=933 | 201606
Sequence

ATGGAGGGCTTTTCACCACCGATTAACACTGCGCAAGTCGATGCAAAGACCAAACTTGAC
GAGAAAGTGGATTACTCAAACCTCCCTTGCCCTGTCCTCTATGAGGAACTCAACCGTGAA
GCTACCATGGCTTTAAAGCCAGAGCTATTTGAGGGTTTCCGCCTCGACTATAACAAGTCG
CTTAACCAGAAGTTTTTTCTCAGCCATAGCATATTGATGGGGCCAACTGAGGTTCCTAAT
CCAACTCCATCATCCGAAATAATCAAAATTCCAACTGCCAATTATGACTTTGGTGCTGGT
TTCATCGATCCAAAGCTATATCTTATCGGAAGGATCACGACGGACGGTAGACTAAATGCG
AGAGCCAAGTTCGATTTAACTGACAATTTTTCCGTCAAGGCTAATGCTCTGCTGACAGAT
GAAGAAGATAAGTCGCAAGGCCACCTCGTCATTGATTACAAGGGGTCTGACTACAGAACT
CAGCTTCAGCTTGGAAACAATTCCGTTTATGCAGCTAACTATATTCAGCATGTGACACCA
CACCTGTCTTTGGGTGGTGAGGCTTTCTGGCTTGGTCAGCAACTGATGTCGGGTGTTGGT
TATGCAGCTCGATATGAGACTGACAAAACGGTTGCCTCTGGGCAAATTGCTTCCACTGGT
GTGGCTGTCATGAACTATGTTCATAAGGTTTCAGAGAAGTTGTCATTTGCAACGGATTTC
ATCTACAATTATTTGTCACGAGATGTTACAGCTAGTGTCGGGTATGACCTCATTACTAGA
CAGTCTCGATTAAGAGGAAAGGTTGATTCTAACGGTGTTGTCGCTGCTTACCTTGAAGAA
CAATTGCCTATTGGACTCAGATTTCTTCTATCTGCAGAGGTGGATCATGTGAAGAAGGAT
TACAAGTTTGGTTTCGGTGTTAACGCCTTTTAA

Peptide Sequence

PEP ID

AT1G50400.1
PEP Infomation

| Eukaryotic porin family protein | Chr1:18668155-18670322 FORWARD LENGTH=310 | 201606
Sequence

MEGFSPPINTAQVDAKTKLDEKVDYSNLPCPVLYEELNREATMALKPELFEGFRLDYNKS
LNQKFFLSHSILMGPTEVPNPTPSSEIIKIPTANYDFGAGFIDPKLYLIGRITTDGRLNA
RAKFDLTDNFSVKANALLTDEEDKSQGHLVIDYKGSDYRTQLQLGNNSVYAANYIQHVTP
HLSLGGEAFWLGQQLMSGVGYAARYETDKTVASGQIASTGVAVMNYVHKVSEKLSFATDF
IYNYLSRDVTASVGYDLITRQSRLRGKVDSNGVVAAYLEEQLPIGLRFLLSAEVDHVKKD
YKFGFGVNAF

Transcript Sequence

Transcript ID

AT1G50400.1
Transcript Infomation

| Eukaryotic porin family protein | Chr1:18668010-18670576 FORWARD LENGTH=1332 | 201606
Sequence

CTAAGATTGACACGATTACAAAACCCTTGACGCACACGCAGAGTCAAAACCCAAAAACCC
TTGAAAGACTCTTCGTCTTCGATTCCTCTGCAGTTTTCTCTTTTAGCGACCCAAAAAAGT
TCTTCCTTGACGGTAAACAGCAGCGATGGAGGGCTTTTCACCACCGATTAACACTGCGCA
AGTCGATGCAAAGACCAAACTTGACGAGAAAGTGGATTACTCAAACCTCCCTTGCCCTGT
CCTCTATGAGGAACTCAACCGTGAAGCTACCATGGCTTTAAAGCCAGAGCTATTTGAGGG
TTTCCGCCTCGACTATAACAAGTCGCTTAACCAGAAGTTTTTTCTCAGCCATAGCATATT
GATGGGGCCAACTGAGGTTCCTAATCCAACTCCATCATCCGAAATAATCAAAATTCCAAC
TGCCAATTATGACTTTGGTGCTGGTTTCATCGATCCAAAGCTATATCTTATCGGAAGGAT
CACGACGGACGGTAGACTAAATGCGAGAGCCAAGTTCGATTTAACTGACAATTTTTCCGT
CAAGGCTAATGCTCTGCTGACAGATGAAGAAGATAAGTCGCAAGGCCACCTCGTCATTGA
TTACAAGGGGTCTGACTACAGAACTCAGCTTCAGCTTGGAAACAATTCCGTTTATGCAGC
TAACTATATTCAGCATGTGACACCACACCTGTCTTTGGGTGGTGAGGCTTTCTGGCTTGG
TCAGCAACTGATGTCGGGTGTTGGTTATGCAGCTCGATATGAGACTGACAAAACGGTTGC
CTCTGGGCAAATTGCTTCCACTGGTGTGGCTGTCATGAACTATGTTCATAAGGTTTCAGA
GAAGTTGTCATTTGCAACGGATTTCATCTACAATTATTTGTCACGAGATGTTACAGCTAG
TGTCGGGTATGACCTCATTACTAGACAGTCTCGATTAAGAGGAAAGGTTGATTCTAACGG
TGTTGTCGCTGCTTACCTTGAAGAACAATTGCCTATTGGACTCAGATTTCTTCTATCTGC
AGAGGTGGATCATGTGAAGAAGGATTACAAGTTTGGTTTCGGTGTTAACGCCTTTTAATT
CCATCAAATGGCCTTCACAATTAGTTAGAAACCTCAAGATTTGGTTATTTTTTGATGTTC
AGTTTTTTTAGTTTAGATATTTTTACTGTATTGCTCCCACAAGAATAAAAGCCAAGGAGG
TTTCTTCATTTCACATTGAGGAAGAGCCTTTCTTGTTTATTATTTAATTTAATTAATGTG
TAAACATCAGAACTCTTTTTTTGTTAGATTTAACTTTGGGAGAACTATGAAAATAGTCTA
AATTTTCTTTTA