Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G50270.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:18622044-18623834 FORWARD LENGTH=1791 \| 201606
Sequence	ATGATTGAGCTCAAAACATTGCTTGATCTTCCATTACACTTTCTTCATCTCAAGCAGATC CATTGCTTACTCCTAACTTCTCCGATATTCTATACTCGTCGCGATCTCTTTCTCTCACGT CTTCTCCGTCGCTGCTGCACCGCCGCAACTCAATTCCGCTACGCTCGTCGTTTATTATGT CAACTCCAAACTCTGAGCATTCAACTATGGGATTCGCTCATTGGTCACTTCTCCGGCGGG ATTACTCTCAACCGTCGGTTATCATTTCTTGCTTATCGTCATATGCGGCGAAACGGCGTC ATCCCTAGCCGCCACACGTTTCCTCCGCTTCTCAAAGCGGTTTTCAAACTGAGAGACTCG AACCCGTTTCAGTTTCATGCTCATATCGTTAAATTCGGGTTGGATTCGGATCCTTTTGTC AGGAATTCGTTGATTTCGGGTTATTCTAGTTCTGGGTTATTCGATTTTGCAAGTCGTCTT TTTGATGGAGCTGAAGATAAGGACGTGGTTACTTGGACTGCAATGATTGATGGGTTTGTG AGAAATGGTTCTGCTTCGGAAGCAATGGTGTATTTCGTGGAGATGAAGAAGACTGGAGTC GCGGCTAACGAAATGACCGTTGTTAGCGTCTTGAAAGCTGCAGGGAAGGTTGAAGATGTT CGATTTGGGAGAAGCGTTCATGGGCTTTACTTAGAAACAGGGAGAGTGAAATGCGATGTG TTCATAGGAAGTTCTCTAGTAGATATGTATGGGAAATGTAGTTGTTATGATGATGCCCAG AAAGTGTTCGATGAAATGCCTAGCAGAAACGTGGTTACTTGGACGGCGTTGATTGCTGGA TATGTGCAAAGCCGTTGCTTCGATAAAGGGATGTTGGTTTTCGAGGAGATGTTAAAGAGT GATGTTGCGCCTAATGAGAAGACTCTAAGCAGTGTTCTTTCGGCGTGCGCTCATGTCGGG GCACTTCACCGAGGAAGAAGGGTGCATTGTTATATGATTAAGAATTCGATTGAGATAAAC ACTACAGCTGGAACTACATTGATTGATCTTTATGTCAAGTGCGGGTGTTTAGAGGAAGCT ATACTTGTTTTTGAGAGACTTCATGAGAAAAATGTGTATACTTGGACCGCGATGATTAAT GGATTTGCAGCACACGGATATGCTAGAGATGCATTTGATCTCTTTTATACCATGTTGAGT AGTCATGTTTCACCAAATGAAGTTACTTTCATGGCTGTCTTAAGTGCCTGCGCTCATGGA GGTCTTGTGGAAGAGGGTCGAAGGCTTTTCCTGAGCATGAAGGGACGTTTCAATATGGAG CCAAAAGCGGATCACTATGCGTGTATGGTTGATTTATTTGGAAGAAAAGGTTTGCTAGAA GAGGCGAAAGCTTTGATAGAAAGAATGCCAATGGAGCCAACAAATGTGGTATGGGGAGCT CTGTTCGGCTCTTGTTTGTTACACAAAGACTATGAGTTAGGTAAATACGCAGCCTCCCGT GTGATCAAGCTGCAACCTAGTCATAGTGGGAGATACACTCTCTTGGCTAATTTGTACTCG GAATCCCAAAACTGGGATGAAGTCGCTCGGGTAAGAAAGCAAATGAAAGATCAACAGGTG GTGAAATCGCCAGGATTTAGTTGGATCGAAGTGAAAGGCAAGCTTTGTGAATTCATAGCT TTCGATGATAAGAAACCCCTTGAATCTGATGATTTGTACAAGACTCTCGACACTGTTGGG GTGCAAATGAGATTGCCAGATGAATTGGAAGATGTGACTGCTGAATCATGA

Peptide Sequence

PEP ID	AT1G50270.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:18622044-18623834 FORWARD LENGTH=596 \| 201606
Sequence	MIELKTLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLC QLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDS NPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFV RNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDV FIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA ILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHG GLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGA LFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQV VKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRLPDELEDVTAES

Transcript Sequence

Transcript ID	AT1G50270.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:18622017-18624250 FORWARD LENGTH=2225 \| 201606
Sequence	GCTTACTTCTCAATTCACATGATTGAGCTCAAAACATTGCTTGATCTTCCATTACACTTT CTTCATCTCAAGCAGATCCATTGCTTACTCCTAACTTCTCCGATATTCTATACTCGTCGC GATCTCTTTCTCTCACGTCTTCTCCGTCGCTGCTGCACCGCCGCAACTCAATTCCGCTAC GCTCGTCGTTTATTATGTCAACTCCAAACTCTGAGCATTCAACTATGGGATTCGCTCATT GGTCACTTCTCCGGCGGGATTACTCTCAACCGTCGGTTATCATTTCTTGCTTATCGTCAT ATGCGGCGAAACGGCGTCATCCCTAGCCGCCACACGTTTCCTCCGCTTCTCAAAGCGGTT TTCAAACTGAGAGACTCGAACCCGTTTCAGTTTCATGCTCATATCGTTAAATTCGGGTTG GATTCGGATCCTTTTGTCAGGAATTCGTTGATTTCGGGTTATTCTAGTTCTGGGTTATTC GATTTTGCAAGTCGTCTTTTTGATGGAGCTGAAGATAAGGACGTGGTTACTTGGACTGCA ATGATTGATGGGTTTGTGAGAAATGGTTCTGCTTCGGAAGCAATGGTGTATTTCGTGGAG ATGAAGAAGACTGGAGTCGCGGCTAACGAAATGACCGTTGTTAGCGTCTTGAAAGCTGCA GGGAAGGTTGAAGATGTTCGATTTGGGAGAAGCGTTCATGGGCTTTACTTAGAAACAGGG AGAGTGAAATGCGATGTGTTCATAGGAAGTTCTCTAGTAGATATGTATGGGAAATGTAGT TGTTATGATGATGCCCAGAAAGTGTTCGATGAAATGCCTAGCAGAAACGTGGTTACTTGG ACGGCGTTGATTGCTGGATATGTGCAAAGCCGTTGCTTCGATAAAGGGATGTTGGTTTTC GAGGAGATGTTAAAGAGTGATGTTGCGCCTAATGAGAAGACTCTAAGCAGTGTTCTTTCG GCGTGCGCTCATGTCGGGGCACTTCACCGAGGAAGAAGGGTGCATTGTTATATGATTAAG AATTCGATTGAGATAAACACTACAGCTGGAACTACATTGATTGATCTTTATGTCAAGTGC GGGTGTTTAGAGGAAGCTATACTTGTTTTTGAGAGACTTCATGAGAAAAATGTGTATACT TGGACCGCGATGATTAATGGATTTGCAGCACACGGATATGCTAGAGATGCATTTGATCTC TTTTATACCATGTTGAGTAGTCATGTTTCACCAAATGAAGTTACTTTCATGGCTGTCTTA AGTGCCTGCGCTCATGGAGGTCTTGTGGAAGAGGGTCGAAGGCTTTTCCTGAGCATGAAG GGACGTTTCAATATGGAGCCAAAAGCGGATCACTATGCGTGTATGGTTGATTTATTTGGA AGAAAAGGTTTGCTAGAAGAGGCGAAAGCTTTGATAGAAAGAATGCCAATGGAGCCAACA AATGTGGTATGGGGAGCTCTGTTCGGCTCTTGTTTGTTACACAAAGACTATGAGTTAGGT AAATACGCAGCCTCCCGTGTGATCAAGCTGCAACCTAGTCATAGTGGGAGATACACTCTC TTGGCTAATTTGTACTCGGAATCCCAAAACTGGGATGAAGTCGCTCGGGTAAGAAAGCAA ATGAAAGATCAACAGGTGGTGAAATCGCCAGGATTTAGTTGGATCGAAGTGAAAGGCAAG CTTTGTGAATTCATAGCTTTCGATGATAAGAAACCCCTTGAATCTGATGATTTGTACAAG ACTCTCGACACTGTTGGGGTGCAAATGAGATTGCCAGATGAATTGGAAGATGTGACTGCT GAATCATGACTTGGGACGTTTACCATTTTCCTCATAAGCCTTCTCTGAAACTATCCATAA CCTTCAAATTATATCCTCCTTTAGTCTTCAACCTCTCGGCTAATTTCTCTGTTATCTCGA GATGCAATACTACAGGCTTCTTCTTCTCTTCTGAATATCTACAAGAAAAACTCTTGTTTG CAACTTTAACATCTGAAGTTGTGTGTTCTTGATTCCCACATCTGGACTTGAGTGCTTCAA TGGCGATTTCTGGAGGGATCTTAGGGTTTCTGGCGAGCTGTTTGCACGTCTCCATTGTTA GTTTCTTGTAGTTGAGACATCGACATATCTCTGTTCGATCTTGGGGTGTTAGATTCGGAT GAGACTGTACAATAACAAAACAACAGAAATTATAAAGGAATCAATCATACACTGACATAA TAATC