Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT1G49220.1
CDS Infomation

| RING/U-box superfamily protein | Chr1:18205946-18206701 FORWARD LENGTH=756 | 201606
Sequence

ATGTCTGCAAATGAGTTACCTTCTTCAGCTCAAGCCTTCCAAGAACAATTCCTTGGCGGT
TTTGTCTCTAGAAAGCTGCTTCTGCACAACCCATTTGACCACAACACTCAACGAGCCTTT
GCGGTTGCACCATCTCCTCTCATAACCCATGAGAACAACCTCAGTGGGAATGTTATGATG
CTTCTCTCAATCCTCATTTGTGGCATTATCTGCTGCCTCGGGTTACATTACATCATTCGT
TGTGCACTCAGACGTTCTACACGTTTCATGATCTCCGAGCCTGTACCAAGTCTTTCGTCA
ACACGGGGTTCATCAAACAAAGGAATCAAGAAGAAAGCTCTTAGAATGTTCCCAGTTGTG
AGTTACTCACCTGAGATGAACCTGCCAGGGCTTGACGAAGAGTGTGTCATTTGTTTGTCT
GATTTTGTTTCCGGTGAACAGCTCAGGCTGCTCCCCAAGTGTAACCACGGGTTCCATGTT
CGTTGCATAGACAAGTGGCTTCAACAACATCTGACTTGTCCAAAATGCAGAAACTGTCTG
GTTGAGACGTGCCAAAAGATATTAGGTGACTTCAGTCAAGCTGATTCAGTTACGGCAGAA
CCAACAGAGATCGTAATTGTCACGATTGTTCCTCTAGAACCAACAGAGATCGTAATTGTC
ACGATTGCTCCTCTAGAACCAACAGAGATCGTTATTGTCATGATTGCTCCGCTAGAACCT
GAAGGAAGAGTAAACACTATTAGAGAAATCAGCTAG

Peptide Sequence

PEP ID

AT1G49220.1
PEP Infomation

| RING/U-box superfamily protein | Chr1:18205946-18206701 FORWARD LENGTH=251 | 201606
Sequence

MSANELPSSAQAFQEQFLGGFVSRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSGNVMM
LLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMFPVV
SYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCL
VETCQKILGDFSQADSVTAEPTEIVIVTIVPLEPTEIVIVTIAPLEPTEIVIVMIAPLEP
EGRVNTIREIS

Transcript Sequence

Transcript ID

AT1G49220.1
Transcript Infomation

| RING/U-box superfamily protein | Chr1:18205934-18206701 FORWARD LENGTH=768 | 201606
Sequence

CAAAGAGTAAAAATGTCTGCAAATGAGTTACCTTCTTCAGCTCAAGCCTTCCAAGAACAA
TTCCTTGGCGGTTTTGTCTCTAGAAAGCTGCTTCTGCACAACCCATTTGACCACAACACT
CAACGAGCCTTTGCGGTTGCACCATCTCCTCTCATAACCCATGAGAACAACCTCAGTGGG
AATGTTATGATGCTTCTCTCAATCCTCATTTGTGGCATTATCTGCTGCCTCGGGTTACAT
TACATCATTCGTTGTGCACTCAGACGTTCTACACGTTTCATGATCTCCGAGCCTGTACCA
AGTCTTTCGTCAACACGGGGTTCATCAAACAAAGGAATCAAGAAGAAAGCTCTTAGAATG
TTCCCAGTTGTGAGTTACTCACCTGAGATGAACCTGCCAGGGCTTGACGAAGAGTGTGTC
ATTTGTTTGTCTGATTTTGTTTCCGGTGAACAGCTCAGGCTGCTCCCCAAGTGTAACCAC
GGGTTCCATGTTCGTTGCATAGACAAGTGGCTTCAACAACATCTGACTTGTCCAAAATGC
AGAAACTGTCTGGTTGAGACGTGCCAAAAGATATTAGGTGACTTCAGTCAAGCTGATTCA
GTTACGGCAGAACCAACAGAGATCGTAATTGTCACGATTGTTCCTCTAGAACCAACAGAG
ATCGTAATTGTCACGATTGCTCCTCTAGAACCAACAGAGATCGTTATTGTCATGATTGCT
CCGCTAGAACCTGAAGGAAGAGTAAACACTATTAGAGAAATCAGCTAG