Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G48950.1
CDS Infomation	\| C3HC zinc finger-like protein \| Chr1:18107063-18110108 FORWARD LENGTH=1785 \| 201606
Sequence	ATGGCACAAGATTCAGAGAAGAGATTCCACCAAATCATGGATAAACTCTTTACCCCATCG AAATCTCAGCTTCCTTCTTCCTCCACCAGTTCTTCTGTAGAGCAACAATCAAGAGGCAAG AAGCGTCAAAATCCTTCATCTGCGTTAGCATTGGTTGAGCCAAAGATTGTATTAGCTACC ATTGATAGGTCTTCAGCTTTGAAGGTTCCTGCTGGAACATCGCCTTCTGGTCTTTGCAGG CCGTGGGATAGAGGAGATCTTATGAGGAGGCTTGCTACTTTCAAGTCCATGACTTGGTTT GCCAAGCCACAGGTTATTAGTGCTGTAAATTGTGCGAGGAGAGGGTGGGTGAATGATGAC GCAGATTCTATAGCTTGTGAATCTTGTGGAGCTCATCTTTACTTTTCAGCCCCATCTTCT TGGTCTAAGCAACAAGTGGAAAAAGCGGCATCAGTCTTCAGCTTAAAGTTAGAGAGTGGA CACAAATTACTTTGTCCATGGATAGAGAATTCATGTGAAGAAACGCTTTCTGAGTTTCCG TTAATGGCACCGCAGGATTTAGTCGATAGACACGAAGAACGGTCAGAAGCTTTACTTCAA CTTTTGGCCCTTCCTGTTATTTCACCATCAGCCATTGAGTACATGAGGAGCTCAGATCTG GAGGAATTTCTCAAACGACCTATTGCACCTGCATGTAGTGACACAGCAGCAGAAAGTTCT CAAACTGAATCCCTTACCAATCATGTTGGAGCGAGCCCGGCTCAACTTTTCTACCAGGCA CAAAAACTTATCAGTTTATGTGGCTGGGAACCGCGGGCACTTCCTTATATTGTGGACTGC AAAGATAAATTGAGTGAGACGGCTAGGGGTACAGAGACTATTGATTTACTGCCAGAAACT GCTACCCGCGAGCTTCTAAGCATCTCTGAATCAACCCCAATTCCAAATGGCATATCAGGG AATAATGAGAACCCAACACTTCCTGACACATTAAACTCTGATCCTAGTTCTGTTGTACTG GACTGCAAGCTCTGTGGGGCCTGTGTTGGTCTATGGGTTTTCTCAACTGTTCCGAGACCA CTAGAATTGTGTAGAGTCACTGGTGATACCGAAATCAATATAGAGAAACATCCCAAGGGT GGTACCCTTCAACATCAACCTTCAAGCTTGAAGTTTACCATAGCAGGAGGACCCCCAGCA ACAAAGCAAAACTTCAAAGCAACAATATCGCTGCCTATTATCGGGAGGAACCTGAGGTCA AGATTTGCTTCGTACTCTAGAGATCATGATCACGGGGATGTCAGTTCTATTCAGGATCAA CAGAGTAGAACTGCAGAGAACAACGGTGATGTTACACAAAATAGCAATCAAGTGATGAAT GATATAGGAGAGAAGGCTGATGGTGGAAGAAACTCAACTGATGTAGAGAGTGATATTGCA CTACAAAACAAAGACAAACAAATGATGGTAGTAAGATCAAATCTTCCTGAAAACAACAAA CCTAGGGATTCAACTGCAGAAAAATCAGCGACATCAAACAAACAGATGGAATTTGATCCA ATCAAGCAACATAGGCATTTCTGTCCTTGGATCTGGTCAACGGGTAGAAGAGGCCCTGGA TGGCGACAGACTCTGTCTGCATTACAACGGCATAAAGGATCTTGTCAGACTCCACCATCA TCCTCTTCCCTCTTCAAGGTAGATGATCCGTTAACATCTGTTCGAAACCTATTTAAGTCG CCATCCCCGAAAAAACGAAAGCTGAACGGAGGATCTTCAAGCTGA

Peptide Sequence

PEP ID	AT1G48950.1
PEP Infomation	\| C3HC zinc finger-like protein \| Chr1:18107063-18110108 FORWARD LENGTH=594 \| 201606
Sequence	MAQDSEKRFHQIMDKLFTPSKSQLPSSSTSSSVEQQSRGKKRQNPSSALALVEPKIVLAT IDRSSALKVPAGTSPSGLCRPWDRGDLMRRLATFKSMTWFAKPQVISAVNCARRGWVNDD ADSIACESCGAHLYFSAPSSWSKQQVEKAASVFSLKLESGHKLLCPWIENSCEETLSEFP LMAPQDLVDRHEERSEALLQLLALPVISPSAIEYMRSSDLEEFLKRPIAPACSDTAAESS QTESLTNHVGASPAQLFYQAQKLISLCGWEPRALPYIVDCKDKLSETARGTETIDLLPET ATRELLSISESTPIPNGISGNNENPTLPDTLNSDPSSVVLDCKLCGACVGLWVFSTVPRP LELCRVTGDTEINIEKHPKGGTLQHQPSSLKFTIAGGPPATKQNFKATISLPIIGRNLRS RFASYSRDHDHGDVSSIQDQQSRTAENNGDVTQNSNQVMNDIGEKADGGRNSTDVESDIA LQNKDKQMMVVRSNLPENNKPRDSTAEKSATSNKQMEFDPIKQHRHFCPWIWSTGRRGPG WRQTLSALQRHKGSCQTPPSSSSLFKVDDPLTSVRNLFKSPSPKKRKLNGGSSS

Transcript Sequence

Transcript ID	AT1G48950.1
Transcript Infomation	\| C3HC zinc finger-like protein \| Chr1:18106860-18110386 FORWARD LENGTH=2266 \| 201606
Sequence	AATAAATATGAAGAGGACTAAACGACAGCAGATCCCGTCGTTTTCGTGTTGTTCCGTCAC CGCCATCTAAACACCACTCCTTCACCTGAGCCGCGGCGAAGAAGGTGGAAGCGAATCTAT TAGATTAGGGTTTATACGATTATAGGAGGACGAAATCAGAAAGACGAGCTAGAGGAAGCT GCGATTTTTCTGGAAGATAAACAATGGCACAAGATTCAGAGAAGAGATTCCACCAAATCA TGGATAAACTCTTTACCCCATCGAAATCTCAGCTTCCTTCTTCCTCCACCAGTTCTTCTG TAGAGCAACAATCAAGAGGCAAGAAGCGTCAAAATCCTTCATCTGCGTTAGCATTGGTTG AGCCAAAGATTGTATTAGCTACCATTGATAGGTCTTCAGCTTTGAAGGTTCCTGCTGGAA CATCGCCTTCTGGTCTTTGCAGGCCGTGGGATAGAGGAGATCTTATGAGGAGGCTTGCTA CTTTCAAGTCCATGACTTGGTTTGCCAAGCCACAGGTTATTAGTGCTGTAAATTGTGCGA GGAGAGGGTGGGTGAATGATGACGCAGATTCTATAGCTTGTGAATCTTGTGGAGCTCATC TTTACTTTTCAGCCCCATCTTCTTGGTCTAAGCAACAAGTGGAAAAAGCGGCATCAGTCT TCAGCTTAAAGTTAGAGAGTGGACACAAATTACTTTGTCCATGGATAGAGAATTCATGTG AAGAAACGCTTTCTGAGTTTCCGTTAATGGCACCGCAGGATTTAGTCGATAGACACGAAG AACGGTCAGAAGCTTTACTTCAACTTTTGGCCCTTCCTGTTATTTCACCATCAGCCATTG AGTACATGAGGAGCTCAGATCTGGAGGAATTTCTCAAACGACCTATTGCACCTGCATGTA GTGACACAGCAGCAGAAAGTTCTCAAACTGAATCCCTTACCAATCATGTTGGAGCGAGCC CGGCTCAACTTTTCTACCAGGCACAAAAACTTATCAGTTTATGTGGCTGGGAACCGCGGG CACTTCCTTATATTGTGGACTGCAAAGATAAATTGAGTGAGACGGCTAGGGGTACAGAGA CTATTGATTTACTGCCAGAAACTGCTACCCGCGAGCTTCTAAGCATCTCTGAATCAACCC CAATTCCAAATGGCATATCAGGGAATAATGAGAACCCAACACTTCCTGACACATTAAACT CTGATCCTAGTTCTGTTGTACTGGACTGCAAGCTCTGTGGGGCCTGTGTTGGTCTATGGG TTTTCTCAACTGTTCCGAGACCACTAGAATTGTGTAGAGTCACTGGTGATACCGAAATCA ATATAGAGAAACATCCCAAGGGTGGTACCCTTCAACATCAACCTTCAAGCTTGAAGTTTA CCATAGCAGGAGGACCCCCAGCAACAAAGCAAAACTTCAAAGCAACAATATCGCTGCCTA TTATCGGGAGGAACCTGAGGTCAAGATTTGCTTCGTACTCTAGAGATCATGATCACGGGG ATGTCAGTTCTATTCAGGATCAACAGAGTAGAACTGCAGAGAACAACGGTGATGTTACAC AAAATAGCAATCAAGTGATGAATGATATAGGAGAGAAGGCTGATGGTGGAAGAAACTCAA CTGATGTAGAGAGTGATATTGCACTACAAAACAAAGACAAACAAATGATGGTAGTAAGAT CAAATCTTCCTGAAAACAACAAACCTAGGGATTCAACTGCAGAAAAATCAGCGACATCAA ACAAACAGATGGAATTTGATCCAATCAAGCAACATAGGCATTTCTGTCCTTGGATCTGGT CAACGGGTAGAAGAGGCCCTGGATGGCGACAGACTCTGTCTGCATTACAACGGCATAAAG GATCTTGTCAGACTCCACCATCATCCTCTTCCCTCTTCAAGGTAGATGATCCGTTAACAT CTGTTCGAAACCTATTTAAGTCGCCATCCCCGAAAAAACGAAAGCTGAACGGAGGATCTT CAAGCTGAGACACCAGACGATTTTGTCCCTGAAAAAAACTTGAACCCTCTTGGTCTACAC TGTATCGAAATTTTGGAACTTGAAAAACTGTGATAATCATGTGTTATGCGTTATTTGTTG ATCCCTCAGAAAAGTAATCTATGTTGTTGTTGACGTATTTGACATTGCTAGAGCTTAAAA TCATTCACCTATTTGACATGGCTAGAGATTAAAATCATATGTTTACACATGAGTTTGTAC CGAACTATATCAAAGTCTTTGAAACATTAACAATACTCGACTTTGC