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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT1G48720.1
CDS Infomation

| Copia-like polyprotein/retrotransposon | Chr1:18018148-18018441 FORWARD LENGTH=294 | 201606
Sequence

ATGGCGAGTAACAATGTTCCCTTCCAAGTCCCGGTGCTCACAAAGAGCAACTATGATAAT
TGGAGTCTACGAATGAAGGCTATCCTAGGAGCACATGACGTGTGGGAGATAGTCGAGAAA
GGTTTCATTGAACCGGAGAATGAAGGTAGTCTTTCTCAAACTCAAAAAGATGGTTTGAGA
GACTCAAGAAAGAGAGACAAGAAAGCTCTCTGTCTAATCTATCAAGGATTAGATGAAGAT
ACGTTCGAGAAGGTCGTTGAAGCTACGTCGGCGAAAGATGGTTTGGGATTCTGA

Peptide Sequence

PEP ID

AT1G48720.1
PEP Infomation

| Copia-like polyprotein/retrotransposon | Chr1:18018148-18018441 FORWARD LENGTH=97 | 201606
Sequence

MASNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLR
DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKDGLGF

Transcript Sequence

Transcript ID

AT1G48720.1
Transcript Infomation

| Copia-like polyprotein/retrotransposon | Chr1:18017730-18018458 FORWARD LENGTH=729 | 201606
Sequence

CCAATAATTAATTATGGCCAAATCCAAGTTCTAGAGTTTTCTCTAGAAATATCATCATTT
CCACCTCCTTAAAAGATTCTAGAAATTTTCTAGAATCATCTTCCACCTCCTTAAACATAA
AAATCTAGATACTCTAATAGAATAATCTAGATAATTTGAATAATGTAATCTAGATCTTAT
GTAAGAACTCTCTAGACTTAGGATTAAAATATTTTAGATATTTTGTAGTTTGGAGGCTAT
AAATACTTCCTCCCCCTCTCAAATGTTGCAATGTTGTGAAGTTGTATTCAAGTTTAAAGC
AAAGTAATAAAAGTTCTATTTCCTAAAAAACTCTCTCAAAACACTTAAACACTTTCTCCA
TTACCTCTAAAAGAATTTTACTCTAACAAAGTGGTATCAGAGCTTGAAGATCCTAAAGAT
GGCGAGTAACAATGTTCCCTTCCAAGTCCCGGTGCTCACAAAGAGCAACTATGATAATTG
GAGTCTACGAATGAAGGCTATCCTAGGAGCACATGACGTGTGGGAGATAGTCGAGAAAGG
TTTCATTGAACCGGAGAATGAAGGTAGTCTTTCTCAAACTCAAAAAGATGGTTTGAGAGA
CTCAAGAAAGAGAGACAAGAAAGCTCTCTGTCTAATCTATCAAGGATTAGATGAAGATAC
GTTCGAGAAGGTCGTTGAAGCTACGTCGGCGAAAGATGGTTTGGGATTCTGATTTTGAGT
TTCCGTTGC