Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G48660.2
CDS Infomation	\| Auxin-responsive GH3 family protein \| Chr1:17995948-17997972 REVERSE LENGTH=1731 \| 201606
Sequence	ATGAGTTTAAGCGTTGAGCTCAAGGATTTGGAGGTCTTAACAACGAACGCAAAGCAAATA CAAGATGATGTATTGAAGGAGATACTCACACTTAACGCCAACACAGAGTATCTCAAACGT TTTCTCGATGGAAGCTCTGATAAAGAGTTGTTCAAGAAGAACGTACCGGTGGTGAGCTAC AATGATGTCAAGCCTTATATCGAACGTGTTGCGAATGGAGAGCCCTCGGATGTGATTTCA GGTGGAACCATTACAAGATTCGTCCAAAGCACGGGAACTTCAGGAGGGATACATAAAATA TTTCCAGTGAACGATAAGTACATAGAGAATCTTGGATACCTTTTGGCTGTATCCTCTCTC ATTACTTCCAAACATTTCAGTGACAAGGTAGATGAGAAAGGAAAGAAAATGGCGTTTCTT TACAACAGATTAGAATCCAAAACTCCCTCCGGATTAGCCCTTTCTTCATCATTTACAAGC TATTTCATGAGCGATTACTTCAAAAACCGGTCATCAAAATGTAATTCTGAGTACACAAGC CCCGACCAAGTCATATTGTGCCCCGACAACAACCAAAGTGTGTATTGTCATCTTCTATGT GGGCTTTCCCAGAGAGAAAAGGTTGTGGGAGTTAGTGCAACATTTGCTCATGCCTTAATC AAAGCAATAAATGCTCTTCAAATTTACTGGAAGGAATTGTCTAGTAATATCCGGTCAGGT CATGTTAGTGAGTGGATCACTGACCTTGACTGCAAAAATGCTGTCTCAGCCATTCTTGGA GGACCTGACCCTGAATTGGCTGATGTGATTGAACAAGAATGCAGCCACAAGTCATGGGAA GGTATCATCACACGACTTTGGCCCAAAGCAAAGTTTATTGAATGCATTGTTACAGGACAA ATGGCCCAATACATTCCAACATTGGACTTCTATTCCAACAAGCTTCCTATAGTTTCCATG GTATATGGGTCTTCTGAAAGTATATTTGGGGTGAATGTGGATCCTTTATCCAAACCACAA GATGTGTCCTACACATTTCTGCCCAATATCTCCTACTTTGAGTTTCTACCTATTGATCAT GAGGAAGATATGAACACCATTGTTGATCTTGTCGGTGTCAAGCTAGGGTGCTATTATGAA ACCGTGGTTACTAGTTATTTTGGTCTACACAGGTATCTTATTGGAGATATTCTACAGGTG ACTGGATTCTACAATAACACACCTCAATTTAGATTCGTACGCAGAAAGAATATTGTGTTA AGCGTCAATAGTGAAGCAACAACTGAACAGGACATTTTAAAGGGGTTGGCTAGTGCGACC CTTGTTCTTGAGTCTTCAAATTCAATGTTGACGGGTTTCACATGTTATGCGGATATCTCC AGTTTTCCAGGTCACTACGTCTTTTACTGGGAACTCAAAGCAAAAGATGTTGACGATGTT GTTGAGCTTGATGAAAATGTATTGGAAGAATGTTGCTATGCGTTAGAGGAATCGTTTGAT GCTCTTTATAAAAGACTAAGGAGTAAAGAAGGGTCAATTGGAGCTCTAGAGATAAAAGTG GTGCAACAAGGAACATTTGATTCTCTCATGGAATATTTCATCTCCAAAGGTGGTTCGGTT GCTCAATACAAGACACCTATGTGTATCAACTCTTCGGAAACCTTAGCAGTTCTTGAAGAT AAGGTTATTGCTCGATTCTACAGCCAAAAATCTCCTCCTCTTAACTTATAG

Peptide Sequence

PEP ID	AT1G48660.2
PEP Infomation	\| Auxin-responsive GH3 family protein \| Chr1:17995948-17997972 REVERSE LENGTH=576 \| 201606
Sequence	MSLSVELKDLEVLTTNAKQIQDDVLKEILTLNANTEYLKRFLDGSSDKELFKKNVPVVSY NDVKPYIERVANGEPSDVISGGTITRFVQSTGTSGGIHKIFPVNDKYIENLGYLLAVSSL ITSKHFSDKVDEKGKKMAFLYNRLESKTPSGLALSSSFTSYFMSDYFKNRSSKCNSEYTS PDQVILCPDNNQSVYCHLLCGLSQREKVVGVSATFAHALIKAINALQIYWKELSSNIRSG HVSEWITDLDCKNAVSAILGGPDPELADVIEQECSHKSWEGIITRLWPKAKFIECIVTGQ MAQYIPTLDFYSNKLPIVSMVYGSSESIFGVNVDPLSKPQDVSYTFLPNISYFEFLPIDH EEDMNTIVDLVGVKLGCYYETVVTSYFGLHRYLIGDILQVTGFYNNTPQFRFVRRKNIVL SVNSEATTEQDILKGLASATLVLESSNSMLTGFTCYADISSFPGHYVFYWELKAKDVDDV VELDENVLEECCYALEESFDALYKRLRSKEGSIGALEIKVVQQGTFDSLMEYFISKGGSV AQYKTPMCINSSETLAVLEDKVIARFYSQKSPPLNL

Transcript Sequence

Transcript ID	AT1G48660.2
Transcript Infomation	\| Auxin-responsive GH3 family protein \| Chr1:17995785-17998037 REVERSE LENGTH=1959 \| 201606
Sequence	ACTAGAGATTAAAAAAAAAACATATACATTAAAGTGAACTAGAGAACTAGAGAACAAAAC CAAATATGAGTTTAAGCGTTGAGCTCAAGGATTTGGAGGTCTTAACAACGAACGCAAAGC AAATACAAGATGATGTATTGAAGGAGATACTCACACTTAACGCCAACACAGAGTATCTCA AACGTTTTCTCGATGGAAGCTCTGATAAAGAGTTGTTCAAGAAGAACGTACCGGTGGTGA GCTACAATGATGTCAAGCCTTATATCGAACGTGTTGCGAATGGAGAGCCCTCGGATGTGA TTTCAGGTGGAACCATTACAAGATTCGTCCAAAGCACGGGAACTTCAGGAGGGATACATA AAATATTTCCAGTGAACGATAAGTACATAGAGAATCTTGGATACCTTTTGGCTGTATCCT CTCTCATTACTTCCAAACATTTCAGTGACAAGGTAGATGAGAAAGGAAAGAAAATGGCGT TTCTTTACAACAGATTAGAATCCAAAACTCCCTCCGGATTAGCCCTTTCTTCATCATTTA CAAGCTATTTCATGAGCGATTACTTCAAAAACCGGTCATCAAAATGTAATTCTGAGTACA CAAGCCCCGACCAAGTCATATTGTGCCCCGACAACAACCAAAGTGTGTATTGTCATCTTC TATGTGGGCTTTCCCAGAGAGAAAAGGTTGTGGGAGTTAGTGCAACATTTGCTCATGCCT TAATCAAAGCAATAAATGCTCTTCAAATTTACTGGAAGGAATTGTCTAGTAATATCCGGT CAGGTCATGTTAGTGAGTGGATCACTGACCTTGACTGCAAAAATGCTGTCTCAGCCATTC TTGGAGGACCTGACCCTGAATTGGCTGATGTGATTGAACAAGAATGCAGCCACAAGTCAT GGGAAGGTATCATCACACGACTTTGGCCCAAAGCAAAGTTTATTGAATGCATTGTTACAG GACAAATGGCCCAATACATTCCAACATTGGACTTCTATTCCAACAAGCTTCCTATAGTTT CCATGGTATATGGGTCTTCTGAAAGTATATTTGGGGTGAATGTGGATCCTTTATCCAAAC CACAAGATGTGTCCTACACATTTCTGCCCAATATCTCCTACTTTGAGTTTCTACCTATTG ATCATGAGGAAGATATGAACACCATTGTTGATCTTGTCGGTGTCAAGCTAGGGTGCTATT ATGAAACCGTGGTTACTAGTTATTTTGGTCTACACAGGTATCTTATTGGAGATATTCTAC AGGTGACTGGATTCTACAATAACACACCTCAATTTAGATTCGTACGCAGAAAGAATATTG TGTTAAGCGTCAATAGTGAAGCAACAACTGAACAGGACATTTTAAAGGGGTTGGCTAGTG CGACCCTTGTTCTTGAGTCTTCAAATTCAATGTTGACGGGTTTCACATGTTATGCGGATA TCTCCAGTTTTCCAGGTCACTACGTCTTTTACTGGGAACTCAAAGCAAAAGATGTTGACG ATGTTGTTGAGCTTGATGAAAATGTATTGGAAGAATGTTGCTATGCGTTAGAGGAATCGT TTGATGCTCTTTATAAAAGACTAAGGAGTAAAGAAGGGTCAATTGGAGCTCTAGAGATAA AAGTGGTGCAACAAGGAACATTTGATTCTCTCATGGAATATTTCATCTCCAAAGGTGGTT CGGTTGCTCAATACAAGACACCTATGTGTATCAACTCTTCGGAAACCTTAGCAGTTCTTG AAGATAAGGTTATTGCTCGATTCTACAGCCAAAAATCTCCTCCTCTTAACTTATAGTTCT TTGTATTATAATTTCTTTTAAAAGTCTTGGAAAACAACATGAAACAAAGCACTTATGTTG TTTGTATGCCTATATATGGTTGCATGTTATAATAACGGAAACGCGTGTAAGTAATGTTAT TTATAAACATTTTCACAACTAGCACCACAATTAGTCCAT