Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G48280.1
CDS Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr1:17835196-17837553 FORWARD LENGTH=1677 \| 201606
Sequence	ATGTCCCGCATTTCCACCACCTCCACTACTCCTTCACGCGTGAGAGCTGCGAATTCGCAC TACTCAGTGATCTCTAAACCTAGAGCACAAGACGATAACGGTCTCACCGGAGGTAAACCG AAATCGTCAGGTTACGATGTGAAAAATGATCCAGCGAAACGGCGATCAATTCTGCTGAAA AGAGCGAAATCTGCAGAGGAGGAGATGGCGGTTTTGGCTCCTCAGAGAGCTCGGTCTGTG AATCGTCCGGCGGTTGTAGAGCAATTCGGTTGTCCGAGGCGGCCGATTTCTCGAAAAAGC GAAGAGACGGTAATGGCTACAGCGGCGGCGGAGGATGAGAAGAGGAAGAGAATGGAGGAA TTGGAGGAGAAGCTGGTAGTGAATGAGTCGTTGATTAAGGATTTGCAGTTGCAGGTTTTG AATTTGAAAACGGAGTTAGAGGAAGCTCGTAATTCAAATGTAGAGCTTGAGTTGAATAAT AGGAAGCTTTCTCAGGATCTTGTTTCAGCTGAAGCTAAGATCTCATCTCTTTCTTCTAAC GACAAGCCAGCTAAAGAACATCAAAACAGCAGATTCAAAGATATCCAGAGGTTAATAGCT AGCAAATTAGAGCAACCCAAGGTTAAGAAGGAGGTAGCAGTAGAGTCATCAAGATTATCT CCACCATCACCTTCTCCTTCAAGATTACCGCCAACACCGCCATTACCGAAGTTTTTGGTG TCTCCAGCTAGCAGTTTAGGTAAAAGAGATGAAAATTCTTCACCCTTTGCACCTCCAACA CCACCGCCTCCGCCGCCACCACCACCACCTAGACCTCTTGCTAAAGCAGCTCGTGCTCAG AAGTCTCCTCCAGTTTCACAGCTATTTCAGTTGTTGAATAAGCAAGATAATAGTAGAAAC CTTTCTCAGTCTGTTAATGGGAATAAGTCTCAAGTTAACAGTGCTCACAACAGTATAGTC GGAGAAATTCAAAACCGTTCTGCGCATCTCATCGCTATAAAAGCTGATATAGAGACAAAA GGGGAGTTTATCAATGATCTTATCCAGAAAGTTCTGACCACTTGTTTTTCGGATATGGAA GATGTCATGAAATTTGTGGATTGGCTTGATAAAGAACTGGCAACTCTGGCTGATGAGCGT GCTGTGCTTAAGCATTTCAAGTGGCCTGAGAAGAAAGCCGATACCCTGCAAGAGGCTGCA GTTGAATACCGTGAGCTAAAGAAACTGGAAAAAGAACTTTCTTCCTACTCTGATGATCCG AACATTCACTACGGTGTTGCCCTGAAGAAAATGGCCAACTTACTAGACAAGTCGGAGCAG AGGATAAGGAGGCTAGTCAGATTACGTGGCTCATCCATGCGTTCTTACCAGGACTTTAAG ATCCCAGTCGAGTGGATGCTTGACTCGGGAATGATATGCAAGATCAAAAGAGCATCGATC AAACTTGCGAAAACCTACATGAATAGAGTAGCGAATGAGCTGCAATCAGCTCGTAACTTG GATAGAGAGTCTACTAAAGAAGCATTGCTTCTTCAAGGCGTCCGATTTGCTTACAGAACG CACCAGTTTGCGGGAGGGCTCGATCCAGAGACATTGTGTGCATTAGAAGAGATTAAGCAA CGTGTTCCGAGTCATCTCCGGCTGGCACGGGGGAATATGGCCGGAAATCTGTCGTAG

Peptide Sequence

PEP ID	AT1G48280.1
PEP Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr1:17835196-17837553 FORWARD LENGTH=558 \| 201606
Sequence	MSRISTTSTTPSRVRAANSHYSVISKPRAQDDNGLTGGKPKSSGYDVKNDPAKRRSILLK RAKSAEEEMAVLAPQRARSVNRPAVVEQFGCPRRPISRKSEETVMATAAAEDEKRKRMEE LEEKLVVNESLIKDLQLQVLNLKTELEEARNSNVELELNNRKLSQDLVSAEAKISSLSSN DKPAKEHQNSRFKDIQRLIASKLEQPKVKKEVAVESSRLSPPSPSPSRLPPTPPLPKFLV SPASSLGKRDENSSPFAPPTPPPPPPPPPPRPLAKAARAQKSPPVSQLFQLLNKQDNSRN LSQSVNGNKSQVNSAHNSIVGEIQNRSAHLIAIKADIETKGEFINDLIQKVLTTCFSDME DVMKFVDWLDKELATLADERAVLKHFKWPEKKADTLQEAAVEYRELKKLEKELSSYSDDP NIHYGVALKKMANLLDKSEQRIRRLVRLRGSSMRSYQDFKIPVEWMLDSGMICKIKRASI KLAKTYMNRVANELQSARNLDRESTKEALLLQGVRFAYRTHQFAGGLDPETLCALEEIKQ RVPSHLRLARGNMAGNLS

Transcript Sequence

Transcript ID	AT1G48280.1
Transcript Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr1:17835032-17837781 FORWARD LENGTH=2069 \| 201606
Sequence	AGATTATTGAACTAATGATTGGTGATTAATAATATTGTTGTTGTTTTCTTCTGCGACAGC TTCGAAGTCGTCTCTTGGATTTTTACAAGTCAAAAGCTGAGTAAGACGTTAACCACGAGT CTTCTCGCCGGCGACCGTCGTCAACGGCGGAGATTTTGTTAGTTATGTCCCGCATTTCCA CCACCTCCACTACTCCTTCACGCGTGAGAGCTGCGAATTCGCACTACTCAGTGATCTCTA AACCTAGAGCACAAGACGATAACGGTCTCACCGGAGGTAAACCGAAATCGTCAGGTTACG ATGTGAAAAATGATCCAGCGAAACGGCGATCAATTCTGCTGAAAAGAGCGAAATCTGCAG AGGAGGAGATGGCGGTTTTGGCTCCTCAGAGAGCTCGGTCTGTGAATCGTCCGGCGGTTG TAGAGCAATTCGGTTGTCCGAGGCGGCCGATTTCTCGAAAAAGCGAAGAGACGGTAATGG CTACAGCGGCGGCGGAGGATGAGAAGAGGAAGAGAATGGAGGAATTGGAGGAGAAGCTGG TAGTGAATGAGTCGTTGATTAAGGATTTGCAGTTGCAGGTTTTGAATTTGAAAACGGAGT TAGAGGAAGCTCGTAATTCAAATGTAGAGCTTGAGTTGAATAATAGGAAGCTTTCTCAGG ATCTTGTTTCAGCTGAAGCTAAGATCTCATCTCTTTCTTCTAACGACAAGCCAGCTAAAG AACATCAAAACAGCAGATTCAAAGATATCCAGAGGTTAATAGCTAGCAAATTAGAGCAAC CCAAGGTTAAGAAGGAGGTAGCAGTAGAGTCATCAAGATTATCTCCACCATCACCTTCTC CTTCAAGATTACCGCCAACACCGCCATTACCGAAGTTTTTGGTGTCTCCAGCTAGCAGTT TAGGTAAAAGAGATGAAAATTCTTCACCCTTTGCACCTCCAACACCACCGCCTCCGCCGC CACCACCACCACCTAGACCTCTTGCTAAAGCAGCTCGTGCTCAGAAGTCTCCTCCAGTTT CACAGCTATTTCAGTTGTTGAATAAGCAAGATAATAGTAGAAACCTTTCTCAGTCTGTTA ATGGGAATAAGTCTCAAGTTAACAGTGCTCACAACAGTATAGTCGGAGAAATTCAAAACC GTTCTGCGCATCTCATCGCTATAAAAGCTGATATAGAGACAAAAGGGGAGTTTATCAATG ATCTTATCCAGAAAGTTCTGACCACTTGTTTTTCGGATATGGAAGATGTCATGAAATTTG TGGATTGGCTTGATAAAGAACTGGCAACTCTGGCTGATGAGCGTGCTGTGCTTAAGCATT TCAAGTGGCCTGAGAAGAAAGCCGATACCCTGCAAGAGGCTGCAGTTGAATACCGTGAGC TAAAGAAACTGGAAAAAGAACTTTCTTCCTACTCTGATGATCCGAACATTCACTACGGTG TTGCCCTGAAGAAAATGGCCAACTTACTAGACAAGTCGGAGCAGAGGATAAGGAGGCTAG TCAGATTACGTGGCTCATCCATGCGTTCTTACCAGGACTTTAAGATCCCAGTCGAGTGGA TGCTTGACTCGGGAATGATATGCAAGATCAAAAGAGCATCGATCAAACTTGCGAAAACCT ACATGAATAGAGTAGCGAATGAGCTGCAATCAGCTCGTAACTTGGATAGAGAGTCTACTA AAGAAGCATTGCTTCTTCAAGGCGTCCGATTTGCTTACAGAACGCACCAGTTTGCGGGAG GGCTCGATCCAGAGACATTGTGTGCATTAGAAGAGATTAAGCAACGTGTTCCGAGTCATC TCCGGCTGGCACGGGGGAATATGGCCGGAAATCTGTCGTAGAAAAGTAATCAGAGAAATG TGAGGCATATGGGCTGTGGTTCTGGCTACAAAATTCGTTATTTGTGTTAATAGTGTTTGG TGAGTCAGGTTGTGTCCCATTTAATAATAATGTTATAATGTATCTAAAATGTTCCTCCAG TGAATTACTCAATTAATTTTTGCGCTACATGACATAAATCATAAACATTTTAGAAGTTAC TAGGTCGACACCAAAGCAATATAGTTACA