Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT1G47570.1
CDS Infomation

| RING/U-box superfamily protein | Chr1:17478919-17483229 FORWARD LENGTH=1401 | 201606
Sequence

ATGACGACGACGGCGGAAACTGGGCAATCCTCTGGTTCGAAACCCTCTGATGATGATGCA
TGGGCCAAACTGGTTCCTCTGGACACCAGATTCTCTGACATTGAGATTAGGTGCAATGAT
ATGGTAATATGCTCTGAGATTAAACCGTCTTCCCTGGAAAAACATGAATGGTGCAGAATA
ACTAAGAATTTGGGTCAAAGTTCTGCCACTATACATAATAAGAGTTCGGATGCTATACTT
GTTGACAAGGCTGTTGTCCCGAAAGATGGTGCTGTTGATATCATTAGTGGATCTGAAATT
GTTCCTGGCCCTGAAGAACAAGGGTACTTGCAGTACAGATTTACAATAATGCCTGCTCCA
GAATCCAGAACCCAGCTATTACAGATTTCCATAGATCCTGAACATGCAAAATGCAGTATC
TGCTTAAACATATGGCATGATGTTGTCACAGCTGCACCTTGCCTTCATAATTTCTGTAAT
GGCTGTTTTTCAGAATGGATGCGGAGATCGGAGGAAAAACATAAACATGTGTTATGTCCA
CAGTGCAGAACAACAGTACAATATGTGGGAAAAAATCATTTTCTGAAGAACATACAAGAG
GAAATATTAAAAGTGGATGCTGCACTGAGGCGACCAGCTGAAGATATTGCAGTGTTGGAC
TCATCTGCATCGATACAATCAAATCTTATCATTGGGAGCAAGAGAAAACGTCGATTGAAT
ATGCCTGCGCCCACACATGAAGAAAGAGATAGCTTGCGTTTGCAATGCCCACAATGTGTT
GCTAATATTGGTGGTTATCGGTGTGAACATCATGGTGCACATCTGCAATGCCACCTGTGT
CAAGGAATGATGCCCTTTAGAGCCAATCTCCAAGTGCCGTTACACTGCAAGGGATGCGAT
AGGCCGTTTTGCGGTGCTTACTGGAGTTCCGAGAATGTTACACAAGGTGTATCTGGTCCA
GTCTGCGTTCGCGAAACTTTTAGACCTATCTCGGAACGCACAATTACAAGGATTCCATTC
ATAACCCATGAAATGAATCGCCATGAACAAGATATAACGCAAAGATGCATTGCCCATATG
GAGAAAACTGTGCCGGATGTTGTAGCAGAGTGGCTCAGGCTTTTCAACAATAGAGAAATA
GACCGCTCGAGAATGCCTCTGAATCATGCTGAGACGATAACTGCATCAACACATGTTTGC
AATGATTGTTATGATAAGCTGGTGGGATTCCTTTTATACTGGTTCCGGATAACACTGCCG
AGAAATCATTTGCCAGCGGATGTAGCGGCTAGGGAAGATTGTTGGTATGGATACGCATGT
AGGACACAACACCACAACGAAGATCATGCTCGTAAACGTAACCATGTATGTCGCCCTACC
AGAGGGAACCATCACTTTTAG

Peptide Sequence

PEP ID

AT1G47570.1
PEP Infomation

| RING/U-box superfamily protein | Chr1:17478919-17483229 FORWARD LENGTH=466 | 201606
Sequence

MTTTAETGQSSGSKPSDDDAWAKLVPLDTRFSDIEIRCNDMVICSEIKPSSLEKHEWCRI
TKNLGQSSATIHNKSSDAILVDKAVVPKDGAVDIISGSEIVPGPEEQGYLQYRFTIMPAP
ESRTQLLQISIDPEHAKCSICLNIWHDVVTAAPCLHNFCNGCFSEWMRRSEEKHKHVLCP
QCRTTVQYVGKNHFLKNIQEEILKVDAALRRPAEDIAVLDSSASIQSNLIIGSKRKRRLN
MPAPTHEERDSLRLQCPQCVANIGGYRCEHHGAHLQCHLCQGMMPFRANLQVPLHCKGCD
RPFCGAYWSSENVTQGVSGPVCVRETFRPISERTITRIPFITHEMNRHEQDITQRCIAHM
EKTVPDVVAEWLRLFNNREIDRSRMPLNHAETITASTHVCNDCYDKLVGFLLYWFRITLP
RNHLPADVAAREDCWYGYACRTQHHNEDHARKRNHVCRPTRGNHHF

Transcript Sequence

Transcript ID

AT1G47570.1
Transcript Infomation

| RING/U-box superfamily protein | Chr1:17477579-17483502 FORWARD LENGTH=3014 | 201606
Sequence

CGGAAAGCTAAGACGACGCACATAGACATGAAACCCTCCTCTGAAGTTTTCTCCCTTCTC
TCTCCTCAAGTAGCTCTCAAGTCTTCGCTGTTTTTTGGTCGGAGATTAACGTTTGGTGGC
TCCTATAGCACCAACGTTGATCTTCTTTCAGTTTATGTTTGTTTCTTTACTTATCCTCGC
AGTTGCAGTTTACCGTTTTGGTATTTTGTCGTCCGATTTTAAGATCTCGATTAGTTGGGT
TGTCTTATGACAACCAATGACTTTATTGTGGTGTTAGATCGGCTTTCGTCCAATATCGTT
CGGCTCACATAGTGACGATGATTGGTTTGCTTTTGACGCTTCCTTGCCACTTTGCTTTCG
GTTTCTTTTATCCGATATAGTTGTTGTTTTTTATGAATAATCTTCATGGTTAACAAGCTT
TTGGTTTTCGAGATTCAGATTGGGAGAGTTTCTAATGCAAAATCTATATGATTGACGATG
TAGGCTTGTTAAAGTTGTCTCTGTTATCGTCTCTCTTCGTTCTCTCCGGAAAATCTATTT
CTTTTGCCAACATGGTTGCTTTGCCGTGTGGGTGTTGTTGAAAGTTCAGTTGGTTTACTC
TCTATGTTGATGTCCTTCAGATTTTGAGAAACAATTGCCTGGGGAAGATTGCAGATTTGA
TGCTGAAGATTATGGGTTTCTCTAATTAAAAACCGATGGACTTCTGTGCTTGAAGCTCTA
GCGGTTTCCGGTGGTTTTGGAGGTGCCTTTCGTTGCTTATCAAATCGACGATGAACGGCG
ATGACTTATGCGTCATCTGTCCTCGGGTCTCAACTTTGTCGACGACTATTACTTCCTTAC
AGGAATTAGTTTTCTCTGGTGGGCTTTCATTAATTTGGGCATGTGTTTAAAAGCTTAATG
TTGTGAAGATGGATGTCAAAATGTAAGTGGAAGTTTCCACTGTTATATATTTTGCAACAC
TAGATAAAGTACAATACTTATGAGAAAAAATAAAAATAATTATAAAAGCGTTTAACCCGG
TTTAGTTCGATTCGGTTTAATAAAGAGATTATCTCAAAACAAAACAAAATTCGCATATCG
CCGATTATTCAAATCGGTAACGTACGGTCTCATTTGAGATATTCCGGTGTGTGCAACAGT
TACACCAATTAAACCTTTTCCTTAAAAAATAAAAATGGAGAGATTCTTCTACAGAGAGAA
ACCCTAAAGACCAAAATAGGAATCGTGCCTATCACTCTCTTTCTCGAATCATCTTCTTCC
TCGCGAAGAGACTTCCTTTAGTTTCTGTTGAAATCTCTTATTTGCGGTGATGAACTTTGA
AATTTGATTCCAGAAGTCCGATGACGACGACGGCGGAAACTGGGCAATCCTCTGGTTCGA
AACCCTCTGATGATGATGCATGGGCCAAACTGGTTCCTCTGGACACCAGATTCTCTGACA
TTGAGATTAGGTGCAATGATATGGTAATATGCTCTGAGATTAAACCGTCTTCCCTGGAAA
AACATGAATGGTGCAGAATAACTAAGAATTTGGGTCAAAGTTCTGCCACTATACATAATA
AGAGTTCGGATGCTATACTTGTTGACAAGGCTGTTGTCCCGAAAGATGGTGCTGTTGATA
TCATTAGTGGATCTGAAATTGTTCCTGGCCCTGAAGAACAAGGGTACTTGCAGTACAGAT
TTACAATAATGCCTGCTCCAGAATCCAGAACCCAGCTATTACAGATTTCCATAGATCCTG
AACATGCAAAATGCAGTATCTGCTTAAACATATGGCATGATGTTGTCACAGCTGCACCTT
GCCTTCATAATTTCTGTAATGGCTGTTTTTCAGAATGGATGCGGAGATCGGAGGAAAAAC
ATAAACATGTGTTATGTCCACAGTGCAGAACAACAGTACAATATGTGGGAAAAAATCATT
TTCTGAAGAACATACAAGAGGAAATATTAAAAGTGGATGCTGCACTGAGGCGACCAGCTG
AAGATATTGCAGTGTTGGACTCATCTGCATCGATACAATCAAATCTTATCATTGGGAGCA
AGAGAAAACGTCGATTGAATATGCCTGCGCCCACACATGAAGAAAGAGATAGCTTGCGTT
TGCAATGCCCACAATGTGTTGCTAATATTGGTGGTTATCGGTGTGAACATCATGGTGCAC
ATCTGCAATGCCACCTGTGTCAAGGAATGATGCCCTTTAGAGCCAATCTCCAAGTGCCGT
TACACTGCAAGGGATGCGATAGGCCGTTTTGCGGTGCTTACTGGAGTTCCGAGAATGTTA
CACAAGGTGTATCTGGTCCAGTCTGCGTTCGCGAAACTTTTAGACCTATCTCGGAACGCA
CAATTACAAGGATTCCATTCATAACCCATGAAATGAATCGCCATGAACAAGATATAACGC
AAAGATGCATTGCCCATATGGAGAAAACTGTGCCGGATGTTGTAGCAGAGTGGCTCAGGC
TTTTCAACAATAGAGAAATAGACCGCTCGAGAATGCCTCTGAATCATGCTGAGACGATAA
CTGCATCAACACATGTTTGCAATGATTGTTATGATAAGCTGGTGGGATTCCTTTTATACT
GGTTCCGGATAACACTGCCGAGAAATCATTTGCCAGCGGATGTAGCGGCTAGGGAAGATT
GTTGGTATGGATACGCATGTAGGACACAACACCACAACGAAGATCATGCTCGTAAACGTA
ACCATGTATGTCGCCCTACCAGAGGGAACCATCACTTTTAGTCCGCTTTTCATCTTTTCT
TTTGATTATATTTTGGGATATTCTGTATGAGTAGTTAGAAACTGTTCCTTGAATAGTTAT
CAAAATGGATTATTTTGTCATCTGCTATATAGAAGATGGTGTCGGGTCAGACCTTTATTT
CTGACATACCAATCAGATCAACCGTTTTCTTAGCAAATGTATTAACAATCTTATGAATTA
GCCATTTTGTGTGTTTCAAAACTTTCAATTGCCAATAAAAATTTAACTACAATATCAAAA
TGATTCGTTGCGTT